RNA–Protein interactions for RNA: ENST00000550144.1

CTDSP2-206, Transcript of CTD small phosphatase 2, humanhuman

TSL 4

Gene CTDSP2, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-206ENST00000550144 SEPT5Q99719 369 aaPredicted RBP12.11□□□□□ -0.47
CTDSP2-206ENST00000550144 ASNSD1Q9NWL6 643 aa12.11□□□□□ -0.47
CTDSP2-206ENST00000550144 FNIP2Q9P278 1114 aa12.11□□□□□ -0.47
CTDSP2-206ENST00000550144 AFF4Q9UHB7 1163 aaKnown RBP12.11□□□□□ -0.47
CTDSP2-206ENST00000550144 USTQ9Y2C2 406 aa12.11□□□□□ -0.47
CTDSP2-206ENST00000550144 SLC27A5Q9Y2P5 690 aa12.11□□□□□ -0.47
CTDSP2-206ENST00000550144 PCDHA11Q9Y5I1 949 aa12.11□□□□□ -0.47
CTDSP2-206ENST00000550144 PTPRDP23468 1912 aa12.11□□□□□ -0.47
CTDSP2-206ENST00000550144 MYH10P35580 1976 aa12.1□□□□□ -0.47
CTDSP2-206ENST00000550144 CCDC66A2RUB6 948 aa12.1□□□□□ -0.47
CTDSP2-206ENST00000550144 C2CD4BA6NLJ0 364 aa12.1□□□□□ -0.47
CTDSP2-206ENST00000550144 GRXCR1A8MXD5 290 aa12.1□□□□□ -0.47
CTDSP2-206ENST00000550144 DPYSL4O14531 572 aa12.1□□□□□ -0.47
CTDSP2-206ENST00000550144 ABLIM3O94929 683 aa12.1□□□□□ -0.47
CTDSP2-206ENST00000550144 VNN2O95498 520 aa12.1□□□□□ -0.47
CTDSP2-206ENST00000550144 RB1P06400 928 aa12.1□□□□□ -0.47
CTDSP2-206ENST00000550144 USP17L7P0C7H9 530 aa12.1□□□□□ -0.47
CTDSP2-206ENST00000550144 MYOGP15173 224 aa12.1□□□□□ -0.47
CTDSP2-206ENST00000550144 CTNNA2P26232 953 aa12.1□□□□□ -0.47
CTDSP2-206ENST00000550144 SDC4P31431 198 aa12.1□□□□□ -0.47
CTDSP2-206ENST00000550144 FLT3P36888 993 aa12.1□□□□□ -0.47
CTDSP2-206ENST00000550144 SSR1P43307 286 aaKnown RBP12.1□□□□□ -0.47
CTDSP2-206ENST00000550144 TUFMP49411 452 aaKnown RBP12.1□□□□□ -0.47
CTDSP2-206ENST00000550144 SLC5A3P53794 718 aa12.1□□□□□ -0.47
CTDSP2-206ENST00000550144 DAOAP59103 153 aa12.1□□□□□ -0.47
CTDSP2-206ENST00000550144 YWHAZP63104 245 aaKnown RBP12.1□□□□□ -0.47
CTDSP2-206ENST00000550144 UBE3AQ05086 875 aa12.1□□□□□ -0.47
CTDSP2-206ENST00000550144 ZNF252P-AS1Q0IIN9 211 aa12.1□□□□□ -0.47
CTDSP2-206ENST00000550144 DUSP4Q13115 394 aa12.1□□□□□ -0.47
CTDSP2-206ENST00000550144 RAB33AQ14088 237 aa12.1□□□□□ -0.47
CTDSP2-206ENST00000550144 ACAP1Q15027 740 aa12.1□□□□□ -0.47
CTDSP2-206ENST00000550144 DDR2Q16832 855 aa12.1□□□□□ -0.47
CTDSP2-206ENST00000550144 PM20D1Q6GTS8 502 aa12.1□□□□□ -0.47
CTDSP2-206ENST00000550144 FAM109BQ6ICB4 259 aaPredicted RBP12.1□□□□□ -0.47
CTDSP2-206ENST00000550144 TMC7Q7Z402 723 aa12.1□□□□□ -0.47
CTDSP2-206ENST00000550144 NUP93Q8N1F7 819 aa12.1□□□□□ -0.47
CTDSP2-206ENST00000550144 ZNF461Q8TAF7 563 aa12.1□□□□□ -0.47
CTDSP2-206ENST00000550144 GOLGA1Q92805 767 aa12.1□□□□□ -0.47
CTDSP2-206ENST00000550144 KHSRPQ92945 711 aaKnown RBP eCLIP12.1□□□□□ -0.47
CTDSP2-206ENST00000550144 FAM149B1Q96BN6 582 aa12.1□□□□□ -0.47
CTDSP2-206ENST00000550144 SAMD11Q96NU1 681 aa12.1□□□□□ -0.47
CTDSP2-206ENST00000550144 PSMB7Q99436 277 aa12.1□□□□□ -0.47
CTDSP2-206ENST00000550144 GDF15Q99988 308 aa12.1□□□□□ -0.47
CTDSP2-206ENST00000550144 C17orf80Q9BSJ5 609 aa12.1□□□□□ -0.47
CTDSP2-206ENST00000550144 CNPY3Q9BT09 278 aa12.1□□□□□ -0.47
CTDSP2-206ENST00000550144 C11orf84Q9BUA3 381 aaPredicted RBP12.1□□□□□ -0.47
CTDSP2-206ENST00000550144 TRIM62Q9BVG3 475 aa12.1□□□□□ -0.47
CTDSP2-206ENST00000550144 RXFP1Q9HBX9 757 aa12.1□□□□□ -0.47
CTDSP2-206ENST00000550144 HSFX1Q9UBD0 423 aa12.1□□□□□ -0.47
CTDSP2-206ENST00000550144 CDC23Q9UJX2 597 aa12.1□□□□□ -0.47
CTDSP2-206ENST00000550144 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.1□□□□□ -0.47
CTDSP2-206ENST00000550144 USP3Q9Y6I4 520 aa12.1□□□□□ -0.47
CTDSP2-206ENST00000550144 TRIOBPQ9H2D6 2365 aa12.1□□□□□ -0.47
CTDSP2-206ENST00000550144 COL6A3P12111 3177 aa12.09□□□□□ -0.47
CTDSP2-206ENST00000550144 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.09□□□□□ -0.47
CTDSP2-206ENST00000550144 C5orf67F2Z3F1 127 aa12.09□□□□□ -0.47
CTDSP2-206ENST00000550144 H0YGN5 161 aa12.09□□□□□ -0.47
CTDSP2-206ENST00000550144 KCNK3O14649 394 aa12.09□□□□□ -0.47
CTDSP2-206ENST00000550144 TNFRSF10BO14763 440 aa12.09□□□□□ -0.47
CTDSP2-206ENST00000550144 DDX3YO15523 660 aaKnown RBP12.09□□□□□ -0.47
CTDSP2-206ENST00000550144 LILRB3O75022 631 aa12.09□□□□□ -0.47
CTDSP2-206ENST00000550144 SRGAP2O75044 1071 aa12.09□□□□□ -0.47
CTDSP2-206ENST00000550144 DAB1O75553 588 aa12.09□□□□□ -0.47
CTDSP2-206ENST00000550144 RNF8O76064 485 aa12.09□□□□□ -0.47
CTDSP2-206ENST00000550144 CXCL14O95715 111 aa12.09□□□□□ -0.47
CTDSP2-206ENST00000550144 CA3P07451 260 aa12.09□□□□□ -0.47
CTDSP2-206ENST00000550144 CXCR5P32302 372 aa12.09□□□□□ -0.47
CTDSP2-206ENST00000550144 CTNNA1P35221 906 aaKnown RBP12.09□□□□□ -0.47
CTDSP2-206ENST00000550144 GPR15P49685 360 aa12.09□□□□□ -0.47
CTDSP2-206ENST00000550144 WHAMMP3Q1A5X7 153 aa12.09□□□□□ -0.47
CTDSP2-206ENST00000550144 CC2D1AQ6P1N0 951 aaPredicted RBP12.09□□□□□ -0.47
CTDSP2-206ENST00000550144 CPNE8Q86YQ8 564 aa12.09□□□□□ -0.47
CTDSP2-206ENST00000550144 RHOT1Q8IXI2 618 aa12.09□□□□□ -0.47
CTDSP2-206ENST00000550144 TTC9BQ8N6N2 239 aa12.09□□□□□ -0.47
CTDSP2-206ENST00000550144 SCAMP5Q8TAC9 235 aa12.09□□□□□ -0.47
CTDSP2-206ENST00000550144 NDRG1Q92597 394 aaKnown RBP12.09□□□□□ -0.47
CTDSP2-206ENST00000550144 CD101Q93033 1021 aa12.09□□□□□ -0.47
CTDSP2-206ENST00000550144 PBKQ96KB5 322 aa12.09□□□□□ -0.47
CTDSP2-206ENST00000550144 SPATA17Q96L03 361 aa12.09□□□□□ -0.47
CTDSP2-206ENST00000550144 CEP295NLQ96MC4 621 aa12.09□□□□□ -0.47
CTDSP2-206ENST00000550144 TGS1Q96RS0 853 aaKnown RBP12.09□□□□□ -0.47
CTDSP2-206ENST00000550144 NCAPGQ9BPX3 1015 aa12.09□□□□□ -0.47
CTDSP2-206ENST00000550144 TCF25Q9BQ70 676 aa12.09□□□□□ -0.47
CTDSP2-206ENST00000550144 EMILIN2Q9BXX0 1053 aa12.09□□□□□ -0.47
CTDSP2-206ENST00000550144 CRISPLD1Q9H336 500 aa12.09□□□□□ -0.47
CTDSP2-206ENST00000550144 FBXO44Q9H4M3 255 aa12.09□□□□□ -0.47
CTDSP2-206ENST00000550144 L2HGDHQ9H9P8 463 aa12.09□□□□□ -0.47
CTDSP2-206ENST00000550144 POPDC2Q9HBU9 364 aa12.09□□□□□ -0.47
CTDSP2-206ENST00000550144 ALG13Q9NP73 1137 aaKnown RBP12.09□□□□□ -0.47
CTDSP2-206ENST00000550144 ENTPD7Q9NQZ7 604 aa12.09□□□□□ -0.47
CTDSP2-206ENST00000550144 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.09□□□□□ -0.47
CTDSP2-206ENST00000550144 MTUS1Q9ULD2 1270 aa12.09□□□□□ -0.47
CTDSP2-206ENST00000550144 MAFFQ9ULX9 164 aa12.09□□□□□ -0.47
CTDSP2-206ENST00000550144 PCDHA3Q9Y5H8 950 aa12.09□□□□□ -0.47
CTDSP2-206ENST00000550144 MRFAP1Q9Y605 127 aa12.09□□□□□ -0.47
CTDSP2-206ENST00000550144 PATJQ8NI35 1801 aa12.09□□□□□ -0.47
CTDSP2-206ENST00000550144 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.08□□□□□ -0.48
CTDSP2-206ENST00000550144 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.08□□□□□ -0.48
CTDSP2-206ENST00000550144 YJEFN3A6XGL0 299 aa12.08□□□□□ -0.48
CTDSP2-206ENST00000550144 E7ENQ6 273 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms