RNA–Protein interactions for RNA: ENST00000546411.6

CUX1-211, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-211ENST00000546411 LGALS2P05162 132 aa16.27■□□□□ 0.19
CUX1-211ENST00000546411 CPB1P15086 417 aa16.27■□□□□ 0.19
CUX1-211ENST00000546411 ABCG1P45844 678 aa16.27■□□□□ 0.19
CUX1-211ENST00000546411 DRG2P55039 364 aaKnown RBP16.27■□□□□ 0.19
CUX1-211ENST00000546411 NSUN2Q08J23 767 aaKnown RBP eCLIP16.27■□□□□ 0.19
CUX1-211ENST00000546411 FAAP100Q0VG06 881 aa16.27■□□□□ 0.19
CUX1-211ENST00000546411 ITIH4Q14624 930 aa16.27■□□□□ 0.19
CUX1-211ENST00000546411 PDK1Q15118 436 aa16.27■□□□□ 0.19
CUX1-211ENST00000546411 KBTBD12Q3ZCT8 623 aa16.27■□□□□ 0.19
CUX1-211ENST00000546411 SLC2A14Q8TDB8 520 aa16.27■□□□□ 0.19
CUX1-211ENST00000546411 TMEM51Q9NW97 253 aa16.27■□□□□ 0.19
CUX1-211ENST00000546411 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.27■□□□□ 0.19
CUX1-211ENST00000546411 PDHXO00330 501 aa16.26■□□□□ 0.19
CUX1-211ENST00000546411 DHX15O43143 795 aaKnown RBP16.26■□□□□ 0.19
CUX1-211ENST00000546411 POLBP06746 335 aa16.26■□□□□ 0.19
CUX1-211ENST00000546411 SOX11P35716 441 aa16.26■□□□□ 0.19
CUX1-211ENST00000546411 GLRBP48167 497 aa16.26■□□□□ 0.19
CUX1-211ENST00000546411 MMP14P50281 582 aa16.26■□□□□ 0.19
CUX1-211ENST00000546411 SLC26A2P50443 739 aa16.26■□□□□ 0.19
CUX1-211ENST00000546411 KIF19Q2TAC6 998 aa16.26■□□□□ 0.19
CUX1-211ENST00000546411 KLC3Q6P597 504 aa16.26■□□□□ 0.19
CUX1-211ENST00000546411 ZCCHC23Q6ZST2 131 aa16.26■□□□□ 0.19
CUX1-211ENST00000546411 PRPF39Q86UA1 669 aaKnown RBP16.26■□□□□ 0.19
CUX1-211ENST00000546411 SPATA24Q86W54 205 aa16.26■□□□□ 0.19
CUX1-211ENST00000546411 PRCCQ92733 491 aaPredicted RBP16.26■□□□□ 0.19
CUX1-211ENST00000546411 FAM136AQ96C01 138 aa16.26■□□□□ 0.19
CUX1-211ENST00000546411 ATP8B3O60423 1300 aa16.26■□□□□ 0.19
CUX1-211ENST00000546411 MAFO75444 373 aaPredicted RBP16.26■□□□□ 0.19
CUX1-211ENST00000546411 CFHP08603 1231 aa16.26■□□□□ 0.19
CUX1-211ENST00000546411 SV2CQ496J9 727 aa16.26■□□□□ 0.19
CUX1-211ENST00000546411 DCAF12L1Q5VU92 463 aa16.26■□□□□ 0.19
CUX1-211ENST00000546411 AGGF1Q8N302 714 aaeCLIP16.26■□□□□ 0.192e-7■■■■■ 57.8
CUX1-211ENST00000546411 SPDL1Q96EA4 605 aa16.26■□□□□ 0.19
CUX1-211ENST00000546411 ARHGAP28Q9P2N2 729 aa16.26■□□□□ 0.19
CUX1-211ENST00000546411 MID2Q9UJV3 735 aa16.26■□□□□ 0.19
CUX1-211ENST00000546411 ADAMTSL3P82987 1691 aa16.26■□□□□ 0.19
CUX1-211ENST00000546411 KLRG2A4D1S0 409 aaPredicted RBP16.26■□□□□ 0.19
CUX1-211ENST00000546411 CASTOR2A6NHX0 329 aa16.26■□□□□ 0.19
CUX1-211ENST00000546411 AVILO75366 819 aa16.26■□□□□ 0.19
CUX1-211ENST00000546411 FARP2O94887 1054 aaPredicted RBP16.26■□□□□ 0.19
CUX1-211ENST00000546411 RPL22P35268 128 aaKnown RBP16.26■□□□□ 0.19
CUX1-211ENST00000546411 ADIGQ0VDE8 80 aa16.26■□□□□ 0.19
CUX1-211ENST00000546411 CELF3Q5SZQ8 465 aaKnown RBP16.26■□□□□ 0.19
CUX1-211ENST00000546411 ADGRF2Q8IZF7 708 aa16.26■□□□□ 0.19
CUX1-211ENST00000546411 ZCCHC9Q8N567 271 aaKnown RBP16.26■□□□□ 0.19
CUX1-211ENST00000546411 PARK7Q99497 189 aaKnown RBP16.26■□□□□ 0.19
CUX1-211ENST00000546411 SP110Q9HB58 689 aa16.26■□□□□ 0.19
CUX1-211ENST00000546411 ARMCX1Q9P291 453 aa16.26■□□□□ 0.19
CUX1-211ENST00000546411 ALS2Q96Q42 1657 aa16.26■□□□□ 0.19
CUX1-211ENST00000546411 ADGRA3Q8IWK6 1321 aa16.26■□□□□ 0.19
CUX1-211ENST00000546411 GOLGA8TH3BQL2 631 aa16.25■□□□□ 0.19
CUX1-211ENST00000546411 SH3BP5O60239 455 aa16.25■□□□□ 0.19
CUX1-211ENST00000546411 ZNF268Q14587 947 aaPredicted RBP16.25■□□□□ 0.19
CUX1-211ENST00000546411 PTPN20Q4JDL3 420 aa16.25■□□□□ 0.19
CUX1-211ENST00000546411 RAB44Q7Z6P3 723 aaPredicted RBP16.25■□□□□ 0.19
CUX1-211ENST00000546411 RIOX2Q8IUF8 465 aa16.25■□□□□ 0.19
CUX1-211ENST00000546411 CELF6Q96J87 481 aaKnown RBP16.25■□□□□ 0.19
CUX1-211ENST00000546411 APOBEC3GQ9HC16 384 aaKnown RBP16.25■□□□□ 0.19
CUX1-211ENST00000546411 AIM2O14862 343 aa16.25■□□□□ 0.19
CUX1-211ENST00000546411 SNX3O60493 162 aa16.25■□□□□ 0.19
CUX1-211ENST00000546411 NUDT17P0C025 328 aa16.25■□□□□ 0.19
CUX1-211ENST00000546411 TCN1P20061 433 aaPredicted RBP16.25■□□□□ 0.19
CUX1-211ENST00000546411 DRD4P21917 467 aa16.25■□□□□ 0.19
CUX1-211ENST00000546411 ACAD11Q709F0 780 aa16.25■□□□□ 0.19
CUX1-211ENST00000546411 SLFN11Q7Z7L1 901 aa16.25■□□□□ 0.19
CUX1-211ENST00000546411 SPATA2LQ8IUW3 424 aaPredicted RBP16.25■□□□□ 0.19
CUX1-211ENST00000546411 DDX27Q96GQ7 796 aaKnown RBP16.25■□□□□ 0.19
CUX1-211ENST00000546411 C12orf65Q9H3J6 166 aaKnown RBP16.25■□□□□ 0.19
CUX1-211ENST00000546411 KDM4CQ9H3R0 1056 aa16.25■□□□□ 0.19
CUX1-211ENST00000546411 JCHAINP01591 159 aa16.25■□□□□ 0.19
CUX1-211ENST00000546411 TPH1P17752 444 aa16.25■□□□□ 0.19
CUX1-211ENST00000546411 PAMP19021 973 aa16.25■□□□□ 0.19
CUX1-211ENST00000546411 RPL10AP62906 217 aaKnown RBP16.25■□□□□ 0.19
CUX1-211ENST00000546411 COG7P83436 770 aa16.25■□□□□ 0.19
CUX1-211ENST00000546411 FASTKD3Q14CZ7 662 aaKnown RBP16.25■□□□□ 0.19
CUX1-211ENST00000546411 ZC3H12AQ5D1E8 599 aaKnown RBP16.25■□□□□ 0.19
CUX1-211ENST00000546411 KCNT2Q6UVM3 1135 aa16.25■□□□□ 0.19
CUX1-211ENST00000546411 SLC26A11Q86WA9 606 aa16.25■□□□□ 0.19
CUX1-211ENST00000546411 FUKQ8N0W3 1084 aa16.25■□□□□ 0.19
CUX1-211ENST00000546411 GPC2Q8N158 579 aa16.25■□□□□ 0.19
CUX1-211ENST00000546411 CYP3A43Q9HB55 503 aa16.25■□□□□ 0.19
CUX1-211ENST00000546411 TRIM33Q9UPN9 1127 aa16.25■□□□□ 0.19
CUX1-211ENST00000546411 ZMYM2Q9UBW7 1377 aa16.25■□□□□ 0.19
CUX1-211ENST00000546411 RRN3P2A6NIE6 340 aa16.24■□□□□ 0.19
CUX1-211ENST00000546411 SPAG6O75602 509 aa16.24■□□□□ 0.19
CUX1-211ENST00000546411 ANP32DO95626 131 aa16.24■□□□□ 0.19
CUX1-211ENST00000546411 MMP8P22894 467 aa16.24■□□□□ 0.19
CUX1-211ENST00000546411 ACADSBP45954 432 aa16.24■□□□□ 0.19
CUX1-211ENST00000546411 FSCBQ5H9T9 825 aa16.24■□□□□ 0.19
CUX1-211ENST00000546411 PTPRN2Q92932 1015 aa16.24■□□□□ 0.19
CUX1-211ENST00000546411 MTBPQ96DY7 904 aa16.24■□□□□ 0.19
CUX1-211ENST00000546411 TMEM134Q9H6X4 195 aa16.24■□□□□ 0.19
CUX1-211ENST00000546411 ABI2Q9NYB9 513 aaPredicted RBP16.24■□□□□ 0.19
CUX1-211ENST00000546411 EPS15L1Q9UBC2 864 aa16.24■□□□□ 0.19
CUX1-211ENST00000546411 ZNF214Q9UL59 606 aaPredicted RBP16.24■□□□□ 0.19
CUX1-211ENST00000546411 GRID1Q9ULK0 1009 aa16.24■□□□□ 0.19
CUX1-211ENST00000546411 TAF1P21675 1872 aa16.24■□□□□ 0.19
CUX1-211ENST00000546411 CICQ96RK0 1608 aaPredicted RBP16.24■□□□□ 0.19
CUX1-211ENST00000546411 RECQL4O94761 1208 aa16.24■□□□□ 0.19
CUX1-211ENST00000546411 TGM2P21980 687 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms