RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 RAB3IL1Q8TBN0 382 aa12.99□□□□□ -0.33
PAAF1-215ENST00000544909 MTBPQ96DY7 904 aa12.99□□□□□ -0.33
PAAF1-215ENST00000544909 RMDN2Q96LZ7 410 aa12.99□□□□□ -0.33
PAAF1-215ENST00000544909 HEXIM2Q96MH2 286 aaKnown RBP12.99□□□□□ -0.33
PAAF1-215ENST00000544909 TXNRD2Q9NNW7 524 aa12.99□□□□□ -0.33
PAAF1-215ENST00000544909 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.99□□□□□ -0.33
PAAF1-215ENST00000544909 DPP3Q9NY33 737 aa12.99□□□□□ -0.33
PAAF1-215ENST00000544909 RCOR3Q9P2K3 495 aaPredicted RBP12.99□□□□□ -0.33
PAAF1-215ENST00000544909 TSPAN16Q9UKR8 245 aa12.99□□□□□ -0.33
PAAF1-215ENST00000544909 POLR2AP24928 1970 aaKnown RBP12.99□□□□□ -0.33
PAAF1-215ENST00000544909 E7ENQ6 273 aa12.99□□□□□ -0.33
PAAF1-215ENST00000544909 IGF2BP3O00425 579 aaKnown RBP eCLIP12.99□□□□□ -0.33
PAAF1-215ENST00000544909 PGK2P07205 417 aa12.99□□□□□ -0.33
PAAF1-215ENST00000544909 SDC4P31431 198 aa12.99□□□□□ -0.33
PAAF1-215ENST00000544909 RAP1GAPP47736 663 aa12.99□□□□□ -0.33
PAAF1-215ENST00000544909 RPL34P49207 117 aaKnown RBP12.99□□□□□ -0.33
PAAF1-215ENST00000544909 NDST1P52848 882 aa12.99□□□□□ -0.33
PAAF1-215ENST00000544909 CDH8P55286 799 aa12.99□□□□□ -0.33
PAAF1-215ENST00000544909 ZNF200P98182 395 aaPredicted RBP12.99□□□□□ -0.33
PAAF1-215ENST00000544909 CDK16Q00536 496 aa12.99□□□□□ -0.33
PAAF1-215ENST00000544909 PPARDQ03181 441 aa12.99□□□□□ -0.33
PAAF1-215ENST00000544909 MGAT5Q09328 741 aa12.99□□□□□ -0.33
PAAF1-215ENST00000544909 DNAJC3Q13217 504 aa12.99□□□□□ -0.33
PAAF1-215ENST00000544909 FNBP1LQ5T0N5 605 aa12.99□□□□□ -0.33
PAAF1-215ENST00000544909 ANKRD22Q5VYY1 191 aa12.99□□□□□ -0.33
PAAF1-215ENST00000544909 FAM91A1Q658Y4 838 aa12.99□□□□□ -0.33
PAAF1-215ENST00000544909 OLFML1Q6UWY5 402 aa12.99□□□□□ -0.33
PAAF1-215ENST00000544909 TBC1D1Q86TI0 1168 aaPredicted RBP12.99□□□□□ -0.33
PAAF1-215ENST00000544909 CDKL3Q8IVW4 592 aaPredicted RBP12.99□□□□□ -0.33
PAAF1-215ENST00000544909 UNC45BQ8IWX7 931 aa12.99□□□□□ -0.33
PAAF1-215ENST00000544909 HACE1Q8IYU2 909 aa12.99□□□□□ -0.33
PAAF1-215ENST00000544909 EMC1Q8N766 993 aa12.99□□□□□ -0.33
PAAF1-215ENST00000544909 FAM71DQ8N9W8 422 aa12.99□□□□□ -0.33
PAAF1-215ENST00000544909 C10orf82Q8WW14 230 aa12.99□□□□□ -0.33
PAAF1-215ENST00000544909 RXFP2Q8WXD0 754 aa12.99□□□□□ -0.33
PAAF1-215ENST00000544909 ZNF75CPQ92670 426 aaPredicted RBP12.99□□□□□ -0.33
PAAF1-215ENST00000544909 APOPT1Q96IL0 206 aa12.99□□□□□ -0.33
PAAF1-215ENST00000544909 RNPEPQ9H4A4 650 aa12.99□□□□□ -0.33
PAAF1-215ENST00000544909 ELP3Q9H9T3 547 aa12.99□□□□□ -0.33
PAAF1-215ENST00000544909 PPP1R1BQ9UD71 204 aaPredicted RBP12.99□□□□□ -0.33
PAAF1-215ENST00000544909 LNPEPQ9UIQ6 1025 aa12.99□□□□□ -0.33
PAAF1-215ENST00000544909 A0A087WZ62 844 aa12.98□□□□□ -0.33
PAAF1-215ENST00000544909 APOL1O14791 398 aa12.98□□□□□ -0.33
PAAF1-215ENST00000544909 PPP1R12AO14974 1030 aaPredicted RBP12.98□□□□□ -0.33
PAAF1-215ENST00000544909 TSPAN1O60635 241 aa12.98□□□□□ -0.33
PAAF1-215ENST00000544909 KRT37O76014 449 aa12.98□□□□□ -0.33
PAAF1-215ENST00000544909 INHBAP08476 426 aa12.98□□□□□ -0.33
PAAF1-215ENST00000544909 TPSB2P20231 275 aa12.98□□□□□ -0.33
PAAF1-215ENST00000544909 PRKCHP24723 683 aa12.98□□□□□ -0.33
PAAF1-215ENST00000544909 CCNG1P51959 295 aa12.98□□□□□ -0.33
PAAF1-215ENST00000544909 OSTNP61366 133 aa12.98□□□□□ -0.33
PAAF1-215ENST00000544909 DYNLT1P63172 113 aa12.98□□□□□ -0.33
PAAF1-215ENST00000544909 BASP1P80723 227 aaKnown RBP12.98□□□□□ -0.33
PAAF1-215ENST00000544909 ATP11AP98196 1134 aa12.98□□□□□ -0.33
PAAF1-215ENST00000544909 SLC6A3Q01959 620 aa12.98□□□□□ -0.33
PAAF1-215ENST00000544909 TPSAB1Q15661 275 aa12.98□□□□□ -0.33
PAAF1-215ENST00000544909 DPYSL2Q16555 572 aa12.98□□□□□ -0.33
PAAF1-215ENST00000544909 ZNF792Q3KQV3 632 aa12.98□□□□□ -0.33
PAAF1-215ENST00000544909 DARS2Q6PI48 645 aaKnown RBP12.98□□□□□ -0.33
PAAF1-215ENST00000544909 LVRNQ6Q4G3 990 aa12.98□□□□□ -0.33
PAAF1-215ENST00000544909 MAMDC4Q6UXC1 1216 aa12.98□□□□□ -0.33
PAAF1-215ENST00000544909 BZW1Q7L1Q6 419 aaKnown RBP12.98□□□□□ -0.33
PAAF1-215ENST00000544909 SLC26A9Q7LBE3 791 aa12.98□□□□□ -0.33
PAAF1-215ENST00000544909 PNMA8AQ86V59 439 aaPredicted RBP12.98□□□□□ -0.33
PAAF1-215ENST00000544909 SLC26A11Q86WA9 606 aa12.98□□□□□ -0.33
PAAF1-215ENST00000544909 TMEM192Q8IY95 271 aa12.98□□□□□ -0.33
PAAF1-215ENST00000544909 PLD5Q8N7P1 536 aa12.98□□□□□ -0.33
PAAF1-215ENST00000544909 ACSF2Q96CM8 615 aaPredicted RBP12.98□□□□□ -0.33
PAAF1-215ENST00000544909 FDXACB1Q9BRP7 624 aaPredicted RBP12.98□□□□□ -0.33
PAAF1-215ENST00000544909 WDR83Q9BRX9 315 aaKnown RBP12.98□□□□□ -0.33
PAAF1-215ENST00000544909 USP29Q9HBJ7 922 aa12.98□□□□□ -0.33
PAAF1-215ENST00000544909 MLXIPLQ9NP71 852 aa12.98□□□□□ -0.33
PAAF1-215ENST00000544909 HESX1Q9UBX0 185 aa12.98□□□□□ -0.33
PAAF1-215ENST00000544909 TJP2Q9UDY2 1190 aa12.98□□□□□ -0.33
PAAF1-215ENST00000544909 HMGXB4Q9UGU5 601 aa12.98□□□□□ -0.33
PAAF1-215ENST00000544909 AKT3Q9Y243 479 aa12.98□□□□□ -0.33
PAAF1-215ENST00000544909 MGAMO43451 1857 aa12.98□□□□□ -0.33
PAAF1-215ENST00000544909 CITO14578 2027 aa12.98□□□□□ -0.33
PAAF1-215ENST00000544909 SBF1O95248 1867 aa12.97□□□□□ -0.33
PAAF1-215ENST00000544909 TCRBV9S1A1TA0A576 114 aa12.97□□□□□ -0.33
PAAF1-215ENST00000544909 RRN3P2A6NIE6 340 aa12.97□□□□□ -0.33
PAAF1-215ENST00000544909 E5RJQ4 531 aa12.97□□□□□ -0.33
PAAF1-215ENST00000544909 DNAJC6O75061 913 aa12.97□□□□□ -0.33
PAAF1-215ENST00000544909 SPAG7O75391 227 aa12.97□□□□□ -0.33
PAAF1-215ENST00000544909 MT-ND3P03897 115 aa12.97□□□□□ -0.33
PAAF1-215ENST00000544909 CD48P09326 243 aa12.97□□□□□ -0.33
PAAF1-215ENST00000544909 FAM163BP0C2L3 166 aa12.97□□□□□ -0.33
PAAF1-215ENST00000544909 CNTFP26441 200 aa12.97□□□□□ -0.33
PAAF1-215ENST00000544909 SSTR1P30872 391 aa12.97□□□□□ -0.33
PAAF1-215ENST00000544909 MAP2K2P36507 400 aa12.97□□□□□ -0.33
PAAF1-215ENST00000544909 MAGEA3P43357 314 aa12.97□□□□□ -0.33
PAAF1-215ENST00000544909 ACADSBP45954 432 aa12.97□□□□□ -0.33
PAAF1-215ENST00000544909 SNAPC2Q13487 334 aa12.97□□□□□ -0.33
PAAF1-215ENST00000544909 PRKG1Q13976 671 aa12.97□□□□□ -0.33
PAAF1-215ENST00000544909 KRT81Q14533 505 aa12.97□□□□□ -0.33
PAAF1-215ENST00000544909 SLC1A5Q15758 541 aa12.97□□□□□ -0.33
PAAF1-215ENST00000544909 BBS9Q3SYG4 887 aa12.97□□□□□ -0.33
PAAF1-215ENST00000544909 MSS51Q4VC12 460 aa12.97□□□□□ -0.33
PAAF1-215ENST00000544909 CHADLQ6NUI6 762 aa12.97□□□□□ -0.33
PAAF1-215ENST00000544909 TAPT1Q6NXT6 567 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms