RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 FAM78AQ5JUQ0 283 aa12.79□□□□□ -0.36
HDAC7-226ENST00000547259 SFMBT2Q5VUG0 894 aa12.79□□□□□ -0.36
HDAC7-226ENST00000547259 CNGA4Q8IV77 575 aa12.79□□□□□ -0.36
HDAC7-226ENST00000547259 FMNL3Q8IVF7 1028 aa12.79□□□□□ -0.36
HDAC7-226ENST00000547259 MFSD6LQ8IWD5 586 aa12.79□□□□□ -0.36
HDAC7-226ENST00000547259 YAF2Q8IY57 180 aa12.79□□□□□ -0.36
HDAC7-226ENST00000547259 DCLK2Q8N568 766 aa12.79□□□□□ -0.36
HDAC7-226ENST00000547259 TNIP3Q96KP6 325 aa12.79□□□□□ -0.36
HDAC7-226ENST00000547259 TWNKQ96RR1 684 aa12.79□□□□□ -0.36
HDAC7-226ENST00000547259 ELOVL4Q9GZR5 314 aa12.79□□□□□ -0.36
HDAC7-226ENST00000547259 NUCKS1Q9H1E3 243 aaKnown RBP12.79□□□□□ -0.36
HDAC7-226ENST00000547259 DPEP3Q9H4B8 488 aa12.79□□□□□ -0.36
HDAC7-226ENST00000547259 ZNF334Q9HCZ1 680 aaPredicted RBP12.79□□□□□ -0.36
HDAC7-226ENST00000547259 IMPACTQ9P2X3 320 aa12.79□□□□□ -0.36
HDAC7-226ENST00000547259 CDV3Q9UKY7 258 aaKnown RBP12.79□□□□□ -0.36
HDAC7-226ENST00000547259 CDH9Q9ULB4 789 aa12.79□□□□□ -0.36
HDAC7-226ENST00000547259 NME7Q9Y5B8 376 aa12.79□□□□□ -0.36
HDAC7-226ENST00000547259 PTPRDP23468 1912 aa12.79□□□□□ -0.36
HDAC7-226ENST00000547259 MYH10P35580 1976 aa12.79□□□□□ -0.36
HDAC7-226ENST00000547259 CNOT1A5YKK6 2376 aaKnown RBP12.79□□□□□ -0.36
HDAC7-226ENST00000547259 OR6C75A6NL08 312 aa12.78□□□□□ -0.36
HDAC7-226ENST00000547259 RNF225M0QZC1 329 aaPredicted RBP12.78□□□□□ -0.36
HDAC7-226ENST00000547259 CYP26A1O43174 497 aa12.78□□□□□ -0.36
HDAC7-226ENST00000547259 MFAP3LO75121 409 aa12.78□□□□□ -0.36
HDAC7-226ENST00000547259 CPB1P15086 417 aa12.78□□□□□ -0.36
HDAC7-226ENST00000547259 CD19P15391 556 aa12.78□□□□□ -0.36
HDAC7-226ENST00000547259 FERP16591 822 aa12.78□□□□□ -0.36
HDAC7-226ENST00000547259 GDI1P31150 447 aa12.78□□□□□ -0.36
HDAC7-226ENST00000547259 CNR2P34972 360 aa12.78□□□□□ -0.36
HDAC7-226ENST00000547259 ZNF132P52740 706 aa12.78□□□□□ -0.36
HDAC7-226ENST00000547259 RAD23BP54727 409 aa12.78□□□□□ -0.36
HDAC7-226ENST00000547259 ARID5AQ03989 594 aa12.78□□□□□ -0.36
HDAC7-226ENST00000547259 GOLGA8FQ08AF8 430 aa12.78□□□□□ -0.36
HDAC7-226ENST00000547259 GOLGA8DPQ0D2H9 430 aa12.78□□□□□ -0.36
HDAC7-226ENST00000547259 MTAPQ13126 283 aa12.78□□□□□ -0.36
HDAC7-226ENST00000547259 LRRC32Q14392 662 aa12.78□□□□□ -0.36
HDAC7-226ENST00000547259 INTS6LQ5JSJ4 861 aaKnown RBP12.78□□□□□ -0.36
HDAC7-226ENST00000547259 ACOT1Q86TX2 421 aa12.78□□□□□ -0.36
HDAC7-226ENST00000547259 FAM71AQ8IYT1 594 aa12.78□□□□□ -0.36
HDAC7-226ENST00000547259 SLC4A11Q8NBS3 891 aa12.78□□□□□ -0.36
HDAC7-226ENST00000547259 OR10T2Q8NGX3 314 aa12.78□□□□□ -0.36
HDAC7-226ENST00000547259 CSGALNACT1Q8TDX6 532 aa12.78□□□□□ -0.36
HDAC7-226ENST00000547259 WHAMMQ8TF30 809 aa12.78□□□□□ -0.36
HDAC7-226ENST00000547259 FAM3CQ92520 227 aa12.78□□□□□ -0.36
HDAC7-226ENST00000547259 TMEM176AQ96HP8 235 aa12.78□□□□□ -0.36
HDAC7-226ENST00000547259 ACBD6Q9BR61 282 aa12.78□□□□□ -0.36
HDAC7-226ENST00000547259 RTKNQ9BST9 563 aa12.78□□□□□ -0.36
HDAC7-226ENST00000547259 PLA2G2FQ9BZM2 168 aa12.78□□□□□ -0.36
HDAC7-226ENST00000547259 C8orf33Q9H7E9 229 aaPredicted RBP12.78□□□□□ -0.36
HDAC7-226ENST00000547259 CNTN6Q9UQ52 1028 aa12.78□□□□□ -0.36
HDAC7-226ENST00000547259 ASB3Q9Y575 518 aa12.78□□□□□ -0.36
HDAC7-226ENST00000547259 MED19A0JLT2 244 aaPredicted RBP12.77□□□□□ -0.37
HDAC7-226ENST00000547259 PAEPP09466 180 aa12.77□□□□□ -0.37
HDAC7-226ENST00000547259 OR4Q2P0C623 313 aa12.77□□□□□ -0.37
HDAC7-226ENST00000547259 CCDC172P0C7W6 258 aa12.77□□□□□ -0.37
HDAC7-226ENST00000547259 FCARP24071 287 aa12.77□□□□□ -0.37
HDAC7-226ENST00000547259 GNA15P30679 374 aa12.77□□□□□ -0.37
HDAC7-226ENST00000547259 ALDH1A3P47895 512 aa12.77□□□□□ -0.37
HDAC7-226ENST00000547259 CXCL12P48061 93 aa12.77□□□□□ -0.37
HDAC7-226ENST00000547259 PDE6CP51160 858 aa12.77□□□□□ -0.37
HDAC7-226ENST00000547259 EPHB3P54753 998 aa12.77□□□□□ -0.37
HDAC7-226ENST00000547259 ADKP55263 362 aaKnown RBP12.77□□□□□ -0.37
HDAC7-226ENST00000547259 BPIFB4P59827 614 aa12.77□□□□□ -0.37
HDAC7-226ENST00000547259 PTK2Q05397 1052 aa12.77□□□□□ -0.37
HDAC7-226ENST00000547259 TWF1Q12792 350 aa12.77□□□□□ -0.37
HDAC7-226ENST00000547259 FZD5Q13467 585 aa12.77□□□□□ -0.37
HDAC7-226ENST00000547259 TSR1Q2NL82 804 aaKnown RBP12.77□□□□□ -0.37
HDAC7-226ENST00000547259 MDH1BQ5I0G3 518 aa12.77□□□□□ -0.37
HDAC7-226ENST00000547259 SMYD5Q6GMV2 418 aa12.77□□□□□ -0.37
HDAC7-226ENST00000547259 LAIR1Q6GTX8 287 aa12.77□□□□□ -0.37
HDAC7-226ENST00000547259 DCP1BQ8IZD4 617 aaKnown RBP12.77□□□□□ -0.37
HDAC7-226ENST00000547259 B3GALNT2Q8NCR0 500 aa12.77□□□□□ -0.37
HDAC7-226ENST00000547259 HEXIM2Q96MH2 286 aaKnown RBP12.77□□□□□ -0.37
HDAC7-226ENST00000547259 TMEM209Q96SK2 561 aa12.77□□□□□ -0.37
HDAC7-226ENST00000547259 SLITRK6Q9H5Y7 841 aa12.77□□□□□ -0.37
HDAC7-226ENST00000547259 LMAN1LQ9HAT1 526 aa12.77□□□□□ -0.37
HDAC7-226ENST00000547259 ABHD10Q9NUJ1 306 aa12.77□□□□□ -0.37
HDAC7-226ENST00000547259 FAM49BQ9NUQ9 324 aa12.77□□□□□ -0.37
HDAC7-226ENST00000547259 HSFX1Q9UBD0 423 aa12.77□□□□□ -0.37
HDAC7-226ENST00000547259 ZMYM5Q9UJ78 669 aa12.77□□□□□ -0.37
HDAC7-226ENST00000547259 NDRG2Q9UN36 371 aaKnown RBP12.77□□□□□ -0.37
HDAC7-226ENST00000547259 PIAS3Q9Y6X2 628 aa12.77□□□□□ -0.37
HDAC7-226ENST00000547259 TICRRQ7Z2Z1 1910 aa12.77□□□□□ -0.37
HDAC7-226ENST00000547259 SPAG17Q6Q759 2223 aa12.76□□□□□ -0.37
HDAC7-226ENST00000547259 CHADO15335 359 aa12.76□□□□□ -0.37
HDAC7-226ENST00000547259 THAP12O43422 761 aa12.76□□□□□ -0.37
HDAC7-226ENST00000547259 ATP2C2O75185 946 aa12.76□□□□□ -0.37
HDAC7-226ENST00000547259 SEC24AO95486 1093 aa12.76□□□□□ -0.37
HDAC7-226ENST00000547259 CALCAP01258 141 aa12.76□□□□□ -0.37
HDAC7-226ENST00000547259 MYL4P12829 197 aa12.76□□□□□ -0.37
HDAC7-226ENST00000547259 PTPN1P18031 435 aaKnown RBP12.76□□□□□ -0.37
HDAC7-226ENST00000547259 BRD2P25440 801 aaKnown RBP12.76□□□□□ -0.37
HDAC7-226ENST00000547259 CLCN1P35523 988 aa12.76□□□□□ -0.37
HDAC7-226ENST00000547259 GRM2Q14416 872 aa12.76□□□□□ -0.37
HDAC7-226ENST00000547259 MAPRE1Q15691 268 aaKnown RBP12.76□□□□□ -0.37
HDAC7-226ENST00000547259 SLC39A12Q504Y0 691 aa12.76□□□□□ -0.37
HDAC7-226ENST00000547259 SGO2Q562F6 1265 aa12.76□□□□□ -0.37
HDAC7-226ENST00000547259 TDRD12Q587J7 1177 aaKnown RBP12.76□□□□□ -0.37
HDAC7-226ENST00000547259 DGKKQ5KSL6 1271 aa12.76□□□□□ -0.37
HDAC7-226ENST00000547259 ITIH5Q86UX2 942 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms