RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 DBX2Q6ZNG2 339 aa15.72■□□□□ 0.11
RTN3-214ENST00000545432 TRMT11Q7Z4G4 463 aaKnown RBP15.72■□□□□ 0.11
RTN3-214ENST00000545432 OR2I1PQ8NGU4 316 aa15.72■□□□□ 0.11
RTN3-214ENST00000545432 CAMK1GQ96NX5 476 aa15.72■□□□□ 0.11
RTN3-214ENST00000545432 SYT15Q9BQS2 421 aa15.72■□□□□ 0.11
RTN3-214ENST00000545432 FAM213AQ9BRX8 229 aa15.72■□□□□ 0.11
RTN3-214ENST00000545432 CALCOCO1Q9P1Z2 691 aa15.72■□□□□ 0.11
RTN3-214ENST00000545432 NFE2L3Q9Y4A8 694 aa15.72■□□□□ 0.11
RTN3-214ENST00000545432 MYOFQ9NZM1 2061 aa15.71■□□□□ 0.11
RTN3-214ENST00000545432 TRIM66O15016 1216 aa15.71■□□□□ 0.11
RTN3-214ENST00000545432 WARSP23381 471 aaKnown RBP15.71■□□□□ 0.11
RTN3-214ENST00000545432 UBA7P41226 1012 aa15.71■□□□□ 0.11
RTN3-214ENST00000545432 KCNA1Q09470 495 aa15.71■□□□□ 0.11
RTN3-214ENST00000545432 PREPLQ4J6C6 727 aaPredicted RBP15.71■□□□□ 0.11
RTN3-214ENST00000545432 TOGARAM2Q6ZUX3 1019 aa15.71■□□□□ 0.11
RTN3-214ENST00000545432 METTL3Q86U44 580 aaKnown RBP15.71■□□□□ 0.11
RTN3-214ENST00000545432 SLCO6A1Q86UG4 719 aa15.71■□□□□ 0.11
RTN3-214ENST00000545432 MIB1Q86YT6 1006 aa15.71■□□□□ 0.11
RTN3-214ENST00000545432 PGBD3Q8N328 593 aa15.71■□□□□ 0.11
RTN3-214ENST00000545432 MYCBPAPQ8TBZ2 947 aa15.71■□□□□ 0.11
RTN3-214ENST00000545432 LARP4BQ92615 738 aaKnown RBP15.71■□□□□ 0.11
RTN3-214ENST00000545432 MYLPFQ96A32 169 aa15.71■□□□□ 0.11
RTN3-214ENST00000545432 PCED1BQ96HM7 432 aa15.71■□□□□ 0.11
RTN3-214ENST00000545432 ZDHHC5Q9C0B5 715 aa15.71■□□□□ 0.11
RTN3-214ENST00000545432 FAM124BQ9H5Z6 455 aaPredicted RBP15.71■□□□□ 0.11
RTN3-214ENST00000545432 ZDHHC4Q9NPG8 344 aa15.71■□□□□ 0.11
RTN3-214ENST00000545432 IL37Q9NZH6 218 aa15.71■□□□□ 0.11
RTN3-214ENST00000545432 CFAP97Q9P2B7 532 aa15.71■□□□□ 0.11
RTN3-214ENST00000545432 SEL1LQ9UBV2 794 aa15.71■□□□□ 0.11
RTN3-214ENST00000545432 GCN1Q92616 2671 aaKnown RBP15.71■□□□□ 0.11
RTN3-214ENST00000545432 SETXQ7Z333 2677 aaKnown RBP15.7■□□□□ 0.1
RTN3-214ENST00000545432 TBC1D3BA6NDS4 549 aa15.7■□□□□ 0.1
RTN3-214ENST00000545432 TBCAO75347 108 aaKnown RBP15.7■□□□□ 0.1
RTN3-214ENST00000545432 TULP3O75386 442 aa15.7■□□□□ 0.1
RTN3-214ENST00000545432 NTSR1P30989 418 aa15.7■□□□□ 0.1
RTN3-214ENST00000545432 GRIK1P39086 918 aa15.7■□□□□ 0.1
RTN3-214ENST00000545432 DHX8Q14562 1220 aaKnown RBP15.7■□□□□ 0.1
RTN3-214ENST00000545432 L1TD1Q5T7N2 865 aaKnown RBP15.7■□□□□ 0.1
RTN3-214ENST00000545432 TMPRSS7Q7RTY8 843 aa15.7■□□□□ 0.1
RTN3-214ENST00000545432 NAXDQ8IW45 347 aa15.7■□□□□ 0.1
RTN3-214ENST00000545432 ZNF513Q8N8E2 541 aaPredicted RBP15.7■□□□□ 0.1
RTN3-214ENST00000545432 TERB1Q8NA31 727 aa15.7■□□□□ 0.1
RTN3-214ENST00000545432 DNASE2BQ8WZ79 361 aa15.7■□□□□ 0.1
RTN3-214ENST00000545432 OVCA2Q8WZ82 227 aa15.7■□□□□ 0.1
RTN3-214ENST00000545432 TMEM30AQ9NV96 361 aa15.7■□□□□ 0.1
RTN3-214ENST00000545432 SUSD2Q9UGT4 822 aa15.7■□□□□ 0.1
RTN3-214ENST00000545432 PCOLCE2Q9UKZ9 415 aa15.7■□□□□ 0.1
RTN3-214ENST00000545432 CIZ1Q9ULV3 898 aaPredicted RBP15.7■□□□□ 0.1
RTN3-214ENST00000545432 ADAMTS9Q9P2N4 1935 aa15.7■□□□□ 0.1
RTN3-214ENST00000545432 EIF5BO60841 1220 aaKnown RBP15.69■□□□□ 0.1
RTN3-214ENST00000545432 ZNF883P0CG24 379 aa15.69■□□□□ 0.1
RTN3-214ENST00000545432 LONP1P36776 959 aaKnown RBP15.69■□□□□ 0.1
RTN3-214ENST00000545432 TAF10Q12962 218 aa15.69■□□□□ 0.1
RTN3-214ENST00000545432 SFR1Q86XK3 245 aa15.69■□□□□ 0.1
RTN3-214ENST00000545432 DEFB119Q8N690 84 aa15.69■□□□□ 0.1
RTN3-214ENST00000545432 PNPLA1Q8N8W4 532 aa15.69■□□□□ 0.1
RTN3-214ENST00000545432 TRIML1Q8N9V2 468 aa15.69■□□□□ 0.1
RTN3-214ENST00000545432 BAHD1Q8TBE0 780 aaPredicted RBP15.69■□□□□ 0.1
RTN3-214ENST00000545432 DNAJC19Q96DA6 116 aa15.69■□□□□ 0.1
RTN3-214ENST00000545432 FAM84AQ96KN4 292 aa15.69■□□□□ 0.1
RTN3-214ENST00000545432 ACCSQ96QU6 501 aa15.69■□□□□ 0.1
RTN3-214ENST00000545432 GABRG3Q99928 467 aa15.69■□□□□ 0.1
RTN3-214ENST00000545432 ZHX3Q9H4I2 956 aa15.69■□□□□ 0.1
RTN3-214ENST00000545432 PDE11AQ9HCR9 933 aa15.69■□□□□ 0.1
RTN3-214ENST00000545432 INTS13Q9NVM9 706 aa15.69■□□□□ 0.1
RTN3-214ENST00000545432 SMPD4Q9NXE4 827 aa15.69■□□□□ 0.1
RTN3-214ENST00000545432 RBAKQ9NYW8 714 aaPredicted RBP15.69■□□□□ 0.1
RTN3-214ENST00000545432 DEC1Q9P2X7 70 aa15.69■□□□□ 0.1
RTN3-214ENST00000545432 EXOC7Q9UPT5 735 aa15.69■□□□□ 0.1
RTN3-214ENST00000545432 APOBEC2Q9Y235 224 aaKnown RBP15.69■□□□□ 0.1
RTN3-214ENST00000545432 NME7Q9Y5B8 376 aa15.69■□□□□ 0.1
RTN3-214ENST00000545432 FAM92AA1XBS5 289 aa15.68■□□□□ 0.1
RTN3-214ENST00000545432 F8VP50 259 aa15.68■□□□□ 0.1
RTN3-214ENST00000545432 GREM1O60565 184 aa15.68■□□□□ 0.1
RTN3-214ENST00000545432 TACC1O75410 805 aa15.68■□□□□ 0.1
RTN3-214ENST00000545432 KRT18P05783 430 aaKnown RBP15.68■□□□□ 0.1
RTN3-214ENST00000545432 HOXB2P14652 356 aa15.68■□□□□ 0.1
RTN3-214ENST00000545432 NDUFV2P19404 249 aa15.68■□□□□ 0.1
RTN3-214ENST00000545432 ANXA13P27216 316 aa15.68■□□□□ 0.1
RTN3-214ENST00000545432 PSMC1P62191 440 aaKnown RBP15.68■□□□□ 0.1
RTN3-214ENST00000545432 KDSRQ06136 332 aa15.68■□□□□ 0.1
RTN3-214ENST00000545432 MYO1EQ12965 1108 aa15.68■□□□□ 0.1
RTN3-214ENST00000545432 TDRD10Q5VZ19 366 aaKnown RBP15.68■□□□□ 0.1
RTN3-214ENST00000545432 NUDT18Q6ZVK8 323 aa15.68■□□□□ 0.1
RTN3-214ENST00000545432 KRI1Q8N9T8 703 aaKnown RBP15.68■□□□□ 0.1
RTN3-214ENST00000545432 IPO4Q8TEX9 1081 aaKnown RBP15.68■□□□□ 0.1
RTN3-214ENST00000545432 FOXJ1Q92949 421 aa15.68■□□□□ 0.1
RTN3-214ENST00000545432 SAAL1Q96ER3 474 aa15.68■□□□□ 0.1
RTN3-214ENST00000545432 HPDLQ96IR7 371 aa15.68■□□□□ 0.1
RTN3-214ENST00000545432 KIF2CQ99661 725 aa15.68■□□□□ 0.1
RTN3-214ENST00000545432 MTMR12Q9C0I1 747 aa15.68■□□□□ 0.1
RTN3-214ENST00000545432 SPHK2Q9NRA0 654 aa15.68■□□□□ 0.1
RTN3-214ENST00000545432 OLFML3Q9NRN5 406 aa15.68■□□□□ 0.1
RTN3-214ENST00000545432 TOR4AQ9NXH8 423 aa15.68■□□□□ 0.1
RTN3-214ENST00000545432 PCDHB9Q9Y5E1 797 aa15.68■□□□□ 0.1
RTN3-214ENST00000545432 CEP192Q8TEP8 1941 aa15.67■□□□□ 0.1
RTN3-214ENST00000545432 A0A087WV48 116 aa15.67■□□□□ 0.1
RTN3-214ENST00000545432 GFRA2O00451 464 aa15.67■□□□□ 0.1
RTN3-214ENST00000545432 COCHO43405 550 aa15.67■□□□□ 0.1
RTN3-214ENST00000545432 SEC24BO95487 1268 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms