RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 GPD2P43304 727 aa16.48■□□□□ 0.23
LDLR-204ENST00000545707 ZC3H12AQ5D1E8 599 aaKnown RBP16.48■□□□□ 0.23
LDLR-204ENST00000545707 JADE1Q6IE81 842 aa16.48■□□□□ 0.23
LDLR-204ENST00000545707 METTL7BQ6UX53 244 aa16.48■□□□□ 0.23
LDLR-204ENST00000545707 TSHZ1Q6ZSZ6 1077 aa16.48■□□□□ 0.23
LDLR-204ENST00000545707 SH2D5Q6ZV89 423 aa16.48■□□□□ 0.23
LDLR-204ENST00000545707 CYP4V2Q6ZWL3 525 aaPredicted RBP16.48■□□□□ 0.23
LDLR-204ENST00000545707 APBB1IPQ7Z5R6 666 aaPredicted RBP16.48■□□□□ 0.23
LDLR-204ENST00000545707 CHST13Q8NET6 341 aa16.48■□□□□ 0.23
LDLR-204ENST00000545707 TRPM4Q8TD43 1214 aa16.48■□□□□ 0.23
LDLR-204ENST00000545707 SLC44A1Q8WWI5 657 aa16.48■□□□□ 0.23
LDLR-204ENST00000545707 RXFP2Q8WXD0 754 aa16.48■□□□□ 0.23
LDLR-204ENST00000545707 BCO2Q9BYV7 579 aa16.48■□□□□ 0.23
LDLR-204ENST00000545707 RPF1Q9H9Y2 349 aaKnown RBP16.48■□□□□ 0.23
LDLR-204ENST00000545707 SIP14410 1827 aa16.47■□□□□ 0.23
LDLR-204ENST00000545707 KAT6AQ92794 2004 aa16.47■□□□□ 0.23
LDLR-204ENST00000545707 IQANK1A0A1B0GTG1 560 aa16.47■□□□□ 0.23
LDLR-204ENST00000545707 FAM237BA0A1B0GVD1 139 aa16.47■□□□□ 0.23
LDLR-204ENST00000545707 TRIM49D1C9J1S8 452 aa16.47■□□□□ 0.23
LDLR-204ENST00000545707 ACKR2O00590 384 aa16.47■□□□□ 0.23
LDLR-204ENST00000545707 TRAFD1O14545 582 aaPredicted RBP16.47■□□□□ 0.23
LDLR-204ENST00000545707 KCNN4O15554 427 aa16.47■□□□□ 0.23
LDLR-204ENST00000545707 HAUS5O94927 633 aa16.47■□□□□ 0.23
LDLR-204ENST00000545707 PDGFRAP16234 1089 aa16.47■□□□□ 0.23
LDLR-204ENST00000545707 CYP3A5P20815 502 aa16.47■□□□□ 0.23
LDLR-204ENST00000545707 PTDSS1P48651 473 aaKnown RBP16.47■□□□□ 0.23
LDLR-204ENST00000545707 RGS7P49802 495 aa16.47■□□□□ 0.23
LDLR-204ENST00000545707 NEK3P51956 506 aa16.47■□□□□ 0.23
LDLR-204ENST00000545707 CCNG1P51959 295 aa16.47■□□□□ 0.23
LDLR-204ENST00000545707 IGBP1P78318 339 aa16.47■□□□□ 0.23
LDLR-204ENST00000545707 BMPR2Q13873 1038 aa16.47■□□□□ 0.23
LDLR-204ENST00000545707 MXD4Q14582 209 aaPredicted RBP16.47■□□□□ 0.23
LDLR-204ENST00000545707 KCNJ11Q14654 390 aa16.47■□□□□ 0.23
LDLR-204ENST00000545707 SURF1Q15526 300 aa16.47■□□□□ 0.23
LDLR-204ENST00000545707 DALRD3Q5D0E6 543 aaKnown RBP16.47■□□□□ 0.23
LDLR-204ENST00000545707 OR6B2Q6IFH4 312 aa16.47■□□□□ 0.23
LDLR-204ENST00000545707 C12orf29Q8N999 325 aa16.47■□□□□ 0.23
LDLR-204ENST00000545707 MCRS1Q96EZ8 462 aa16.47■□□□□ 0.23
LDLR-204ENST00000545707 TMEM176AQ96HP8 235 aa16.47■□□□□ 0.23
LDLR-204ENST00000545707 NOP56O00567 594 aaKnown RBP16.47■□□□□ 0.23
LDLR-204ENST00000545707 NEBLO76041 1014 aa16.47■□□□□ 0.23
LDLR-204ENST00000545707 RPS12P25398 132 aaKnown RBP16.47■□□□□ 0.23
LDLR-204ENST00000545707 CPA2P48052 419 aa16.47■□□□□ 0.23
LDLR-204ENST00000545707 PRKD1Q15139 912 aaPredicted RBP16.47■□□□□ 0.23
LDLR-204ENST00000545707 NOMO1Q15155 1222 aa16.47■□□□□ 0.23
LDLR-204ENST00000545707 RINLQ6ZS11 566 aa16.47■□□□□ 0.23
LDLR-204ENST00000545707 RFX8Q6ZV50 586 aa16.47■□□□□ 0.23
LDLR-204ENST00000545707 SPDL1Q96EA4 605 aa16.47■□□□□ 0.23
LDLR-204ENST00000545707 APOPT1Q96IL0 206 aa16.47■□□□□ 0.23
LDLR-204ENST00000545707 FAXDC2Q96IV6 333 aa16.47■□□□□ 0.23
LDLR-204ENST00000545707 GPR20Q99678 358 aa16.47■□□□□ 0.23
LDLR-204ENST00000545707 SLC13A1Q9BZW2 595 aa16.47■□□□□ 0.23
LDLR-204ENST00000545707 RSAD1Q9HA92 442 aa16.47■□□□□ 0.23
LDLR-204ENST00000545707 USP29Q9HBJ7 922 aa16.47■□□□□ 0.23
LDLR-204ENST00000545707 CILPO75339 1184 aa16.46■□□□□ 0.23
LDLR-204ENST00000545707 DLDP09622 509 aaKnown RBP16.46■□□□□ 0.23
LDLR-204ENST00000545707 DHRS4L1P0CG22 281 aa16.46■□□□□ 0.23
LDLR-204ENST00000545707 MYL2P10916 166 aa16.46■□□□□ 0.23
LDLR-204ENST00000545707 RBL1P28749 1068 aa16.46■□□□□ 0.23
LDLR-204ENST00000545707 ERFP50548 548 aa16.46■□□□□ 0.23
LDLR-204ENST00000545707 LBX2Q6XYB7 198 aa16.46■□□□□ 0.23
LDLR-204ENST00000545707 C4orf50Q6ZRC1 276 aa16.46■□□□□ 0.23
LDLR-204ENST00000545707 ALYREFQ86V81 257 aaKnown RBP16.46■□□□□ 0.23
LDLR-204ENST00000545707 ALKBH8Q96BT7 664 aaKnown RBP16.46■□□□□ 0.23
LDLR-204ENST00000545707 PTCD3Q96EY7 689 aaKnown RBP16.46■□□□□ 0.23
LDLR-204ENST00000545707 CPB2Q96IY4 423 aa16.46■□□□□ 0.23
LDLR-204ENST00000545707 FRMD8P1Q9BZ68 369 aaPredicted RBP16.46■□□□□ 0.23
LDLR-204ENST00000545707 MAGEB5Q9BZ81 275 aa16.46■□□□□ 0.23
LDLR-204ENST00000545707 FZD8Q9H461 694 aa16.46■□□□□ 0.23
LDLR-204ENST00000545707 SAR1AQ9NR31 198 aa16.46■□□□□ 0.23
LDLR-204ENST00000545707 ASNSD1Q9NWL6 643 aa16.46■□□□□ 0.23
LDLR-204ENST00000545707 LNPEPQ9UIQ6 1025 aa16.46■□□□□ 0.23
LDLR-204ENST00000545707 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.46■□□□□ 0.23
LDLR-204ENST00000545707 DOCK1Q14185 1865 aa16.46■□□□□ 0.23
LDLR-204ENST00000545707 CCDC195A0A1B0GUA6 201 aa16.46■□□□□ 0.23
LDLR-204ENST00000545707 CYB561D2O14569 222 aa16.46■□□□□ 0.23
LDLR-204ENST00000545707 HMGCRP04035 888 aa16.46■□□□□ 0.23
LDLR-204ENST00000545707 PDHA1P08559 390 aa16.46■□□□□ 0.23
LDLR-204ENST00000545707 RXRBP28702 533 aa16.46■□□□□ 0.23
LDLR-204ENST00000545707 SERPINB4P48594 390 aa16.46■□□□□ 0.23
LDLR-204ENST00000545707 YWHAZP63104 245 aaKnown RBP16.46■□□□□ 0.23
LDLR-204ENST00000545707 CA9Q16790 459 aa16.46■□□□□ 0.23
LDLR-204ENST00000545707 CES4AQ5XG92 561 aa16.46■□□□□ 0.23
LDLR-204ENST00000545707 ZNF772Q68DY9 489 aaPredicted RBP16.46■□□□□ 0.23
LDLR-204ENST00000545707 EFCAB12Q6NXP0 572 aa16.46■□□□□ 0.23
LDLR-204ENST00000545707 FAM183BPQ6ZVS7 135 aa16.46■□□□□ 0.23
LDLR-204ENST00000545707 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.46■□□□□ 0.23
LDLR-204ENST00000545707 SRPK1Q96SB4 655 aaKnown RBP16.46■□□□□ 0.23
LDLR-204ENST00000545707 BTBD10Q9BSF8 475 aa16.46■□□□□ 0.23
LDLR-204ENST00000545707 PLAC1Q9HBJ0 212 aa16.46■□□□□ 0.23
LDLR-204ENST00000545707 BATF3Q9NR55 127 aa16.46■□□□□ 0.23
LDLR-204ENST00000545707 SMYD2Q9NRG4 433 aa16.46■□□□□ 0.23
LDLR-204ENST00000545707 WDR35Q9P2L0 1181 aa16.46■□□□□ 0.23
LDLR-204ENST00000545707 GSC2O15499 205 aa16.45■□□□□ 0.22
LDLR-204ENST00000545707 TOP3BO95985 862 aaKnown RBP16.45■□□□□ 0.22
LDLR-204ENST00000545707 APRTP07741 180 aa16.45■□□□□ 0.22
LDLR-204ENST00000545707 STAG3L1P0CL83 205 aa16.45■□□□□ 0.22
LDLR-204ENST00000545707 GPD1P21695 349 aa16.45■□□□□ 0.22
LDLR-204ENST00000545707 IL4RP24394 825 aa16.45■□□□□ 0.22
LDLR-204ENST00000545707 EDNRBP24530 442 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms