RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 RHBDD1Q8TEB9 315 aa16.33■□□□□ 0.2
CACNB3-220ENST00000551716 DNASE2BQ8WZ79 361 aa16.33■□□□□ 0.2
CACNB3-220ENST00000551716 LLPHQ9BRT6 129 aaKnown RBP16.33■□□□□ 0.2
CACNB3-220ENST00000551716 SMPD4Q9NXE4 827 aa16.33■□□□□ 0.2
CACNB3-220ENST00000551716 TSC2P49815 1807 aa16.33■□□□□ 0.2
CACNB3-220ENST00000551716 ANKRD63C9JTQ0 380 aa16.32■□□□□ 0.2
CACNB3-220ENST00000551716 CAPN9O14815 690 aa16.32■□□□□ 0.2
CACNB3-220ENST00000551716 TRIM66O15016 1216 aa16.32■□□□□ 0.2
CACNB3-220ENST00000551716 FLRT2O43155 660 aa16.32■□□□□ 0.2
CACNB3-220ENST00000551716 HOXC11O43248 304 aaPredicted RBP16.32■□□□□ 0.2
CACNB3-220ENST00000551716 TULP3O75386 442 aa16.32■□□□□ 0.2
CACNB3-220ENST00000551716 ABL1P00519 1130 aa16.32■□□□□ 0.2
CACNB3-220ENST00000551716 POLR2BP30876 1174 aaKnown RBP16.32■□□□□ 0.2
CACNB3-220ENST00000551716 SCN1AP35498 2009 aa16.32■□□□□ 0.2
CACNB3-220ENST00000551716 NOP14P78316 857 aaKnown RBP16.32■□□□□ 0.2
CACNB3-220ENST00000551716 TFAMQ00059 246 aaKnown RBP16.32■□□□□ 0.2
CACNB3-220ENST00000551716 TDRD10Q5VZ19 366 aaKnown RBP16.32■□□□□ 0.2
CACNB3-220ENST00000551716 DBX2Q6ZNG2 339 aa16.32■□□□□ 0.2
CACNB3-220ENST00000551716 ETFBKMTQ8IXQ9 262 aa16.32■□□□□ 0.2
CACNB3-220ENST00000551716 CHPFQ8IZ52 775 aa16.32■□□□□ 0.2
CACNB3-220ENST00000551716 ADGRF2Q8IZF7 708 aa16.32■□□□□ 0.2
CACNB3-220ENST00000551716 CSGALNACT2Q8N6G5 542 aa16.32■□□□□ 0.2
CACNB3-220ENST00000551716 ENGASEQ8NFI3 743 aa16.32■□□□□ 0.2
CACNB3-220ENST00000551716 CADM4Q8NFZ8 388 aa16.32■□□□□ 0.2
CACNB3-220ENST00000551716 IPO4Q8TEX9 1081 aaKnown RBP16.32■□□□□ 0.2
CACNB3-220ENST00000551716 SLITRK1Q96PX8 696 aa16.32■□□□□ 0.2
CACNB3-220ENST00000551716 DUSP9Q99956 384 aaKnown RBP16.32■□□□□ 0.2
CACNB3-220ENST00000551716 REEP2Q9BRK0 252 aa16.32■□□□□ 0.2
CACNB3-220ENST00000551716 GAREM1Q9H706 876 aa16.32■□□□□ 0.2
CACNB3-220ENST00000551716 TM7SF3Q9NS93 570 aa16.32■□□□□ 0.2
CACNB3-220ENST00000551716 ITGA11Q9UKX5 1188 aa16.32■□□□□ 0.2
CACNB3-220ENST00000551716 CDH9Q9ULB4 789 aa16.32■□□□□ 0.2
CACNB3-220ENST00000551716 R3HCC1Q9Y3T6 440 aaKnown RBP16.32■□□□□ 0.2
CACNB3-220ENST00000551716 SNX9Q9Y5X1 595 aa16.32■□□□□ 0.2
CACNB3-220ENST00000551716 OBSL1O75147 1896 aa16.31■□□□□ 0.2
CACNB3-220ENST00000551716 OAS1P00973 400 aaKnown RBP16.31■□□□□ 0.2
CACNB3-220ENST00000551716 ITGB3P05106 788 aa16.31■□□□□ 0.2
CACNB3-220ENST00000551716 MBL2P11226 248 aaPredicted RBP16.31■□□□□ 0.2
CACNB3-220ENST00000551716 PLA2G2AP14555 144 aa16.31■□□□□ 0.2
CACNB3-220ENST00000551716 NDUFV2P19404 249 aa16.31■□□□□ 0.2
CACNB3-220ENST00000551716 CD6P30203 668 aa16.31■□□□□ 0.2
CACNB3-220ENST00000551716 MATKP42679 507 aa16.31■□□□□ 0.2
CACNB3-220ENST00000551716 TOB1P50616 345 aaPredicted RBP16.31■□□□□ 0.2
CACNB3-220ENST00000551716 RBP5P82980 135 aa16.31■□□□□ 0.2
CACNB3-220ENST00000551716 METTL3Q86U44 580 aaKnown RBP16.31■□□□□ 0.2
CACNB3-220ENST00000551716 NAT16Q8N8M0 369 aa16.31■□□□□ 0.2
CACNB3-220ENST00000551716 TERB1Q8NA31 727 aa16.31■□□□□ 0.2
CACNB3-220ENST00000551716 BAHD1Q8TBE0 780 aaPredicted RBP16.31■□□□□ 0.2
CACNB3-220ENST00000551716 POMGNT1Q8WZA1 660 aa16.31■□□□□ 0.2
CACNB3-220ENST00000551716 PLIN2Q99541 437 aa16.31■□□□□ 0.2
CACNB3-220ENST00000551716 ADAMTS9Q9P2N4 1935 aa16.31■□□□□ 0.2
CACNB3-220ENST00000551716 PLXNB3Q9ULL4 1909 aa16.31■□□□□ 0.2
CACNB3-220ENST00000551716 MEI4A8MW99 385 aa16.3■□□□□ 0.2
CACNB3-220ENST00000551716 GFRA2O00451 464 aa16.3■□□□□ 0.2
CACNB3-220ENST00000551716 PRB1P04280 392 aa16.3■□□□□ 0.2
CACNB3-220ENST00000551716 KRT18P05783 430 aaKnown RBP16.3■□□□□ 0.2
CACNB3-220ENST00000551716 ATXN1LP0C7T5 689 aaKnown RBP16.3■□□□□ 0.2
CACNB3-220ENST00000551716 BDNFP23560 247 aa16.3■□□□□ 0.2
CACNB3-220ENST00000551716 USP46P62068 366 aa16.3■□□□□ 0.2
CACNB3-220ENST00000551716 HMGN5P82970 282 aaKnown RBP16.3■□□□□ 0.2
CACNB3-220ENST00000551716 MYO1EQ12965 1108 aa16.3■□□□□ 0.2
CACNB3-220ENST00000551716 CAMK2BQ13554 666 aa16.3■□□□□ 0.2
CACNB3-220ENST00000551716 CRELD2Q6UXH1 353 aaPredicted RBP16.3■□□□□ 0.2
CACNB3-220ENST00000551716 LRRC69Q6ZNQ3 347 aa16.3■□□□□ 0.2
CACNB3-220ENST00000551716 GPBP1Q86WP2 473 aa16.3■□□□□ 0.2
CACNB3-220ENST00000551716 C8orf48Q96LL4 319 aa16.3■□□□□ 0.2
CACNB3-220ENST00000551716 GABRG3Q99928 467 aa16.3■□□□□ 0.2
CACNB3-220ENST00000551716 ST6GALNAC4Q9H4F1 302 aa16.3■□□□□ 0.2
CACNB3-220ENST00000551716 PRDM16Q9HAZ2 1276 aa16.3■□□□□ 0.2
CACNB3-220ENST00000551716 TOR4AQ9NXH8 423 aa16.3■□□□□ 0.2
CACNB3-220ENST00000551716 SH3BP1Q9Y3L3 701 aa16.3■□□□□ 0.2
CACNB3-220ENST00000551716 RAI2Q9Y5P3 530 aa16.3■□□□□ 0.2
CACNB3-220ENST00000551716 BCAT2O15382 392 aaPredicted RBP16.29■□□□□ 0.2
CACNB3-220ENST00000551716 KALRNO60229 2985 aa16.29■□□□□ 0.2
CACNB3-220ENST00000551716 CILPO75339 1184 aa16.29■□□□□ 0.2
CACNB3-220ENST00000551716 TBCAO75347 108 aaKnown RBP16.29■□□□□ 0.2
CACNB3-220ENST00000551716 C1QL1O75973 258 aa16.29■□□□□ 0.2
CACNB3-220ENST00000551716 HLA-EP13747 358 aa16.29■□□□□ 0.2
CACNB3-220ENST00000551716 PLCG1P19174 1290 aa16.29■□□□□ 0.2
CACNB3-220ENST00000551716 MAOBP27338 520 aa16.29■□□□□ 0.2
CACNB3-220ENST00000551716 OXTRP30559 389 aa16.29■□□□□ 0.2
CACNB3-220ENST00000551716 WASP42768 502 aa16.29■□□□□ 0.2
CACNB3-220ENST00000551716 TAF10Q12962 218 aa16.29■□□□□ 0.2
CACNB3-220ENST00000551716 SMAD1Q15797 465 aaKnown RBP16.29■□□□□ 0.2
CACNB3-220ENST00000551716 SOWAHAQ2M3V2 549 aa16.29■□□□□ 0.2
CACNB3-220ENST00000551716 HLA-BQ31612 363 aa16.29■□□□□ 0.2
CACNB3-220ENST00000551716 ANO4Q32M45 955 aa16.29■□□□□ 0.2
CACNB3-220ENST00000551716 TMEM119Q4V9L6 283 aa16.29■□□□□ 0.2
CACNB3-220ENST00000551716 GRAMD4Q6IC98 578 aa16.29■□□□□ 0.2
CACNB3-220ENST00000551716 OSTM1Q86WC4 334 aa16.29■□□□□ 0.2
CACNB3-220ENST00000551716 C1orf127Q8N9H9 656 aa16.29■□□□□ 0.2
CACNB3-220ENST00000551716 FAM184AQ8NB25 1140 aa16.29■□□□□ 0.2
CACNB3-220ENST00000551716 PDZD8Q8NEN9 1154 aa16.29■□□□□ 0.2
CACNB3-220ENST00000551716 SCFD1Q8WVM8 642 aa16.29■□□□□ 0.2
CACNB3-220ENST00000551716 MYLPFQ96A32 169 aa16.29■□□□□ 0.2
CACNB3-220ENST00000551716 MRGPRX1Q96LB2 322 aa16.29■□□□□ 0.2
CACNB3-220ENST00000551716 DCBLD2Q96PD2 775 aa16.29■□□□□ 0.2
CACNB3-220ENST00000551716 SYT15Q9BQS2 421 aa16.29■□□□□ 0.2
CACNB3-220ENST00000551716 ZHX3Q9H4I2 956 aa16.29■□□□□ 0.2
CACNB3-220ENST00000551716 CD248Q9HCU0 757 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms