RNA–Protein interactions for RNA: ENST00000549549.1

PRIM1-204, Transcript of DNA primase subunit 1, humanhuman

TSL 3

Gene PRIM1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-204ENST00000549549 COL15A1P39059 1388 aa10.15□□□□□ -0.78
PRIM1-204ENST00000549549 A0A1W2PPH5 198 aa10.15□□□□□ -0.78
PRIM1-204ENST00000549549 USO1O60763 962 aaKnown RBP10.15□□□□□ -0.78
PRIM1-204ENST00000549549 CBFA2T3O75081 653 aa10.15□□□□□ -0.78
PRIM1-204ENST00000549549 RPP40O75818 363 aaKnown RBP10.15□□□□□ -0.78
PRIM1-204ENST00000549549 CSF1RP07333 972 aa10.15□□□□□ -0.78
PRIM1-204ENST00000549549 HGFP14210 728 aa10.15□□□□□ -0.78
PRIM1-204ENST00000549549 SERPINA4P29622 427 aa10.15□□□□□ -0.78
PRIM1-204ENST00000549549 MAN2A2P49641 1150 aa10.15□□□□□ -0.78
PRIM1-204ENST00000549549 CCNIQ14094 377 aa10.15□□□□□ -0.78
PRIM1-204ENST00000549549 RPS6KA2Q15349 733 aa10.15□□□□□ -0.78
PRIM1-204ENST00000549549 GALNTL6Q49A17 601 aa10.15□□□□□ -0.78
PRIM1-204ENST00000549549 Q8NA96 180 aa10.15□□□□□ -0.78
PRIM1-204ENST00000549549 SUN3Q8TAQ9 357 aa10.15□□□□□ -0.78
PRIM1-204ENST00000549549 ADAMTS15Q8TE58 950 aa10.15□□□□□ -0.78
PRIM1-204ENST00000549549 RSRC1Q96IZ7 334 aaKnown RBP10.15□□□□□ -0.78
PRIM1-204ENST00000549549 HIST1H2AAQ96QV6 131 aa10.15□□□□□ -0.78
PRIM1-204ENST00000549549 ZFP64Q9NPA5 681 aa10.15□□□□□ -0.78
PRIM1-204ENST00000549549 TBX20Q9UMR3 447 aa10.15□□□□□ -0.78
PRIM1-204ENST00000549549 ARHGAP26Q9UNA1 814 aa10.15□□□□□ -0.78
PRIM1-204ENST00000549549 USP22Q9UPT9 525 aa10.15□□□□□ -0.78
PRIM1-204ENST00000549549 DNAJC16Q9Y2G8 782 aa10.15□□□□□ -0.78
PRIM1-204ENST00000549549 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.15□□□□□ -0.78
PRIM1-204ENST00000549549 TSPAN3O60637 253 aa10.14□□□□□ -0.79
PRIM1-204ENST00000549549 HNRNPA1P09651 372 aaKnown RBP eCLIP10.14□□□□□ -0.79
PRIM1-204ENST00000549549 KCNA2P16389 499 aa10.14□□□□□ -0.79
PRIM1-204ENST00000549549 ITGALP20701 1170 aa10.14□□□□□ -0.79
PRIM1-204ENST00000549549 UQCRC1P31930 480 aa10.14□□□□□ -0.79
PRIM1-204ENST00000549549 PGDP52209 483 aa10.14□□□□□ -0.79
PRIM1-204ENST00000549549 TIAL1Q01085 375 aaKnown RBP eCLIP10.14□□□□□ -0.79
PRIM1-204ENST00000549549 CSHL1Q14406 222 aa10.14□□□□□ -0.79
PRIM1-204ENST00000549549 ZNF385BQ569K4 471 aa10.14□□□□□ -0.79
PRIM1-204ENST00000549549 DCAF17Q5H9S7 520 aaPredicted RBP10.14□□□□□ -0.79
PRIM1-204ENST00000549549 CERCAMQ5T4B2 595 aa10.14□□□□□ -0.79
PRIM1-204ENST00000549549 TSHZ3Q63HK5 1081 aa10.14□□□□□ -0.79
PRIM1-204ENST00000549549 RASGRP2Q7LDG7 609 aa10.14□□□□□ -0.79
PRIM1-204ENST00000549549 TRABD2AQ86V40 505 aa10.14□□□□□ -0.79
PRIM1-204ENST00000549549 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.14□□□□□ -0.79
PRIM1-204ENST00000549549 TDRD7Q8NHU6 1098 aaKnown RBP10.14□□□□□ -0.79
PRIM1-204ENST00000549549 TMEM176AQ96HP8 235 aa10.14□□□□□ -0.79
PRIM1-204ENST00000549549 LMF1Q96S06 567 aa10.14□□□□□ -0.79
PRIM1-204ENST00000549549 PRDM13Q9H4Q3 707 aa10.14□□□□□ -0.79
PRIM1-204ENST00000549549 UNKLQ9H9P5 680 aaKnown RBP10.14□□□□□ -0.79
PRIM1-204ENST00000549549 PLA2G3Q9NZ20 509 aa10.14□□□□□ -0.79
PRIM1-204ENST00000549549 KCND3Q9UK17 655 aa10.14□□□□□ -0.79
PRIM1-204ENST00000549549 SH3BP1Q9Y3L3 701 aa10.14□□□□□ -0.79
PRIM1-204ENST00000549549 CYP46A1Q9Y6A2 500 aa10.14□□□□□ -0.79
PRIM1-204ENST00000549549 CCDC78A2IDD5 438 aa10.13□□□□□ -0.79
PRIM1-204ENST00000549549 PGPEP1LA6NFU8 196 aa10.13□□□□□ -0.79
PRIM1-204ENST00000549549 AGPSO00116 658 aa10.13□□□□□ -0.79
PRIM1-204ENST00000549549 RFXAPO00287 272 aa10.13□□□□□ -0.79
PRIM1-204ENST00000549549 LARGE1O95461 756 aa10.13□□□□□ -0.79
PRIM1-204ENST00000549549 KRT1P04264 644 aa10.13□□□□□ -0.79
PRIM1-204ENST00000549549 RPS6KB1P23443 525 aa10.13□□□□□ -0.79
PRIM1-204ENST00000549549 GATMP50440 423 aa10.13□□□□□ -0.79
PRIM1-204ENST00000549549 ANXA11P50995 505 aaKnown RBP10.13□□□□□ -0.79
PRIM1-204ENST00000549549 CLNS1AP54105 237 aaKnown RBP10.13□□□□□ -0.79
PRIM1-204ENST00000549549 PPP2CBP62714 309 aa10.13□□□□□ -0.79
PRIM1-204ENST00000549549 PPP2CAP67775 309 aa10.13□□□□□ -0.79
PRIM1-204ENST00000549549 MESP2Q0VG99 397 aa10.13□□□□□ -0.79
PRIM1-204ENST00000549549 E2F2Q14209 437 aa10.13□□□□□ -0.79
PRIM1-204ENST00000549549 ELAVL1Q15717 326 aaKnown RBP10.13□□□□□ -0.79
PRIM1-204ENST00000549549 BAK1Q16611 211 aa10.13□□□□□ -0.79
PRIM1-204ENST00000549549 CTXN3Q4LDR2 81 aa10.13□□□□□ -0.79
PRIM1-204ENST00000549549 SFRP4Q6FHJ7 346 aaPredicted RBP10.13□□□□□ -0.79
PRIM1-204ENST00000549549 SYT13Q7L8C5 426 aa10.13□□□□□ -0.79
PRIM1-204ENST00000549549 ANKRD52Q8NB46 1076 aa10.13□□□□□ -0.79
PRIM1-204ENST00000549549 ZMIZ2Q8NF64 920 aa10.13□□□□□ -0.79
PRIM1-204ENST00000549549 PAAF1Q9BRP4 392 aa10.13□□□□□ -0.79
PRIM1-204ENST00000549549 SCO2A0A1W2PP80 73 aa10.12□□□□□ -0.79
PRIM1-204ENST00000549549 TCERG1O14776 1098 aaKnown RBP10.12□□□□□ -0.79
PRIM1-204ENST00000549549 RTN3O95197 1032 aaPredicted RBP10.12□□□□□ -0.79
PRIM1-204ENST00000549549 CER1O95813 267 aa10.12□□□□□ -0.79
PRIM1-204ENST00000549549 NTSR1P30989 418 aa10.12□□□□□ -0.79
PRIM1-204ENST00000549549 PRKAR1BP31321 381 aa10.12□□□□□ -0.79
PRIM1-204ENST00000549549 HTR7P34969 479 aa10.12□□□□□ -0.79
PRIM1-204ENST00000549549 NAP1L1P55209 391 aaKnown RBP10.12□□□□□ -0.79
PRIM1-204ENST00000549549 NUCB1Q02818 461 aa10.12□□□□□ -0.79
PRIM1-204ENST00000549549 DGAT2L7PQ6IED9 249 aa10.12□□□□□ -0.79
PRIM1-204ENST00000549549 SLC15A3Q8IY34 581 aa10.12□□□□□ -0.79
PRIM1-204ENST00000549549 SMG5Q9UPR3 1016 aaKnown RBP10.12□□□□□ -0.79
PRIM1-204ENST00000549549 SSX2IPQ9Y2D8 614 aa10.12□□□□□ -0.79
PRIM1-204ENST00000549549 VWA3AA6NCI4 1184 aa10.11□□□□□ -0.79
PRIM1-204ENST00000549549 NOBOXO60393 691 aa10.11□□□□□ -0.79
PRIM1-204ENST00000549549 ZBED4O75132 1171 aa10.11□□□□□ -0.79
PRIM1-204ENST00000549549 HLA-DOAP06340 250 aa10.11□□□□□ -0.79
PRIM1-204ENST00000549549 CYP21A2P08686 494 aa10.11□□□□□ -0.79
PRIM1-204ENST00000549549 RBL1P28749 1068 aa10.11□□□□□ -0.79
PRIM1-204ENST00000549549 MAGEA10P43363 369 aaPredicted RBP10.11□□□□□ -0.79
PRIM1-204ENST00000549549 AFF3P51826 1226 aaKnown RBP10.11□□□□□ -0.79
PRIM1-204ENST00000549549 RBM5P52756 815 aaKnown RBP eCLIP10.11□□□□□ -0.79
PRIM1-204ENST00000549549 ATXN1P54253 815 aaKnown RBP10.11□□□□□ -0.79
PRIM1-204ENST00000549549 EPHB4P54760 987 aa10.11□□□□□ -0.79
PRIM1-204ENST00000549549 MC2RQ01718 297 aa10.11□□□□□ -0.79
PRIM1-204ENST00000549549 NFIXQ14938 502 aa10.11□□□□□ -0.79
PRIM1-204ENST00000549549 WDR45BQ5MNZ6 344 aa10.11□□□□□ -0.79
PRIM1-204ENST00000549549 ARHGAP40Q5TG30 622 aa10.11□□□□□ -0.79
PRIM1-204ENST00000549549 NAIF1Q69YI7 327 aaPredicted RBP10.11□□□□□ -0.79
PRIM1-204ENST00000549549 MSANTD2Q6P1R3 559 aa10.11□□□□□ -0.79
PRIM1-204ENST00000549549 ATG14Q6ZNE5 492 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms