RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 HMGB4Q8WW32 186 aa21.32■■□□□ 1
GATC-202ENST00000548171 OVCA2Q8WZ82 227 aa21.32■■□□□ 1
GATC-202ENST00000548171 TMEM74BQ9NUR3 256 aa21.32■■□□□ 1
GATC-202ENST00000548171 HSPBP1Q9NZL4 362 aa21.32■■□□□ 1
GATC-202ENST00000548171 MBD1Q9UIS9 605 aaPredicted RBP21.32■■□□□ 1
GATC-202ENST00000548171 PILRBQ9UKJ0 227 aa21.32■■□□□ 1
GATC-202ENST00000548171 MORC2Q9Y6X9 1032 aaPredicted RBP21.32■■□□□ 1
GATC-202ENST00000548171 ZFYVE26Q68DK2 2539 aa21.32■■□□□ 1
GATC-202ENST00000548171 PKD1L2Q7Z442 2459 aa21.32■■□□□ 1
GATC-202ENST00000548171 MYH10P35580 1976 aa21.31■■□□□ 1
GATC-202ENST00000548171 ADAM23O75077 832 aa21.31■■□□□ 1
GATC-202ENST00000548171 RTN3O95197 1032 aaPredicted RBP21.31■■□□□ 1
GATC-202ENST00000548171 TOP3BO95985 862 aaKnown RBP21.31■■□□□ 1
GATC-202ENST00000548171 PTPN1P18031 435 aaKnown RBP21.31■■□□□ 1
GATC-202ENST00000548171 YWHAQP27348 245 aa21.31■■□□□ 1
GATC-202ENST00000548171 MAPK8P45983 427 aa21.31■■□□□ 1
GATC-202ENST00000548171 GAD2Q05329 585 aa21.31■■□□□ 1
GATC-202ENST00000548171 KDSRQ06136 332 aa21.31■■□□□ 1
GATC-202ENST00000548171 MESP2Q0VG99 397 aa21.31■■□□□ 1
GATC-202ENST00000548171 EMC10Q5UCC4 262 aa21.31■■□□□ 1
GATC-202ENST00000548171 PEAR1Q5VY43 1037 aaPredicted RBP21.31■■□□□ 1
GATC-202ENST00000548171 NUDT18Q6ZVK8 323 aa21.31■■□□□ 1
GATC-202ENST00000548171 RABEPKQ7Z6M1 372 aa21.31■■□□□ 1
GATC-202ENST00000548171 PGBD3Q8N328 593 aa21.31■■□□□ 1
GATC-202ENST00000548171 PHTF2Q8N3S3 785 aa21.31■■□□□ 1
GATC-202ENST00000548171 OR6B3Q8NGW1 331 aa21.31■■□□□ 1
GATC-202ENST00000548171 CEP76Q8TAP6 659 aa21.31■■□□□ 1
GATC-202ENST00000548171 DUSP9Q99956 384 aaKnown RBP21.31■■□□□ 1
GATC-202ENST00000548171 MRPL45Q9BRJ2 306 aaKnown RBP21.31■■□□□ 1
GATC-202ENST00000548171 LRRC27Q9C0I9 530 aa21.31■■□□□ 1
GATC-202ENST00000548171 TCRBV21S2A2A0A5A6 115 aa21.3■■□□□ 1
GATC-202ENST00000548171 AP5Z1O43299 807 aa21.3■■□□□ 1
GATC-202ENST00000548171 TNNC1P63316 161 aa21.3■■□□□ 1
GATC-202ENST00000548171 LY6G5CQ5SRR4 150 aa21.3■■□□□ 1
GATC-202ENST00000548171 BTBD8Q5XKL5 378 aa21.3■■□□□ 1
GATC-202ENST00000548171 NUP93Q8N1F7 819 aa21.3■■□□□ 1
GATC-202ENST00000548171 UPF2Q9HAU5 1272 aaKnown RBP21.3■■□□□ 1
GATC-202ENST00000548171 PCDH15Q96QU1 1955 aa21.29■■□□□ 1
GATC-202ENST00000548171 TBC1D3BA6NDS4 549 aa21.29■■□□□ 1
GATC-202ENST00000548171 SCAMP3O14828 347 aaKnown RBP21.29■■□□□ 1
GATC-202ENST00000548171 TNNI1P19237 187 aa21.29■■□□□ 1
GATC-202ENST00000548171 RDXP35241 583 aaKnown RBP21.29■■□□□ 1
GATC-202ENST00000548171 TUBP50607 506 aa21.29■■□□□ 1
GATC-202ENST00000548171 ATXN3P54252 364 aaPredicted RBP21.29■■□□□ 1
GATC-202ENST00000548171 GFPT1Q06210 699 aaPredicted RBP21.29■■□□□ 1
GATC-202ENST00000548171 SEMA3BQ13214 749 aa21.29■■□□□ 1
GATC-202ENST00000548171 SNRNP35Q16560 246 aaKnown RBP21.29■■□□□ 1
GATC-202ENST00000548171 DUOXA1Q1HG43 343 aa21.29■■□□□ 1
GATC-202ENST00000548171 WDR72Q3MJ13 1102 aa21.29■■□□□ 1
GATC-202ENST00000548171 SLC36A4Q6YBV0 504 aa21.29■■□□□ 1
GATC-202ENST00000548171 PIP4P1Q86T03 277 aa21.29■■□□□ 1
GATC-202ENST00000548171 FRMD1Q8N878 549 aa21.29■■□□□ 1
GATC-202ENST00000548171 ZCCHC14Q8WYQ9 949 aaKnown RBP21.29■■□□□ 1
GATC-202ENST00000548171 PANK2Q9BZ23 570 aa21.29■■□□□ 1
GATC-202ENST00000548171 ZNF518BQ9C0D4 1074 aa21.29■■□□□ 1
GATC-202ENST00000548171 TNMDQ9H2S6 317 aa21.29■■□□□ 1
GATC-202ENST00000548171 SLC6A14Q9UN76 642 aa21.29■■□□□ 1
GATC-202ENST00000548171 AKAP13Q12802 2813 aa21.29■■□□□ 1
GATC-202ENST00000548171 ZZEF1O43149 2961 aa21.28■■□□□ 1
GATC-202ENST00000548171 EIF3DO15371 548 aaKnown RBP eCLIP21.28■■□□□ 1
GATC-202ENST00000548171 HOXC11O43248 304 aaPredicted RBP21.28■■□□□ 1
GATC-202ENST00000548171 STAU1O95793 577 aaKnown RBP21.28■■□□□ 1
GATC-202ENST00000548171 CST3P01034 146 aaPredicted RBP21.28■■□□□ 1
GATC-202ENST00000548171 CFIP05156 583 aa21.28■■□□□ 1
GATC-202ENST00000548171 DLATP10515 647 aaKnown RBP21.28■■□□□ 1
GATC-202ENST00000548171 ITPKAP23677 461 aa21.28■■□□□ 1
GATC-202ENST00000548171 CACNA2D1P54289 1103 aa21.28■■□□□ 1
GATC-202ENST00000548171 IFRD2Q12894 506 aaPredicted RBP21.28■■□□□ 1
GATC-202ENST00000548171 HECTD3Q5T447 861 aa21.28■■□□□ 1
GATC-202ENST00000548171 SNX30Q5VWJ9 437 aa21.28■■□□□ 1
GATC-202ENST00000548171 ETFBKMTQ8IXQ9 262 aa21.28■■□□□ 1
GATC-202ENST00000548171 HDDC3Q8N4P3 179 aa21.28■■□□□ 1
GATC-202ENST00000548171 ZNF513Q8N8E2 541 aaPredicted RBP21.28■■□□□ 1
GATC-202ENST00000548171 B3GALNT2Q8NCR0 500 aa21.28■■□□□ 1
GATC-202ENST00000548171 FBXO32Q969P5 355 aa21.28■■□□□ 1
GATC-202ENST00000548171 B3GNT5Q9BYG0 378 aa21.28■■□□□ 1
GATC-202ENST00000548171 TMEM30AQ9NV96 361 aa21.28■■□□□ 1
GATC-202ENST00000548171 DEC1Q9P2X7 70 aa21.28■■□□□ 1
GATC-202ENST00000548171 MSRB2Q9Y3D2 182 aa21.28■■□□□ 1
GATC-202ENST00000548171 SH3BP1Q9Y3L3 701 aa21.28■■□□□ 1
GATC-202ENST00000548171 NME7Q9Y5B8 376 aa21.28■■□□□ 1
GATC-202ENST00000548171 ATP8B3O60423 1300 aa21.28■■□□□ 1
GATC-202ENST00000548171 A0A087X0B3 334 aa21.27■■□□□ 1
GATC-202ENST00000548171 SRRM3A6NNA2 597 aaPredicted RBP21.27■■□□□ 1
GATC-202ENST00000548171 A8MXQ7 604 aa21.27■■□□□ 1
GATC-202ENST00000548171 H0Y626 953 aa21.27■■□□□ 1
GATC-202ENST00000548171 COCHO43405 550 aa21.27■■□□□ 1
GATC-202ENST00000548171 TULP3O75386 442 aa21.27■■□□□ 1
GATC-202ENST00000548171 TRIM16O95361 564 aa21.27■■□□□ 1
GATC-202ENST00000548171 SERPINF2P08697 491 aa21.27■■□□□ 1
GATC-202ENST00000548171 SIM1P81133 766 aaPredicted RBP21.27■■□□□ 1
GATC-202ENST00000548171 RPL6Q02878 288 aaKnown RBP21.27■■□□□ 1
GATC-202ENST00000548171 CEBPZQ03701 1054 aaKnown RBP21.27■■□□□ 1
GATC-202ENST00000548171 PSMD6Q15008 389 aa21.27■■□□□ 1
GATC-202ENST00000548171 SLC39A14Q15043 492 aa21.27■■□□□ 1
GATC-202ENST00000548171 KIAA1211LQ6NV74 962 aa21.27■■□□□ 1
GATC-202ENST00000548171 ZFRQ96KR1 1074 aaKnown RBP21.27■■□□□ 1
GATC-202ENST00000548171 CGRRF1Q99675 332 aa21.27■■□□□ 1
GATC-202ENST00000548171 DPEP3Q9H4B8 488 aa21.27■■□□□ 1
GATC-202ENST00000548171 ATXN2Q99700 1313 aaKnown RBP21.27■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms