RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 SP4Q02446 784 aa14.3□□□□□ -0.12
HDAC7-228ENST00000548938 MAP3K10Q02779 954 aa14.3□□□□□ -0.12
HDAC7-228ENST00000548938 C6orf163Q5TEZ5 329 aa14.3□□□□□ -0.12
HDAC7-228ENST00000548938 POLNQ7Z5Q5 900 aa14.3□□□□□ -0.12
HDAC7-228ENST00000548938 CTAGE3PQ8IX95 158 aa14.3□□□□□ -0.12
HDAC7-228ENST00000548938 WDTC1Q8N5D0 677 aa14.3□□□□□ -0.12
HDAC7-228ENST00000548938 NIPA2Q8N8Q9 360 aa14.3□□□□□ -0.12
HDAC7-228ENST00000548938 MTBPQ96DY7 904 aa14.3□□□□□ -0.12
HDAC7-228ENST00000548938 CFAP36Q96G28 342 aa14.3□□□□□ -0.12
HDAC7-228ENST00000548938 TJP2Q9UDY2 1190 aa14.3□□□□□ -0.12
HDAC7-228ENST00000548938 PCDHA10Q9Y5I2 948 aa14.3□□□□□ -0.12
HDAC7-228ENST00000548938 ITGBL1O95965 494 aaPredicted RBP14.3□□□□□ -0.12
HDAC7-228ENST00000548938 TSHRP16473 764 aa14.3□□□□□ -0.12
HDAC7-228ENST00000548938 RPS12P25398 132 aaKnown RBP14.3□□□□□ -0.12
HDAC7-228ENST00000548938 CRABP2P29373 138 aa14.3□□□□□ -0.12
HDAC7-228ENST00000548938 AQP5P55064 265 aa14.3□□□□□ -0.12
HDAC7-228ENST00000548938 EIF3EP60228 445 aaKnown RBP14.3□□□□□ -0.12
HDAC7-228ENST00000548938 SAMD7Q7Z3H4 446 aa14.3□□□□□ -0.12
HDAC7-228ENST00000548938 MCF2L2Q86YR7 1114 aa14.3□□□□□ -0.12
HDAC7-228ENST00000548938 MICALL2Q8IY33 904 aa14.3□□□□□ -0.12
HDAC7-228ENST00000548938 PPM1NQ8N819 430 aa14.3□□□□□ -0.12
HDAC7-228ENST00000548938 TMEM35BQ8NCS4 154 aa14.3□□□□□ -0.12
HDAC7-228ENST00000548938 JOSD2Q8TAC2 188 aa14.3□□□□□ -0.12
HDAC7-228ENST00000548938 C7orf26Q96N11 449 aa14.3□□□□□ -0.12
HDAC7-228ENST00000548938 PDCD2LQ9BRP1 358 aa14.3□□□□□ -0.12
HDAC7-228ENST00000548938 SPATA16Q9BXB7 569 aa14.3□□□□□ -0.12
HDAC7-228ENST00000548938 WWP1Q9H0M0 922 aa14.3□□□□□ -0.12
HDAC7-228ENST00000548938 EBF3Q9H4W6 596 aa14.3□□□□□ -0.12
HDAC7-228ENST00000548938 SLC9A2Q9UBY0 812 aa14.3□□□□□ -0.12
HDAC7-228ENST00000548938 TEX264Q9Y6I9 313 aa14.3□□□□□ -0.12
HDAC7-228ENST00000548938 PRR5-ARHGAP8B1AHC4 643 aa14.29□□□□□ -0.12
HDAC7-228ENST00000548938 FZD9O00144 591 aa14.29□□□□□ -0.12
HDAC7-228ENST00000548938 WEE2P0C1S8 567 aa14.29□□□□□ -0.12
HDAC7-228ENST00000548938 HARSP12081 509 aaKnown RBP14.29□□□□□ -0.12
HDAC7-228ENST00000548938 MRPS5P82675 430 aaKnown RBP14.29□□□□□ -0.12
HDAC7-228ENST00000548938 ARHGAP8P85298 464 aa14.29□□□□□ -0.12
HDAC7-228ENST00000548938 UBAP2LQ14157 1087 aaKnown RBP14.29□□□□□ -0.12
HDAC7-228ENST00000548938 DPYSL3Q14195 570 aa14.29□□□□□ -0.12
HDAC7-228ENST00000548938 CHI3L2Q15782 390 aa14.29□□□□□ -0.12
HDAC7-228ENST00000548938 SESTD1Q86VW0 696 aa14.29□□□□□ -0.12
HDAC7-228ENST00000548938 RFX6Q8HWS3 928 aa14.29□□□□□ -0.12
HDAC7-228ENST00000548938 KIAA0319LQ8IZA0 1049 aa14.29□□□□□ -0.12
HDAC7-228ENST00000548938 UBR7Q8N806 425 aa14.29□□□□□ -0.12
HDAC7-228ENST00000548938 TTC13Q8NBP0 860 aa14.29□□□□□ -0.12
HDAC7-228ENST00000548938 MCPH1Q8NEM0 835 aa14.29□□□□□ -0.12
HDAC7-228ENST00000548938 TEPSINQ96N21 525 aa14.29□□□□□ -0.12
HDAC7-228ENST00000548938 RMDN3Q96TC7 470 aa14.29□□□□□ -0.12
HDAC7-228ENST00000548938 CGRRF1Q99675 332 aa14.29□□□□□ -0.12
HDAC7-228ENST00000548938 DMAP1Q9NPF5 467 aaPredicted RBP14.29□□□□□ -0.12
HDAC7-228ENST00000548938 PDLIM7Q9NR12 457 aa14.29□□□□□ -0.12
HDAC7-228ENST00000548938 PPME1Q9Y570 386 aa14.29□□□□□ -0.12
HDAC7-228ENST00000548938 GJA3Q9Y6H8 435 aa14.29□□□□□ -0.12
HDAC7-228ENST00000548938 CXorf49A8MYA2 514 aaPredicted RBP14.29□□□□□ -0.12
HDAC7-228ENST00000548938 BUD23O43709 281 aaKnown RBP14.29□□□□□ -0.12
HDAC7-228ENST00000548938 STAM2O75886 525 aa14.29□□□□□ -0.12
HDAC7-228ENST00000548938 DGAT1O75907 488 aa14.29□□□□□ -0.12
HDAC7-228ENST00000548938 LSM8O95777 96 aaKnown RBP14.29□□□□□ -0.12
HDAC7-228ENST00000548938 RBP3P10745 1247 aa14.29□□□□□ -0.12
HDAC7-228ENST00000548938 KDELR1P24390 212 aa14.29□□□□□ -0.12
HDAC7-228ENST00000548938 STIP1P31948 543 aaKnown RBP14.29□□□□□ -0.12
HDAC7-228ENST00000548938 CDK7P50613 346 aa14.29□□□□□ -0.12
HDAC7-228ENST00000548938 DYNC1I2Q13409 638 aaKnown RBP14.29□□□□□ -0.12
HDAC7-228ENST00000548938 BMPR2Q13873 1038 aa14.29□□□□□ -0.12
HDAC7-228ENST00000548938 TAF5Q15542 800 aa14.29□□□□□ -0.12
HDAC7-228ENST00000548938 DNAL1Q4LDG9 190 aa14.29□□□□□ -0.12
HDAC7-228ENST00000548938 LIN52Q52LA3 116 aa14.29□□□□□ -0.12
HDAC7-228ENST00000548938 TEX44Q53QW1 395 aa14.29□□□□□ -0.12
HDAC7-228ENST00000548938 GSTCDQ8NEC7 633 aa14.29□□□□□ -0.12
HDAC7-228ENST00000548938 E2F7Q96AV8 911 aa14.29□□□□□ -0.12
HDAC7-228ENST00000548938 CCDC106Q9BWC9 280 aa14.29□□□□□ -0.12
HDAC7-228ENST00000548938 SLC13A1Q9BZW2 595 aa14.29□□□□□ -0.12
HDAC7-228ENST00000548938 C20orf27Q9GZN8 174 aa14.29□□□□□ -0.12
HDAC7-228ENST00000548938 PLLPQ9Y342 182 aa14.29□□□□□ -0.12
HDAC7-228ENST00000548938 KAT6AQ92794 2004 aa14.29□□□□□ -0.12
HDAC7-228ENST00000548938 C1QAP02745 245 aa14.28□□□□□ -0.12
HDAC7-228ENST00000548938 ETS2P15036 469 aa14.28□□□□□ -0.12
HDAC7-228ENST00000548938 DGKZQ13574 1117 aa14.28□□□□□ -0.12
HDAC7-228ENST00000548938 TTC39BQ5VTQ0 682 aaPredicted RBP14.28□□□□□ -0.12
HDAC7-228ENST00000548938 SWSAP1Q6NVH7 229 aa14.28□□□□□ -0.12
HDAC7-228ENST00000548938 ARHGAP22Q7Z5H3 698 aa14.28□□□□□ -0.12
HDAC7-228ENST00000548938 SLC26A11Q86WA9 606 aa14.28□□□□□ -0.12
HDAC7-228ENST00000548938 B4GALNT2Q8NHY0 566 aa14.28□□□□□ -0.12
HDAC7-228ENST00000548938 TFAP2BQ92481 460 aa14.28□□□□□ -0.12
HDAC7-228ENST00000548938 EZH1Q92800 747 aaPredicted RBP14.28□□□□□ -0.12
HDAC7-228ENST00000548938 EBF4Q9BQW3 602 aa14.28□□□□□ -0.12
HDAC7-228ENST00000548938 MSTO1Q9BUK6 570 aa14.28□□□□□ -0.12
HDAC7-228ENST00000548938 PCSK1NQ9UHG2 260 aa14.28□□□□□ -0.12
HDAC7-228ENST00000548938 EFR3BQ9Y2G0 817 aa14.28□□□□□ -0.12
HDAC7-228ENST00000548938 TTLL3Q9Y4R7 772 aa14.28□□□□□ -0.12
HDAC7-228ENST00000548938 ARID2Q68CP9 1835 aa14.28□□□□□ -0.12
HDAC7-228ENST00000548938 CNTNAP2Q9UHC6 1331 aa14.28□□□□□ -0.12
HDAC7-228ENST00000548938 CST3P01034 146 aaPredicted RBP14.28□□□□□ -0.12
HDAC7-228ENST00000548938 EDN1P05305 212 aa14.28□□□□□ -0.12
HDAC7-228ENST00000548938 PRKCEQ02156 737 aa14.28□□□□□ -0.12
HDAC7-228ENST00000548938 TAP1Q03518 808 aa14.28□□□□□ -0.12
HDAC7-228ENST00000548938 MTMR2Q13614 643 aa14.28□□□□□ -0.12
HDAC7-228ENST00000548938 LRRC36Q1X8D7 754 aa14.28□□□□□ -0.12
HDAC7-228ENST00000548938 CFAP157Q5JU67 520 aa14.28□□□□□ -0.12
HDAC7-228ENST00000548938 NPNTQ6UXI9 565 aa14.28□□□□□ -0.12
HDAC7-228ENST00000548938 EMC1Q8N766 993 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms