RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 MMEP08473 750 aa12.37□□□□□ -0.43
SNHG1-221ENST00000544983 GZMAP12544 262 aa12.37□□□□□ -0.43
SNHG1-221ENST00000544983 MYL4P12829 197 aa12.37□□□□□ -0.43
SNHG1-221ENST00000544983 TNFAIP3P21580 790 aa12.37□□□□□ -0.43
SNHG1-221ENST00000544983 GABRR2P28476 465 aa12.37□□□□□ -0.43
SNHG1-221ENST00000544983 WEE1P30291 646 aa12.37□□□□□ -0.43
SNHG1-221ENST00000544983 TUBP50607 506 aa12.37□□□□□ -0.43
SNHG1-221ENST00000544983 TKTL1P51854 596 aa12.37□□□□□ -0.43
SNHG1-221ENST00000544983 FMO1Q01740 532 aa12.37□□□□□ -0.43
SNHG1-221ENST00000544983 TAF10Q12962 218 aa12.37□□□□□ -0.43
SNHG1-221ENST00000544983 PDCLQ13371 301 aa12.37□□□□□ -0.43
SNHG1-221ENST00000544983 MTMR3Q13615 1198 aa12.37□□□□□ -0.43
SNHG1-221ENST00000544983 PRSS36Q5K4E3 855 aa12.37□□□□□ -0.43
SNHG1-221ENST00000544983 DENND1BQ6P3S1 775 aa12.37□□□□□ -0.43
SNHG1-221ENST00000544983 GAREM2Q75VX8 874 aa12.37□□□□□ -0.43
SNHG1-221ENST00000544983 TADA2BQ86TJ2 420 aa12.37□□□□□ -0.43
SNHG1-221ENST00000544983 PLCD3Q8N3E9 789 aa12.37□□□□□ -0.43
SNHG1-221ENST00000544983 C1orf131Q8NDD1 294 aaKnown RBP12.37□□□□□ -0.43
SNHG1-221ENST00000544983 SCAMP5Q8TAC9 235 aa12.37□□□□□ -0.43
SNHG1-221ENST00000544983 IPO4Q8TEX9 1081 aaKnown RBP12.37□□□□□ -0.43
SNHG1-221ENST00000544983 PPP1R13BQ96KQ4 1090 aa12.37□□□□□ -0.43
SNHG1-221ENST00000544983 PANX2Q96RD6 677 aa12.37□□□□□ -0.43
SNHG1-221ENST00000544983 SYT11Q9BT88 431 aa12.37□□□□□ -0.43
SNHG1-221ENST00000544983 APOL5Q9BWW9 433 aa12.37□□□□□ -0.43
SNHG1-221ENST00000544983 POMKQ9H5K3 350 aa12.37□□□□□ -0.43
SNHG1-221ENST00000544983 HAUS4Q9H6D7 363 aa12.37□□□□□ -0.43
SNHG1-221ENST00000544983 IL21Q9HBE4 155 aa12.37□□□□□ -0.43
SNHG1-221ENST00000544983 ABHD10Q9NUJ1 306 aa12.37□□□□□ -0.43
SNHG1-221ENST00000544983 HCFC1R1Q9NWW0 138 aa12.37□□□□□ -0.43
SNHG1-221ENST00000544983 PATJQ8NI35 1801 aa12.37□□□□□ -0.43
SNHG1-221ENST00000544983 C2orf16Q68DN1 1984 aa12.36□□□□□ -0.43
SNHG1-221ENST00000544983 SSU72P8A0A1W2PR75 194 aa12.36□□□□□ -0.43
SNHG1-221ENST00000544983 CALCAP01258 141 aa12.36□□□□□ -0.43
SNHG1-221ENST00000544983 GLI1P08151 1106 aa12.36□□□□□ -0.43
SNHG1-221ENST00000544983 ZDHHC11BP0C7U3 371 aa12.36□□□□□ -0.43
SNHG1-221ENST00000544983 CHRNB2P17787 502 aa12.36□□□□□ -0.43
SNHG1-221ENST00000544983 SCNN1AP37088 669 aa12.36□□□□□ -0.43
SNHG1-221ENST00000544983 NSFP46459 744 aaKnown RBP12.36□□□□□ -0.43
SNHG1-221ENST00000544983 GABRB2P47870 512 aa12.36□□□□□ -0.43
SNHG1-221ENST00000544983 GSDMDP57764 484 aa12.36□□□□□ -0.43
SNHG1-221ENST00000544983 USP46P62068 366 aa12.36□□□□□ -0.43
SNHG1-221ENST00000544983 NOMO3P69849 1222 aa12.36□□□□□ -0.43
SNHG1-221ENST00000544983 GSE1Q14687 1217 aa12.36□□□□□ -0.43
SNHG1-221ENST00000544983 TDRD12Q587J7 1177 aaKnown RBP12.36□□□□□ -0.43
SNHG1-221ENST00000544983 TAF3Q5VWG9 929 aa12.36□□□□□ -0.43
SNHG1-221ENST00000544983 HGSNATQ68CP4 663 aa12.36□□□□□ -0.43
SNHG1-221ENST00000544983 BEND5Q7L4P6 421 aa12.36□□□□□ -0.43
SNHG1-221ENST00000544983 ERICH1Q86X53 443 aa12.36□□□□□ -0.43
SNHG1-221ENST00000544983 HS6ST3Q8IZP7 471 aa12.36□□□□□ -0.43
SNHG1-221ENST00000544983 WDTC1Q8N5D0 677 aa12.36□□□□□ -0.43
SNHG1-221ENST00000544983 SHKBP1Q8TBC3 707 aa12.36□□□□□ -0.43
SNHG1-221ENST00000544983 SLC20A1Q8WUM9 679 aa12.36□□□□□ -0.43
SNHG1-221ENST00000544983 GOLGA1Q92805 767 aa12.36□□□□□ -0.43
SNHG1-221ENST00000544983 C18orf8Q96DM3 657 aa12.36□□□□□ -0.43
SNHG1-221ENST00000544983 VCPIP1Q96JH7 1222 aa12.36□□□□□ -0.43
SNHG1-221ENST00000544983 ATXN3LQ9H3M9 355 aa12.36□□□□□ -0.43
SNHG1-221ENST00000544983 TASP1Q9H6P5 420 aa12.36□□□□□ -0.43
SNHG1-221ENST00000544983 SYNCQ9H7C4 482 aa12.36□□□□□ -0.43
SNHG1-221ENST00000544983 ZNF334Q9HCZ1 680 aaPredicted RBP12.36□□□□□ -0.43
SNHG1-221ENST00000544983 ST7Q9NRC1 585 aa12.36□□□□□ -0.43
SNHG1-221ENST00000544983 TMEM51Q9NW97 253 aa12.36□□□□□ -0.43
SNHG1-221ENST00000544983 CLIC5Q9NZA1 410 aa12.36□□□□□ -0.43
SNHG1-221ENST00000544983 CDH7Q9ULB5 785 aa12.36□□□□□ -0.43
SNHG1-221ENST00000544983 STRIP2Q9ULQ0 834 aa12.36□□□□□ -0.43
SNHG1-221ENST00000544983 ZNF638Q14966 1978 aaKnown RBP12.36□□□□□ -0.43
SNHG1-221ENST00000544983 ZNF840PA6NDX5 716 aa12.35□□□□□ -0.43
SNHG1-221ENST00000544983 TULP2O00295 520 aa12.35□□□□□ -0.43
SNHG1-221ENST00000544983 CALB1P05937 261 aa12.35□□□□□ -0.43
SNHG1-221ENST00000544983 CFHP08603 1231 aa12.35□□□□□ -0.43
SNHG1-221ENST00000544983 USP17L7P0C7H9 530 aa12.35□□□□□ -0.43
SNHG1-221ENST00000544983 UNGP13051 313 aaPredicted RBP12.35□□□□□ -0.43
SNHG1-221ENST00000544983 MMP8P22894 467 aa12.35□□□□□ -0.43
SNHG1-221ENST00000544983 CENPCQ03188 943 aa12.35□□□□□ -0.43
SNHG1-221ENST00000544983 TFF2Q03403 129 aa12.35□□□□□ -0.43
SNHG1-221ENST00000544983 C1QBPQ07021 282 aaKnown RBP12.35□□□□□ -0.43
SNHG1-221ENST00000544983 ADIGQ0VDE8 80 aa12.35□□□□□ -0.43
SNHG1-221ENST00000544983 MAPK8IP2Q13387 824 aaPredicted RBP12.35□□□□□ -0.43
SNHG1-221ENST00000544983 CLEC16AQ2KHT3 1053 aa12.35□□□□□ -0.43
SNHG1-221ENST00000544983 EFHC1Q5JVL4 640 aa12.35□□□□□ -0.43
SNHG1-221ENST00000544983 E4F1Q66K89 784 aaPredicted RBP12.35□□□□□ -0.43
SNHG1-221ENST00000544983 KLHDC10Q6PID8 442 aa12.35□□□□□ -0.43
SNHG1-221ENST00000544983 TOGARAM2Q6ZUX3 1019 aa12.35□□□□□ -0.43
SNHG1-221ENST00000544983 GPRIN1Q7Z2K8 1008 aa12.35□□□□□ -0.43
SNHG1-221ENST00000544983 ZNF571Q7Z3V5 609 aaPredicted RBP12.35□□□□□ -0.43
SNHG1-221ENST00000544983 TMEM150AQ86TG1 271 aa12.35□□□□□ -0.43
SNHG1-221ENST00000544983 PASD1Q8IV76 773 aa12.35□□□□□ -0.43
SNHG1-221ENST00000544983 FGF13Q92913 245 aa12.35□□□□□ -0.43
SNHG1-221ENST00000544983 NXPE3Q969Y0 559 aa12.35□□□□□ -0.43
SNHG1-221ENST00000544983 E2F7Q96AV8 911 aa12.35□□□□□ -0.43
SNHG1-221ENST00000544983 ASB2Q96Q27 587 aa12.35□□□□□ -0.43
SNHG1-221ENST00000544983 OLA1Q9NTK5 396 aaKnown RBP12.35□□□□□ -0.43
SNHG1-221ENST00000544983 SEPT11Q9NVA2 429 aaKnown RBP12.35□□□□□ -0.43
SNHG1-221ENST00000544983 ASNSD1Q9NWL6 643 aa12.35□□□□□ -0.43
SNHG1-221ENST00000544983 WDR35Q9P2L0 1181 aa12.35□□□□□ -0.43
SNHG1-221ENST00000544983 EPS15L1Q9UBC2 864 aa12.35□□□□□ -0.43
SNHG1-221ENST00000544983 DOCK6Q96HP0 2047 aa12.35□□□□□ -0.43
SNHG1-221ENST00000544983 NOTCH4Q99466 2003 aa12.35□□□□□ -0.43
SNHG1-221ENST00000544983 EYSQ5T1H1 3165 aa12.34□□□□□ -0.43
SNHG1-221ENST00000544983 A0A1W2PRU2 124 aa12.34□□□□□ -0.43
SNHG1-221ENST00000544983 E5RJQ4 531 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms