RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 IMPG2Q9BZV3 1241 aa24.07■■□□□ 1.44
NPAS3-206ENST00000548645 MARCOQ9UEW3 520 aaPredicted RBP24.07■■□□□ 1.44
NPAS3-206ENST00000548645 ZNF180Q9UJW8 692 aa24.07■■□□□ 1.44
NPAS3-206ENST00000548645 PCDHA10Q9Y5I2 948 aa24.07■■□□□ 1.44
NPAS3-206ENST00000548645 PTGER2P43116 358 aa24.06■■□□□ 1.44
NPAS3-206ENST00000548645 TEX44Q53QW1 395 aa24.06■■□□□ 1.44
NPAS3-206ENST00000548645 KCNT1Q5JUK3 1230 aa24.06■■□□□ 1.44
NPAS3-206ENST00000548645 MASTLQ96GX5 879 aa24.06■■□□□ 1.44
NPAS3-206ENST00000548645 ATXN10Q9UBB4 475 aa24.06■■□□□ 1.44
NPAS3-206ENST00000548645 STYXL1Q9Y6J8 313 aa24.06■■□□□ 1.44
NPAS3-206ENST00000548645 ZNF541Q9H0D2 1346 aa24.06■■□□□ 1.44
NPAS3-206ENST00000548645 A0A088AWK7 358 aa24.06■■□□□ 1.44
NPAS3-206ENST00000548645 APOC4-APOC2K7ER74 178 aa24.06■■□□□ 1.44
NPAS3-206ENST00000548645 APOC2P02655 101 aa24.06■■□□□ 1.44
NPAS3-206ENST00000548645 PIM1P11309 404 aaPredicted RBP24.06■■□□□ 1.44
NPAS3-206ENST00000548645 XIAPP98170 497 aa24.06■■□□□ 1.44
NPAS3-206ENST00000548645 GSTCDQ8NEC7 633 aa24.06■■□□□ 1.44
NPAS3-206ENST00000548645 CGRRF1Q99675 332 aa24.06■■□□□ 1.44
NPAS3-206ENST00000548645 HBS1LQ9Y450 684 aaKnown RBP24.06■■□□□ 1.44
NPAS3-206ENST00000548645 CCDC195A0A1B0GUA6 201 aa24.05■■□□□ 1.44
NPAS3-206ENST00000548645 ARHGAP42A6NI28 874 aa24.05■■□□□ 1.44
NPAS3-206ENST00000548645 RBP3P10745 1247 aa24.05■■□□□ 1.44
NPAS3-206ENST00000548645 RANBP1P43487 201 aa24.05■■□□□ 1.44
NPAS3-206ENST00000548645 GHRHRQ02643 423 aa24.05■■□□□ 1.44
NPAS3-206ENST00000548645 WASHC5Q12768 1159 aa24.05■■□□□ 1.44
NPAS3-206ENST00000548645 NCOA4Q13772 614 aa24.05■■□□□ 1.44
NPAS3-206ENST00000548645 RFX6Q8HWS3 928 aa24.05■■□□□ 1.44
NPAS3-206ENST00000548645 FAM210AQ96ND0 272 aa24.05■■□□□ 1.44
NPAS3-206ENST00000548645 UQCRBP14927 111 aa24.05■■□□□ 1.44
NPAS3-206ENST00000548645 AOC1P19801 751 aa24.05■■□□□ 1.44
NPAS3-206ENST00000548645 PGM5Q15124 567 aa24.05■■□□□ 1.44
NPAS3-206ENST00000548645 CYP4A22Q5TCH4 519 aa24.05■■□□□ 1.44
NPAS3-206ENST00000548645 NAT14Q8WUY8 206 aa24.05■■□□□ 1.44
NPAS3-206ENST00000548645 CFAP36Q96G28 342 aa24.05■■□□□ 1.44
NPAS3-206ENST00000548645 TAAR1Q96RJ0 339 aa24.05■■□□□ 1.44
NPAS3-206ENST00000548645 MKS1Q9NXB0 559 aa24.05■■□□□ 1.44
NPAS3-206ENST00000548645 GABBR1Q9UBS5 961 aa24.05■■□□□ 1.44
NPAS3-206ENST00000548645 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP24.04■■□□□ 1.44
NPAS3-206ENST00000548645 LRCH4O75427 683 aa24.04■■□□□ 1.44
NPAS3-206ENST00000548645 IL1R2P27930 398 aa24.04■■□□□ 1.44
NPAS3-206ENST00000548645 CPOXP36551 454 aa24.04■■□□□ 1.44
NPAS3-206ENST00000548645 CAP2P40123 477 aa24.04■■□□□ 1.44
NPAS3-206ENST00000548645 MRPS5P82675 430 aaKnown RBP24.04■■□□□ 1.44
NPAS3-206ENST00000548645 GPAT2Q6NUI2 795 aa24.04■■□□□ 1.44
NPAS3-206ENST00000548645 UBR7Q8N806 425 aa24.04■■□□□ 1.44
NPAS3-206ENST00000548645 ITFG2Q969R8 447 aa24.04■■□□□ 1.44
NPAS3-206ENST00000548645 PRMT6Q96LA8 375 aaPredicted RBP24.04■■□□□ 1.44
NPAS3-206ENST00000548645 SLC13A1Q9BZW2 595 aa24.04■■□□□ 1.44
NPAS3-206ENST00000548645 KLHL4Q9C0H6 718 aa24.04■■□□□ 1.44
NPAS3-206ENST00000548645 ZNF395Q9H8N7 513 aaPredicted RBP24.04■■□□□ 1.44
NPAS3-206ENST00000548645 XPNPEP1Q9NQW7 623 aa24.04■■□□□ 1.44
NPAS3-206ENST00000548645 SPDYE2BA6NHP3 402 aa24.04■■□□□ 1.44
NPAS3-206ENST00000548645 DKC1O60832 514 aaKnown RBP eCLIP24.04■■□□□ 1.44
NPAS3-206ENST00000548645 SPDYE6P0CI01 402 aa24.04■■□□□ 1.44
NPAS3-206ENST00000548645 RFC1P35251 1148 aaPredicted RBP24.04■■□□□ 1.44
NPAS3-206ENST00000548645 CCNFP41002 786 aa24.04■■□□□ 1.44
NPAS3-206ENST00000548645 SPDYE2Q495Y8 402 aa24.04■■□□□ 1.44
NPAS3-206ENST00000548645 ATP6V0A1Q93050 837 aa24.04■■□□□ 1.44
NPAS3-206ENST00000548645 POLR3FQ9H1D9 316 aaPredicted RBP24.04■■□□□ 1.44
NPAS3-206ENST00000548645 PDLIM7Q9NR12 457 aa24.04■■□□□ 1.44
NPAS3-206ENST00000548645 SNNO75324 88 aaPredicted RBP24.04■■□□□ 1.44
NPAS3-206ENST00000548645 LDHAP00338 332 aaKnown RBP24.04■■□□□ 1.44
NPAS3-206ENST00000548645 HARSP12081 509 aaKnown RBP24.04■■□□□ 1.44
NPAS3-206ENST00000548645 EIF4BP23588 611 aaKnown RBP24.04■■□□□ 1.44
NPAS3-206ENST00000548645 UBAP2LQ14157 1087 aaKnown RBP24.04■■□□□ 1.44
NPAS3-206ENST00000548645 KCNJ11Q14654 390 aa24.04■■□□□ 1.44
NPAS3-206ENST00000548645 SMIM31A0A1B0GVY4 71 aa24.03■■□□□ 1.44
NPAS3-206ENST00000548645 ZNF862O60290 1169 aa24.03■■□□□ 1.44
NPAS3-206ENST00000548645 ONECUT3O60422 494 aaPredicted RBP24.03■■□□□ 1.44
NPAS3-206ENST00000548645 MAP7Q14244 749 aa24.03■■□□□ 1.44
NPAS3-206ENST00000548645 GRM2Q14416 872 aa24.03■■□□□ 1.44
NPAS3-206ENST00000548645 CES4AQ5XG92 561 aa24.03■■□□□ 1.44
NPAS3-206ENST00000548645 SLFN12LQ6IEE8 588 aa24.03■■□□□ 1.44
NPAS3-206ENST00000548645 KCTD6Q8NC69 237 aa24.03■■□□□ 1.44
NPAS3-206ENST00000548645 OR5B17Q8NGF7 314 aa24.03■■□□□ 1.44
NPAS3-206ENST00000548645 PIP4K2CQ8TBX8 421 aa24.03■■□□□ 1.44
NPAS3-206ENST00000548645 PYDC1Q8WXC3 89 aa24.03■■□□□ 1.44
NPAS3-206ENST00000548645 NDUFA13Q9P0J0 144 aa24.03■■□□□ 1.44
NPAS3-206ENST00000548645 TTLL3Q9Y4R7 772 aa24.03■■□□□ 1.44
NPAS3-206ENST00000548645 SDR42E2A6NKP2 422 aa24.03■■□□□ 1.44
NPAS3-206ENST00000548645 PENKP01210 267 aaPredicted RBP24.03■■□□□ 1.44
NPAS3-206ENST00000548645 ETS2P15036 469 aa24.03■■□□□ 1.44
NPAS3-206ENST00000548645 PDE1BQ01064 536 aa24.03■■□□□ 1.44
NPAS3-206ENST00000548645 MAP3K21Q5TCX8 1036 aa24.03■■□□□ 1.44
NPAS3-206ENST00000548645 SPATA18Q8TC71 538 aa24.03■■□□□ 1.44
NPAS3-206ENST00000548645 SIKE1Q9BRV8 207 aa24.03■■□□□ 1.44
NPAS3-206ENST00000548645 TESPA1A2RU30 521 aaPredicted RBP24.02■■□□□ 1.44
NPAS3-206ENST00000548645 MEI4A8MW99 385 aa24.02■■□□□ 1.44
NPAS3-206ENST00000548645 CHADO15335 359 aa24.02■■□□□ 1.44
NPAS3-206ENST00000548645 BIRC5O15392 142 aa24.02■■□□□ 1.44
NPAS3-206ENST00000548645 RFPL1O75677 317 aa24.02■■□□□ 1.44
NPAS3-206ENST00000548645 PYGLP06737 847 aa24.02■■□□□ 1.44
NPAS3-206ENST00000548645 C6orf222P0C671 652 aaPredicted RBP24.02■■□□□ 1.44
NPAS3-206ENST00000548645 KRT3P12035 628 aa24.02■■□□□ 1.44
NPAS3-206ENST00000548645 ROR1Q01973 937 aa24.02■■□□□ 1.44
NPAS3-206ENST00000548645 STX3Q13277 289 aa24.02■■□□□ 1.44
NPAS3-206ENST00000548645 LRRC36Q1X8D7 754 aa24.02■■□□□ 1.44
NPAS3-206ENST00000548645 PABPC1LQ4VXU2 614 aaKnown RBP24.02■■□□□ 1.44
NPAS3-206ENST00000548645 SFT2D3Q587I9 215 aa24.02■■□□□ 1.44
NPAS3-206ENST00000548645 WDTC1Q8N5D0 677 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms