RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 PHACTR1Q9C0D0 580 aa13.6□□□□□ -0.23
CACNB3-219ENST00000551544 NUMBLQ9Y6R0 609 aa13.6□□□□□ -0.23
CACNB3-219ENST00000551544 C2CD2LO14523 706 aa13.6□□□□□ -0.23
CACNB3-219ENST00000551544 TM9SF1O15321 606 aa13.6□□□□□ -0.23
CACNB3-219ENST00000551544 INHBAP08476 426 aa13.6□□□□□ -0.23
CACNB3-219ENST00000551544 ZNF200P98182 395 aaPredicted RBP13.6□□□□□ -0.23
CACNB3-219ENST00000551544 SLC45A4Q5BKX6 768 aa13.6□□□□□ -0.23
CACNB3-219ENST00000551544 FAXCQ5TGI0 409 aa13.6□□□□□ -0.23
CACNB3-219ENST00000551544 PLPPR4Q7Z2D5 763 aa13.6□□□□□ -0.23
CACNB3-219ENST00000551544 ZNF276Q8N554 614 aa13.6□□□□□ -0.23
CACNB3-219ENST00000551544 FAM13CQ8NE31 585 aa13.6□□□□□ -0.23
CACNB3-219ENST00000551544 CPB2Q96IY4 423 aa13.6□□□□□ -0.23
CACNB3-219ENST00000551544 FAM111AQ96PZ2 611 aa13.6□□□□□ -0.23
CACNB3-219ENST00000551544 GPATCH2LQ9NWQ4 482 aa13.6□□□□□ -0.23
CACNB3-219ENST00000551544 NKX1-2Q9UD57 310 aaPredicted RBP13.6□□□□□ -0.23
CACNB3-219ENST00000551544 TNFSF13BQ9Y275 285 aa13.6□□□□□ -0.23
CACNB3-219ENST00000551544 PPME1Q9Y570 386 aa13.6□□□□□ -0.23
CACNB3-219ENST00000551544 IQANK1A0A1B0GTG1 560 aa13.59□□□□□ -0.23
CACNB3-219ENST00000551544 LGR5O75473 907 aa13.59□□□□□ -0.23
CACNB3-219ENST00000551544 SMNDC1O75940 238 aaKnown RBP eCLIP13.59□□□□□ -0.23
CACNB3-219ENST00000551544 GPD1P21695 349 aa13.59□□□□□ -0.23
CACNB3-219ENST00000551544 ZNF143P52747 638 aaPredicted RBP13.59□□□□□ -0.23
CACNB3-219ENST00000551544 KRT81Q14533 505 aa13.59□□□□□ -0.23
CACNB3-219ENST00000551544 MAP1SQ66K74 1059 aaPredicted RBP13.59□□□□□ -0.23
CACNB3-219ENST00000551544 TRNP1Q6NT89 227 aa13.59□□□□□ -0.23
CACNB3-219ENST00000551544 CTAGE3PQ8IX95 158 aa13.59□□□□□ -0.23
CACNB3-219ENST00000551544 EXOC8Q8IYI6 725 aa13.59□□□□□ -0.23
CACNB3-219ENST00000551544 INPP5DQ92835 1189 aa13.59□□□□□ -0.23
CACNB3-219ENST00000551544 ALKBH8Q96BT7 664 aaKnown RBP13.59□□□□□ -0.23
CACNB3-219ENST00000551544 RAB6BQ9NRW1 208 aa13.59□□□□□ -0.23
CACNB3-219ENST00000551544 HEY1Q9Y5J3 304 aa13.59□□□□□ -0.23
CACNB3-219ENST00000551544 E5RJQ4 531 aa13.59□□□□□ -0.23
CACNB3-219ENST00000551544 SOCS7O14512 581 aa13.59□□□□□ -0.23
CACNB3-219ENST00000551544 PRPSAP2O60256 369 aa13.59□□□□□ -0.23
CACNB3-219ENST00000551544 FAM155BO75949 473 aa13.59□□□□□ -0.23
CACNB3-219ENST00000551544 PYGBP11216 843 aa13.59□□□□□ -0.23
CACNB3-219ENST00000551544 STIP1P31948 543 aaKnown RBP13.59□□□□□ -0.23
CACNB3-219ENST00000551544 RGS7P49802 495 aa13.59□□□□□ -0.23
CACNB3-219ENST00000551544 RASSF2P50749 326 aa13.59□□□□□ -0.23
CACNB3-219ENST00000551544 NOMO1Q15155 1222 aa13.59□□□□□ -0.23
CACNB3-219ENST00000551544 CLNKQ7Z7G1 428 aa13.59□□□□□ -0.23
CACNB3-219ENST00000551544 HPDLQ96IR7 371 aa13.59□□□□□ -0.23
CACNB3-219ENST00000551544 TSSK1BQ9BXA7 367 aa13.59□□□□□ -0.23
CACNB3-219ENST00000551544 VPS11Q9H270 941 aa13.59□□□□□ -0.23
CACNB3-219ENST00000551544 KANSL3Q9P2N6 904 aa13.59□□□□□ -0.23
CACNB3-219ENST00000551544 CORO1CQ9ULV4 474 aaPredicted RBP13.59□□□□□ -0.23
CACNB3-219ENST00000551544 SMAPO00193 183 aa13.59□□□□□ -0.23
CACNB3-219ENST00000551544 KCNN4O15554 427 aa13.59□□□□□ -0.23
CACNB3-219ENST00000551544 GABRB2P47870 512 aa13.59□□□□□ -0.23
CACNB3-219ENST00000551544 NDST1P52848 882 aa13.59□□□□□ -0.23
CACNB3-219ENST00000551544 ZC3H12AQ5D1E8 599 aaKnown RBP13.59□□□□□ -0.23
CACNB3-219ENST00000551544 FAM183BPQ6ZVS7 135 aa13.59□□□□□ -0.23
CACNB3-219ENST00000551544 PRPF39Q86UA1 669 aaKnown RBP13.59□□□□□ -0.23
CACNB3-219ENST00000551544 ARMC2Q8NEN0 867 aa13.59□□□□□ -0.23
CACNB3-219ENST00000551544 SPDL1Q96EA4 605 aa13.59□□□□□ -0.23
CACNB3-219ENST00000551544 CNPY3Q9BT09 278 aa13.59□□□□□ -0.23
CACNB3-219ENST00000551544 TRIM55Q9BYV6 548 aa13.59□□□□□ -0.23
CACNB3-219ENST00000551544 RNPEPQ9H4A4 650 aa13.59□□□□□ -0.23
CACNB3-219ENST00000551544 SLC24A3Q9HC58 644 aa13.59□□□□□ -0.23
CACNB3-219ENST00000551544 CFAP69A5D8W1 941 aa13.58□□□□□ -0.24
CACNB3-219ENST00000551544 LUC7L3O95232 432 aaKnown RBP13.58□□□□□ -0.24
CACNB3-219ENST00000551544 VDRP11473 427 aa13.58□□□□□ -0.24
CACNB3-219ENST00000551544 CDC25CP30307 473 aa13.58□□□□□ -0.24
CACNB3-219ENST00000551544 PCK1P35558 622 aa13.58□□□□□ -0.24
CACNB3-219ENST00000551544 BAG6P46379 1132 aa13.58□□□□□ -0.24
CACNB3-219ENST00000551544 TFDP2Q14188 446 aa13.58□□□□□ -0.24
CACNB3-219ENST00000551544 KCNJ11Q14654 390 aa13.58□□□□□ -0.24
CACNB3-219ENST00000551544 ACAP1Q15027 740 aa13.58□□□□□ -0.24
CACNB3-219ENST00000551544 C11orf91Q3C1V1 193 aa13.58□□□□□ -0.24
CACNB3-219ENST00000551544 ANKRD20A2Q5SQ80 823 aa13.58□□□□□ -0.24
CACNB3-219ENST00000551544 ANKRD20A1Q5TYW2 823 aa13.58□□□□□ -0.24
CACNB3-219ENST00000551544 ANKRD20A3Q5VUR7 823 aa13.58□□□□□ -0.24
CACNB3-219ENST00000551544 CYP4V2Q6ZWL3 525 aaPredicted RBP13.58□□□□□ -0.24
CACNB3-219ENST00000551544 PPM1NQ8N819 430 aa13.58□□□□□ -0.24
CACNB3-219ENST00000551544 C12orf29Q8N999 325 aa13.58□□□□□ -0.24
CACNB3-219ENST00000551544 SLC44A1Q8WWI5 657 aa13.58□□□□□ -0.24
CACNB3-219ENST00000551544 NGRNQ9NPE2 291 aaKnown RBP13.58□□□□□ -0.24
CACNB3-219ENST00000551544 GPRC5DQ9NZD1 345 aa13.58□□□□□ -0.24
CACNB3-219ENST00000551544 HEY2Q9UBP5 337 aa13.58□□□□□ -0.24
CACNB3-219ENST00000551544 TEX264Q9Y6I9 313 aa13.58□□□□□ -0.24
CACNB3-219ENST00000551544 MGAMO43451 1857 aa13.58□□□□□ -0.24
CACNB3-219ENST00000551544 A0A087WZ62 844 aa13.58□□□□□ -0.24
CACNB3-219ENST00000551544 C2CD4BA6NLJ0 364 aa13.58□□□□□ -0.24
CACNB3-219ENST00000551544 H0Y3Z8 333 aa13.58□□□□□ -0.24
CACNB3-219ENST00000551544 HMGCRP04035 888 aa13.58□□□□□ -0.24
CACNB3-219ENST00000551544 TXNP10599 105 aaKnown RBP13.58□□□□□ -0.24
CACNB3-219ENST00000551544 GM2AP17900 193 aa13.58□□□□□ -0.24
CACNB3-219ENST00000551544 CYP3A5P20815 502 aa13.58□□□□□ -0.24
CACNB3-219ENST00000551544 BGNP21810 368 aa13.58□□□□□ -0.24
CACNB3-219ENST00000551544 CCNHP51946 323 aaPredicted RBP13.58□□□□□ -0.24
CACNB3-219ENST00000551544 NAIF1Q69YI7 327 aaPredicted RBP13.58□□□□□ -0.24
CACNB3-219ENST00000551544 FDXACB1Q9BRP7 624 aaPredicted RBP13.58□□□□□ -0.24
CACNB3-219ENST00000551544 SMARCAD1Q9H4L7 1026 aa13.58□□□□□ -0.24
CACNB3-219ENST00000551544 IFT122Q9HBG6 1241 aa13.58□□□□□ -0.24
CACNB3-219ENST00000551544 PDGFCQ9NRA1 345 aa13.58□□□□□ -0.24
CACNB3-219ENST00000551544 TSPAN16Q9UKR8 245 aa13.58□□□□□ -0.24
CACNB3-219ENST00000551544 CSADQ9Y600 493 aa13.58□□□□□ -0.24
CACNB3-219ENST00000551544 C2orf71A6NGG8 1288 aa13.57□□□□□ -0.24
CACNB3-219ENST00000551544 IRF6O14896 467 aa13.57□□□□□ -0.24
CACNB3-219ENST00000551544 HBP1O60381 514 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms