RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 WHAMMQ8TF30 809 aa10.94□□□□□ -0.66
BEST3-208ENST00000547208 ATRIPQ8WXE1 791 aa10.94□□□□□ -0.66
BEST3-208ENST00000547208 EZH1Q92800 747 aaPredicted RBP10.94□□□□□ -0.66
BEST3-208ENST00000547208 SEMA4DQ92854 862 aa10.94□□□□□ -0.66
BEST3-208ENST00000547208 SMARCD1Q96GM5 515 aa10.94□□□□□ -0.66
BEST3-208ENST00000547208 GSDMAQ96QA5 445 aa10.94□□□□□ -0.66
BEST3-208ENST00000547208 SMOQ99835 787 aa10.94□□□□□ -0.66
BEST3-208ENST00000547208 TMEM8AQ9HCN3 771 aa10.94□□□□□ -0.66
BEST3-208ENST00000547208 DMAP1Q9NPF5 467 aaPredicted RBP10.94□□□□□ -0.66
BEST3-208ENST00000547208 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.94□□□□□ -0.66
BEST3-208ENST00000547208 KRT82Q9NSB4 513 aa10.94□□□□□ -0.66
BEST3-208ENST00000547208 DUS2Q9NX74 493 aaKnown RBP10.94□□□□□ -0.66
BEST3-208ENST00000547208 PCDHA5Q9Y5H7 936 aa10.94□□□□□ -0.66
BEST3-208ENST00000547208 ACACBO00763 2458 aa10.93□□□□□ -0.66
BEST3-208ENST00000547208 ATP8B3O60423 1300 aa10.93□□□□□ -0.66
BEST3-208ENST00000547208 MYO18AQ92614 2054 aaKnown RBP10.93□□□□□ -0.66
BEST3-208ENST00000547208 LEFTY2O00292 366 aa10.93□□□□□ -0.66
BEST3-208ENST00000547208 CILPO75339 1184 aa10.93□□□□□ -0.66
BEST3-208ENST00000547208 AP1G2O75843 785 aa10.93□□□□□ -0.66
BEST3-208ENST00000547208 RTN3O95197 1032 aaPredicted RBP10.93□□□□□ -0.66
BEST3-208ENST00000547208 EGFP01133 1207 aa10.93□□□□□ -0.66
BEST3-208ENST00000547208 ZDHHC11BP0C7U3 371 aa10.93□□□□□ -0.66
BEST3-208ENST00000547208 KRT13P13646 458 aa10.93□□□□□ -0.66
BEST3-208ENST00000547208 GTF2H1P32780 548 aa10.93□□□□□ -0.66
BEST3-208ENST00000547208 TIE1P35590 1138 aa10.93□□□□□ -0.66
BEST3-208ENST00000547208 PGFP49763 221 aa10.93□□□□□ -0.66
BEST3-208ENST00000547208 NRLP54845 237 aa10.93□□□□□ -0.66
BEST3-208ENST00000547208 IFRD2Q12894 506 aaPredicted RBP10.93□□□□□ -0.66
BEST3-208ENST00000547208 CPA6Q8N4T0 437 aa10.93□□□□□ -0.66
BEST3-208ENST00000547208 KIAA1958Q8N8K9 716 aa10.93□□□□□ -0.66
BEST3-208ENST00000547208 SLC2A14Q8TDB8 520 aa10.93□□□□□ -0.66
BEST3-208ENST00000547208 OVCA2Q8WZ82 227 aa10.93□□□□□ -0.66
BEST3-208ENST00000547208 RUBCNQ92622 972 aa10.93□□□□□ -0.66
BEST3-208ENST00000547208 ATP2A3Q93084 1043 aa10.93□□□□□ -0.66
BEST3-208ENST00000547208 FBXO32Q969P5 355 aa10.93□□□□□ -0.66
BEST3-208ENST00000547208 ZFRQ96KR1 1074 aaKnown RBP10.93□□□□□ -0.66
BEST3-208ENST00000547208 TIGD1Q96MW7 591 aa10.93□□□□□ -0.66
BEST3-208ENST00000547208 SLITRK1Q96PX8 696 aa10.93□□□□□ -0.66
BEST3-208ENST00000547208 MED10Q9BTT4 135 aa10.93□□□□□ -0.66
BEST3-208ENST00000547208 MMRN2Q9H8L6 949 aa10.93□□□□□ -0.66
BEST3-208ENST00000547208 FAM49BQ9NUQ9 324 aa10.93□□□□□ -0.66
BEST3-208ENST00000547208 RMND1Q9NWS8 449 aa10.93□□□□□ -0.66
BEST3-208ENST00000547208 CPQQ9Y646 472 aa10.93□□□□□ -0.66
BEST3-208ENST00000547208 PLXND1Q9Y4D7 1925 aa10.93□□□□□ -0.66
BEST3-208ENST00000547208 HHLA1C9JL84 531 aa10.92□□□□□ -0.66
BEST3-208ENST00000547208 COCHO43405 550 aa10.92□□□□□ -0.66
BEST3-208ENST00000547208 CLSTN1O94985 981 aa10.92□□□□□ -0.66
BEST3-208ENST00000547208 HOXA6P31267 233 aa10.92□□□□□ -0.66
BEST3-208ENST00000547208 IFNAR2P48551 515 aa10.92□□□□□ -0.66
BEST3-208ENST00000547208 TUBP50607 506 aa10.92□□□□□ -0.66
BEST3-208ENST00000547208 GALK1P51570 392 aa10.92□□□□□ -0.66
BEST3-208ENST00000547208 GRSF1Q12849 480 aaKnown RBP eCLIP10.92□□□□□ -0.66
BEST3-208ENST00000547208 PPP2R5DQ14738 602 aa10.92□□□□□ -0.66
BEST3-208ENST00000547208 KRT39Q6A163 491 aa10.92□□□□□ -0.66
BEST3-208ENST00000547208 ANKRD40Q6AI12 368 aa10.92□□□□□ -0.66
BEST3-208ENST00000547208 CLEC20AQ6ZU45 233 aa10.92□□□□□ -0.66
BEST3-208ENST00000547208 GPRIN1Q7Z2K8 1008 aa10.92□□□□□ -0.66
BEST3-208ENST00000547208 FILIP1Q7Z7B0 1213 aa10.92□□□□□ -0.66
BEST3-208ENST00000547208 ELOA2Q8IYF1 753 aaPredicted RBP10.92□□□□□ -0.66
BEST3-208ENST00000547208 TTC16Q8NEE8 873 aa10.92□□□□□ -0.66
BEST3-208ENST00000547208 PDZD8Q8NEN9 1154 aa10.92□□□□□ -0.66
BEST3-208ENST00000547208 CCDC34Q96HJ3 373 aa10.92□□□□□ -0.66
BEST3-208ENST00000547208 HNRNPABQ99729 332 aaKnown RBP10.92□□□□□ -0.66
BEST3-208ENST00000547208 P2RY13Q9BPV8 354 aa10.92□□□□□ -0.66
BEST3-208ENST00000547208 NIF3L1Q9GZT8 377 aa10.92□□□□□ -0.66
BEST3-208ENST00000547208 CYP3A43Q9HB55 503 aa10.92□□□□□ -0.66
BEST3-208ENST00000547208 COMMD8Q9NX08 183 aa10.92□□□□□ -0.66
BEST3-208ENST00000547208 SMPD4Q9NXE4 827 aa10.92□□□□□ -0.66
BEST3-208ENST00000547208 GMIPQ9P107 970 aa10.92□□□□□ -0.66
BEST3-208ENST00000547208 CHORDC1Q9UHD1 332 aaPredicted RBP10.92□□□□□ -0.66
BEST3-208ENST00000547208 SMG5Q9UPR3 1016 aaKnown RBP10.92□□□□□ -0.66
BEST3-208ENST00000547208 CEP192Q8TEP8 1941 aa10.92□□□□□ -0.66
BEST3-208ENST00000547208 CFAP47Q6ZTR5 3102 aa10.91□□□□□ -0.66
BEST3-208ENST00000547208 TNRC6BQ9UPQ9 1833 aaKnown RBP10.91□□□□□ -0.66
BEST3-208ENST00000547208 NUP205Q92621 2012 aa10.91□□□□□ -0.66
BEST3-208ENST00000547208 TRIM49BA6NDI0 452 aa10.91□□□□□ -0.66
BEST3-208ENST00000547208 GOLGA6L4A6NEF3 574 aa10.91□□□□□ -0.66
BEST3-208ENST00000547208 CHURC1-FNTBB4DL54 471 aa10.91□□□□□ -0.66
BEST3-208ENST00000547208 CETN3O15182 167 aa10.91□□□□□ -0.66
BEST3-208ENST00000547208 SLC16A3O15427 465 aaKnown RBP10.91□□□□□ -0.66
BEST3-208ENST00000547208 HRO43593 1189 aa10.91□□□□□ -0.66
BEST3-208ENST00000547208 RNF40O75150 1001 aa10.91□□□□□ -0.66
BEST3-208ENST00000547208 ABL1P00519 1130 aa10.91□□□□□ -0.66
BEST3-208ENST00000547208 CYP17A1P05093 508 aa10.91□□□□□ -0.66
BEST3-208ENST00000547208 EPB41P11171 864 aaKnown RBP10.91□□□□□ -0.66
BEST3-208ENST00000547208 CD58P19256 250 aa10.91□□□□□ -0.66
BEST3-208ENST00000547208 DRD1P21728 446 aa10.91□□□□□ -0.66
BEST3-208ENST00000547208 BMP6P22004 513 aa10.91□□□□□ -0.66
BEST3-208ENST00000547208 TGM1P22735 817 aa10.91□□□□□ -0.66
BEST3-208ENST00000547208 OPRD1P41143 372 aa10.91□□□□□ -0.66
BEST3-208ENST00000547208 FNTBP49356 437 aa10.91□□□□□ -0.66
BEST3-208ENST00000547208 MXI1P50539 228 aa10.91□□□□□ -0.66
BEST3-208ENST00000547208 MAP3K7CLP57077 242 aa10.91□□□□□ -0.66
BEST3-208ENST00000547208 AMPD2Q01433 879 aa10.91□□□□□ -0.66
BEST3-208ENST00000547208 CBWD6Q4V339 395 aa10.91□□□□□ -0.66
BEST3-208ENST00000547208 CBWD3Q5JTY5 395 aa10.91□□□□□ -0.66
BEST3-208ENST00000547208 CBWD5Q5RIA9 395 aa10.91□□□□□ -0.66
BEST3-208ENST00000547208 DGLUCYQ7Z3D6 616 aa10.91□□□□□ -0.66
BEST3-208ENST00000547208 ADGRG2Q8IZP9 1017 aa10.91□□□□□ -0.66
BEST3-208ENST00000547208 FBXL13Q8NEE6 735 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms