RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 PAQR9Q6ZVX9 377 aa23.04■■□□□ 1.28
SMARCC2-210ENST00000550519 C12orf40Q86WS4 652 aa23.04■■□□□ 1.28
SMARCC2-210ENST00000550519 IL17RCQ8NAC3 791 aa23.04■■□□□ 1.28
SMARCC2-210ENST00000550519 OLIG1Q8TAK6 271 aa23.04■■□□□ 1.28
SMARCC2-210ENST00000550519 FBXO32Q969P5 355 aa23.04■■□□□ 1.28
SMARCC2-210ENST00000550519 EDEM2Q9BV94 578 aa23.04■■□□□ 1.28
SMARCC2-210ENST00000550519 ANGPTL2Q9UKU9 493 aa23.04■■□□□ 1.28
SMARCC2-210ENST00000550519 PCDHA7Q9UN72 937 aa23.04■■□□□ 1.28
SMARCC2-210ENST00000550519 TNFRSF10BO14763 440 aa23.03■■□□□ 1.28
SMARCC2-210ENST00000550519 COCHO43405 550 aa23.03■■□□□ 1.28
SMARCC2-210ENST00000550519 KAT7O95251 611 aa23.03■■□□□ 1.28
SMARCC2-210ENST00000550519 KCNK5O95279 499 aa23.03■■□□□ 1.28
SMARCC2-210ENST00000550519 ADH1CP00326 375 aa23.03■■□□□ 1.28
SMARCC2-210ENST00000550519 BCKDHBP21953 392 aa23.03■■□□□ 1.28
SMARCC2-210ENST00000550519 AFMP43652 599 aa23.03■■□□□ 1.28
SMARCC2-210ENST00000550519 AP3M2P53677 418 aa23.03■■□□□ 1.28
SMARCC2-210ENST00000550519 SHC2P98077 582 aa23.03■■□□□ 1.28
SMARCC2-210ENST00000550519 ST3GAL2Q16842 350 aa23.03■■□□□ 1.28
SMARCC2-210ENST00000550519 HSF5Q4G112 596 aaPredicted RBP23.03■■□□□ 1.28
SMARCC2-210ENST00000550519 FOXD4L5Q5VV16 416 aaPredicted RBP23.03■■□□□ 1.28
SMARCC2-210ENST00000550519 RESP18Q5W5W9 173 aa23.03■■□□□ 1.28
SMARCC2-210ENST00000550519 FAM35AQ86V20 835 aa23.03■■□□□ 1.28
SMARCC2-210ENST00000550519 ALLCQ8N6M5 410 aa23.03■■□□□ 1.28
SMARCC2-210ENST00000550519 SCAMP5Q8TAC9 235 aa23.03■■□□□ 1.28
SMARCC2-210ENST00000550519 GOLGA5Q8TBA6 731 aa23.03■■□□□ 1.28
SMARCC2-210ENST00000550519 FOXD4L4Q8WXT5 416 aaPredicted RBP23.03■■□□□ 1.28
SMARCC2-210ENST00000550519 OTUB2Q96DC9 234 aa23.03■■□□□ 1.28
SMARCC2-210ENST00000550519 FAM13BQ9NYF5 915 aa23.03■■□□□ 1.28
SMARCC2-210ENST00000550519 CHORDC1Q9UHD1 332 aaPredicted RBP23.03■■□□□ 1.28
SMARCC2-210ENST00000550519 ABCA7Q8IZY2 2146 aa23.03■■□□□ 1.28
SMARCC2-210ENST00000550519 ATP8B3O60423 1300 aa23.03■■□□□ 1.28
SMARCC2-210ENST00000550519 FAM92AA1XBS5 289 aa23.02■■□□□ 1.28
SMARCC2-210ENST00000550519 LRRIQ3A6PVS8 624 aaPredicted RBP23.02■■□□□ 1.28
SMARCC2-210ENST00000550519 C4BPAP04003 597 aaKnown RBP23.02■■□□□ 1.28
SMARCC2-210ENST00000550519 APODP05090 189 aa23.02■■□□□ 1.28
SMARCC2-210ENST00000550519 ADH5P11766 374 aa23.02■■□□□ 1.28
SMARCC2-210ENST00000550519 GRIA2P42262 883 aa23.02■■□□□ 1.28
SMARCC2-210ENST00000550519 KIR2DL1P43626 348 aaPredicted RBP23.02■■□□□ 1.28
SMARCC2-210ENST00000550519 SLC5A3P53794 718 aa23.02■■□□□ 1.28
SMARCC2-210ENST00000550519 BIRC3Q13489 604 aa23.02■■□□□ 1.28
SMARCC2-210ENST00000550519 NCOA4Q13772 614 aa23.02■■□□□ 1.28
SMARCC2-210ENST00000550519 ZNF699Q32M78 642 aa23.02■■□□□ 1.28
SMARCC2-210ENST00000550519 ZNF667Q5HYK9 610 aa23.02■■□□□ 1.28
SMARCC2-210ENST00000550519 LY6G5CQ5SRR4 150 aa23.02■■□□□ 1.28
SMARCC2-210ENST00000550519 HECTD3Q5T447 861 aa23.02■■□□□ 1.28
SMARCC2-210ENST00000550519 PHTF2Q8N3S3 785 aa23.02■■□□□ 1.28
SMARCC2-210ENST00000550519 TXNDC5Q8NBS9 432 aaKnown RBP23.02■■□□□ 1.28
SMARCC2-210ENST00000550519 TMEM174Q8WUU8 243 aa23.02■■□□□ 1.28
SMARCC2-210ENST00000550519 TNIP3Q96KP6 325 aa23.02■■□□□ 1.28
SMARCC2-210ENST00000550519 DUSP9Q99956 384 aaKnown RBP23.02■■□□□ 1.28
SMARCC2-210ENST00000550519 SDCBP2Q9H190 292 aa23.02■■□□□ 1.28
SMARCC2-210ENST00000550519 DMAP1Q9NPF5 467 aaPredicted RBP23.02■■□□□ 1.28
SMARCC2-210ENST00000550519 ARHGEF4Q9NR80 690 aa23.02■■□□□ 1.28
SMARCC2-210ENST00000550519 DMAC2Q9NW81 257 aa23.02■■□□□ 1.28
SMARCC2-210ENST00000550519 USP24Q9UPU5 2620 aa23.02■■□□□ 1.28
SMARCC2-210ENST00000550519 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.01■■□□□ 1.27
SMARCC2-210ENST00000550519 LNP1A1A4G5 178 aa23.01■■□□□ 1.27
SMARCC2-210ENST00000550519 SGK1O00141 431 aa23.01■■□□□ 1.27
SMARCC2-210ENST00000550519 KLRC4O43908 158 aa23.01■■□□□ 1.27
SMARCC2-210ENST00000550519 ALDH1A2O94788 518 aa23.01■■□□□ 1.27
SMARCC2-210ENST00000550519 VNN1O95497 513 aa23.01■■□□□ 1.27
SMARCC2-210ENST00000550519 KLF8O95600 359 aaPredicted RBP23.01■■□□□ 1.27
SMARCC2-210ENST00000550519 ZDHHC11BP0C7U3 371 aa23.01■■□□□ 1.27
SMARCC2-210ENST00000550519 PDIA4P13667 645 aaKnown RBP23.01■■□□□ 1.27
SMARCC2-210ENST00000550519 TIE1P35590 1138 aa23.01■■□□□ 1.27
SMARCC2-210ENST00000550519 TNFRSF4P43489 277 aa23.01■■□□□ 1.27
SMARCC2-210ENST00000550519 TUBP50607 506 aa23.01■■□□□ 1.27
SMARCC2-210ENST00000550519 EMC10Q5UCC4 262 aa23.01■■□□□ 1.27
SMARCC2-210ENST00000550519 SLC9A9Q8IVB4 645 aa23.01■■□□□ 1.27
SMARCC2-210ENST00000550519 SNX21Q969T3 373 aa23.01■■□□□ 1.27
SMARCC2-210ENST00000550519 SMARCD1Q96GM5 515 aa23.01■■□□□ 1.27
SMARCC2-210ENST00000550519 CHAMP1Q96JM3 812 aa23.01■■□□□ 1.27
SMARCC2-210ENST00000550519 COMMD8Q9NX08 183 aa23.01■■□□□ 1.27
SMARCC2-210ENST00000550519 CEP295Q9C0D2 2601 aa23■■□□□ 1.27
SMARCC2-210ENST00000550519 C4orf47A7E2U8 309 aa23■■□□□ 1.27
SMARCC2-210ENST00000550519 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23■■□□□ 1.27
SMARCC2-210ENST00000550519 ZSCAN22P10073 491 aaPredicted RBP23■■□□□ 1.27
SMARCC2-210ENST00000550519 P2RY2P41231 377 aa23■■□□□ 1.27
SMARCC2-210ENST00000550519 ME1P48163 572 aa23■■□□□ 1.27
SMARCC2-210ENST00000550519 GAD2Q05329 585 aa23■■□□□ 1.27
SMARCC2-210ENST00000550519 STK4Q13043 487 aa23■■□□□ 1.27
SMARCC2-210ENST00000550519 FOXD4L6Q3SYB3 417 aaPredicted RBP23■■□□□ 1.27
SMARCC2-210ENST00000550519 FOXD4L3Q6VB84 417 aaPredicted RBP23■■□□□ 1.27
SMARCC2-210ENST00000550519 ETFBKMTQ8IXQ9 262 aa23■■□□□ 1.27
SMARCC2-210ENST00000550519 GRAMD1CQ8IYS0 662 aa23■■□□□ 1.27
SMARCC2-210ENST00000550519 FUKQ8N0W3 1084 aa23■■□□□ 1.27
SMARCC2-210ENST00000550519 ELMO3Q96BJ8 720 aa23■■□□□ 1.27
SMARCC2-210ENST00000550519 MED10Q9BTT4 135 aa23■■□□□ 1.27
SMARCC2-210ENST00000550519 CCSER2Q9H7U1 834 aa23■■□□□ 1.27
SMARCC2-210ENST00000550519 KHNYNO15037 678 aaKnown RBP22.99■■□□□ 1.27
SMARCC2-210ENST00000550519 F13A1P00488 732 aa22.99■■□□□ 1.27
SMARCC2-210ENST00000550519 EOGTQ5NDL2 527 aa22.99■■□□□ 1.27
SMARCC2-210ENST00000550519 ATL3Q6DD88 541 aa22.99■■□□□ 1.27
SMARCC2-210ENST00000550519 SCARA5Q6ZMJ2 495 aa22.99■■□□□ 1.27
SMARCC2-210ENST00000550519 CYP2U1Q7Z449 544 aa22.99■■□□□ 1.27
SMARCC2-210ENST00000550519 ACOT1Q86TX2 421 aa22.99■■□□□ 1.27
SMARCC2-210ENST00000550519 TTC30AQ86WT1 665 aa22.99■■□□□ 1.27
SMARCC2-210ENST00000550519 KIAA0895Q8NCT3 520 aa22.99■■□□□ 1.27
SMARCC2-210ENST00000550519 ZMIZ2Q8NF64 920 aa22.99■■□□□ 1.27
SMARCC2-210ENST00000550519 POLMQ9NP87 494 aaPredicted RBP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms