RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 EYA2O00167 538 aa4.88□□□□□ -1.63
SCAF11-210ENST00000547654 TRIM38O00635 465 aa4.88□□□□□ -1.63
SCAF11-210ENST00000547654 THAP12O43422 761 aa4.88□□□□□ -1.63
SCAF11-210ENST00000547654 ERN1O75460 977 aaKnown RBP4.88□□□□□ -1.63
SCAF11-210ENST00000547654 NPR1P16066 1061 aa4.88□□□□□ -1.63
SCAF11-210ENST00000547654 FGFR2P21802 821 aa4.88□□□□□ -1.63
SCAF11-210ENST00000547654 CNTFP26441 200 aa4.88□□□□□ -1.63
SCAF11-210ENST00000547654 VAV2P52735 878 aa4.88□□□□□ -1.63
SCAF11-210ENST00000547654 GALNT1Q10472 559 aaPredicted RBP4.88□□□□□ -1.63
SCAF11-210ENST00000547654 FOXO1Q12778 655 aa4.88□□□□□ -1.63
SCAF11-210ENST00000547654 TCF15Q12870 199 aa4.88□□□□□ -1.63
SCAF11-210ENST00000547654 ADCK5Q3MIX3 580 aa4.88□□□□□ -1.63
SCAF11-210ENST00000547654 KHDC1Q4VXA5 237 aaKnown RBP4.88□□□□□ -1.63
SCAF11-210ENST00000547654 SLC44A4Q53GD3 710 aa4.88□□□□□ -1.63
SCAF11-210ENST00000547654 KHDC1LQ5JSQ8 128 aa4.88□□□□□ -1.63
SCAF11-210ENST00000547654 ZNF788Q6ZQV5 615 aa4.88□□□□□ -1.63
SCAF11-210ENST00000547654 ESX1Q8N693 406 aa4.88□□□□□ -1.63
SCAF11-210ENST00000547654 ZNF366Q8N895 744 aa4.88□□□□□ -1.63
SCAF11-210ENST00000547654 RUBCNQ92622 972 aa4.88□□□□□ -1.63
SCAF11-210ENST00000547654 TMX3Q96JJ7 454 aa4.88□□□□□ -1.63
SCAF11-210ENST00000547654 ZNF778Q96MU6 729 aa4.88□□□□□ -1.63
SCAF11-210ENST00000547654 UROC1Q96N76 676 aa4.88□□□□□ -1.63
SCAF11-210ENST00000547654 KLHL32Q96NJ5 620 aa4.88□□□□□ -1.63
SCAF11-210ENST00000547654 VRK1Q99986 396 aaPredicted RBP4.88□□□□□ -1.63
SCAF11-210ENST00000547654 OSBPL5Q9H0X9 879 aaPredicted RBP4.88□□□□□ -1.63
SCAF11-210ENST00000547654 WDCPQ9H6R7 721 aa4.88□□□□□ -1.63
SCAF11-210ENST00000547654 UBN1Q9NPG3 1134 aa4.88□□□□□ -1.63
SCAF11-210ENST00000547654 WASH6PQ9NQA3 447 aa4.88□□□□□ -1.63
SCAF11-210ENST00000547654 IL17RBQ9NRM6 502 aa4.88□□□□□ -1.63
SCAF11-210ENST00000547654 TBC1D22BQ9NU19 505 aa4.88□□□□□ -1.63
SCAF11-210ENST00000547654 BLOC1S4Q9NUP1 217 aa4.88□□□□□ -1.63
SCAF11-210ENST00000547654 CALCOCO1Q9P1Z2 691 aa4.88□□□□□ -1.63
SCAF11-210ENST00000547654 MYO1AQ9UBC5 1043 aa4.88□□□□□ -1.63
SCAF11-210ENST00000547654 SLC13A4Q9UKG4 626 aa4.88□□□□□ -1.63
SCAF11-210ENST00000547654 SLC45A2Q9UMX9 530 aa4.88□□□□□ -1.63
SCAF11-210ENST00000547654 SLC45A1Q9Y2W3 748 aa4.88□□□□□ -1.63
SCAF11-210ENST00000547654 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.88□□□□□ -1.63
SCAF11-210ENST00000547654 MYO15BQ96JP2 1530 aa4.87□□□□□ -1.63
SCAF11-210ENST00000547654 CDHR4A6H8M9 788 aa4.87□□□□□ -1.63
SCAF11-210ENST00000547654 A6NCN8 305 aa4.87□□□□□ -1.63
SCAF11-210ENST00000547654 E9PLN8 166 aa4.87□□□□□ -1.63
SCAF11-210ENST00000547654 PODXLO00592 558 aa4.87□□□□□ -1.63
SCAF11-210ENST00000547654 IKBKBO14920 756 aa4.87□□□□□ -1.63
SCAF11-210ENST00000547654 GRM6O15303 877 aa4.87□□□□□ -1.63
SCAF11-210ENST00000547654 PEX1O43933 1283 aa4.87□□□□□ -1.63
SCAF11-210ENST00000547654 FTH1P19P0C7X4 201 aa4.87□□□□□ -1.63
SCAF11-210ENST00000547654 EN2P19622 333 aaPredicted RBP4.87□□□□□ -1.63
SCAF11-210ENST00000547654 MCCP23508 829 aa4.87□□□□□ -1.63
SCAF11-210ENST00000547654 SNAPC2Q13487 334 aa4.87□□□□□ -1.63
SCAF11-210ENST00000547654 TIGD6Q17RP2 521 aa4.87□□□□□ -1.63
SCAF11-210ENST00000547654 PABPC1LQ4VXU2 614 aaKnown RBP4.87□□□□□ -1.63
SCAF11-210ENST00000547654 DSTYKQ6XUX3 929 aa4.87□□□□□ -1.63
SCAF11-210ENST00000547654 C1QL2Q7Z5L3 287 aa4.87□□□□□ -1.63
SCAF11-210ENST00000547654 GRASPQ7Z6J2 395 aaPredicted RBP4.87□□□□□ -1.63
SCAF11-210ENST00000547654 TBC1D1Q86TI0 1168 aaPredicted RBP4.87□□□□□ -1.63
SCAF11-210ENST00000547654 LRRTM4Q86VH4 590 aa4.87□□□□□ -1.63
SCAF11-210ENST00000547654 OR6B3Q8NGW1 331 aa4.87□□□□□ -1.63
SCAF11-210ENST00000547654 VKORC1Q9BQB6 163 aa4.87□□□□□ -1.63
SCAF11-210ENST00000547654 PYM1Q9BRP8 204 aaKnown RBP4.87□□□□□ -1.63
SCAF11-210ENST00000547654 CNPPD1Q9BV87 410 aa4.87□□□□□ -1.63
SCAF11-210ENST00000547654 C1QTNF7Q9BXJ2 289 aa4.87□□□□□ -1.63
SCAF11-210ENST00000547654 IRAK4Q9NWZ3 460 aa4.87□□□□□ -1.63
SCAF11-210ENST00000547654 JKAMPQ9P055 326 aa4.87□□□□□ -1.63
SCAF11-210ENST00000547654 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.87□□□□□ -1.63
SCAF11-210ENST00000547654 ARPP21Q9UBL0 812 aaPredicted RBP4.87□□□□□ -1.63
SCAF11-210ENST00000547654 PCDHA6Q9UN73 950 aa4.87□□□□□ -1.63
SCAF11-210ENST00000547654 PAXBP1Q9Y5B6 917 aa4.87□□□□□ -1.63
SCAF11-210ENST00000547654 A0A1W2PS29 197 aa4.86□□□□□ -1.63
SCAF11-210ENST00000547654 ANKRD18BA2A2Z9 1011 aa4.86□□□□□ -1.63
SCAF11-210ENST00000547654 NPC1O15118 1278 aa4.86□□□□□ -1.63
SCAF11-210ENST00000547654 PROM1O43490 865 aa4.86□□□□□ -1.63
SCAF11-210ENST00000547654 POLBP06746 335 aa4.86□□□□□ -1.63
SCAF11-210ENST00000547654 ANXA2P07355 339 aaKnown RBP4.86□□□□□ -1.63
SCAF11-210ENST00000547654 GPD1P21695 349 aa4.86□□□□□ -1.63
SCAF11-210ENST00000547654 RRM1P23921 792 aa4.86□□□□□ -1.63
SCAF11-210ENST00000547654 SERPINF1P36955 418 aa4.86□□□□□ -1.63
SCAF11-210ENST00000547654 NAP1L1P55209 391 aaKnown RBP4.86□□□□□ -1.63
SCAF11-210ENST00000547654 PROK1P58294 105 aa4.86□□□□□ -1.63
SCAF11-210ENST00000547654 RPS16P62249 146 aaKnown RBP4.86□□□□□ -1.63
SCAF11-210ENST00000547654 MAPK7Q13164 816 aa4.86□□□□□ -1.63
SCAF11-210ENST00000547654 SPARCL1Q14515 664 aa4.86□□□□□ -1.63
SCAF11-210ENST00000547654 FAM133BQ5BKY9 247 aaKnown RBP4.86□□□□□ -1.63
SCAF11-210ENST00000547654 C3orf38Q5JPI3 329 aa4.86□□□□□ -1.63
SCAF11-210ENST00000547654 FBXO47Q5MNV8 452 aa4.86□□□□□ -1.63
SCAF11-210ENST00000547654 ZNF783Q6ZMS7 281 aa4.86□□□□□ -1.63
SCAF11-210ENST00000547654 PTF1AQ7RTS3 328 aa4.86□□□□□ -1.63
SCAF11-210ENST00000547654 FAM90A1Q86YD7 464 aa4.86□□□□□ -1.63
SCAF11-210ENST00000547654 FITM2Q8N6M3 262 aa4.86□□□□□ -1.63
SCAF11-210ENST00000547654 PCYOX1LQ8NBM8 494 aa4.86□□□□□ -1.63
SCAF11-210ENST00000547654 TMIEQ8NEW7 156 aa4.86□□□□□ -1.63
SCAF11-210ENST00000547654 SSH3Q8TE77 659 aa4.86□□□□□ -1.63
SCAF11-210ENST00000547654 C18orf8Q96DM3 657 aa4.86□□□□□ -1.63
SCAF11-210ENST00000547654 NUDT16L1Q9BRJ7 211 aaKnown RBP4.86□□□□□ -1.63
SCAF11-210ENST00000547654 CPNE5Q9HCH3 593 aa4.86□□□□□ -1.63
SCAF11-210ENST00000547654 HELLSQ9NRZ9 838 aa4.86□□□□□ -1.63
SCAF11-210ENST00000547654 TM7SF3Q9NS93 570 aa4.86□□□□□ -1.63
SCAF11-210ENST00000547654 STK32BQ9NY57 414 aa4.86□□□□□ -1.63
SCAF11-210ENST00000547654 ZNF70Q9UC06 446 aaPredicted RBP4.86□□□□□ -1.63
SCAF11-210ENST00000547654 NOL7Q9UMY1 257 aaKnown RBP4.86□□□□□ -1.63
SCAF11-210ENST00000547654 MAN2B2Q9Y2E5 1009 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms