RNA–Protein interactions for RNA: ENST00000544907.6

TNFAIP1-202, Transcript of TNF alpha induced protein 1, humanhuman

TSL 2 BASIC

Gene TNFAIP1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-202ENST00000544907 UBA3Q8TBC4 463 aa18.85■□□□□ 0.61
TNFAIP1-202ENST00000544907 HAUS1Q96CS2 278 aa18.85■□□□□ 0.61
TNFAIP1-202ENST00000544907 RNF157Q96PX1 679 aa18.85■□□□□ 0.61
TNFAIP1-202ENST00000544907 GDAP2Q9NXN4 497 aa18.85■□□□□ 0.61
TNFAIP1-202ENST00000544907 PSMC3IPQ9P2W1 217 aaPredicted RBP18.85■□□□□ 0.61
TNFAIP1-202ENST00000544907 PCSK1NQ9UHG2 260 aa18.85■□□□□ 0.61
TNFAIP1-202ENST00000544907 RBP3P10745 1247 aa18.85■□□□□ 0.61
TNFAIP1-202ENST00000544907 PTPN9P43378 593 aa18.85■□□□□ 0.61
TNFAIP1-202ENST00000544907 IL9RQ01113 521 aa18.85■□□□□ 0.61
TNFAIP1-202ENST00000544907 ROR1Q01973 937 aa18.85■□□□□ 0.61
TNFAIP1-202ENST00000544907 SP3Q02447 781 aa18.85■□□□□ 0.61
TNFAIP1-202ENST00000544907 DPYSL3Q14195 570 aa18.85■□□□□ 0.61
TNFAIP1-202ENST00000544907 LIMS2Q7Z4I7 341 aa18.85■□□□□ 0.61
TNFAIP1-202ENST00000544907 PDIK1LQ8N165 341 aa18.85■□□□□ 0.61
TNFAIP1-202ENST00000544907 CRYBG2Q8N1P7 616 aa18.85■□□□□ 0.61
TNFAIP1-202ENST00000544907 GBP7Q8N8V2 638 aaPredicted RBP18.85■□□□□ 0.61
TNFAIP1-202ENST00000544907 SPATA18Q8TC71 538 aa18.85■□□□□ 0.61
TNFAIP1-202ENST00000544907 FAF2Q96CS3 445 aa18.85■□□□□ 0.61
TNFAIP1-202ENST00000544907 PEBP4Q96S96 227 aa18.85■□□□□ 0.61
TNFAIP1-202ENST00000544907 PPP1R16BQ96T49 567 aa18.85■□□□□ 0.61
TNFAIP1-202ENST00000544907 ZNF670Q9BS34 389 aa18.85■□□□□ 0.61
TNFAIP1-202ENST00000544907 DHRS4Q9BTZ2 278 aa18.85■□□□□ 0.61
TNFAIP1-202ENST00000544907 KCNK9Q9NPC2 374 aa18.85■□□□□ 0.61
TNFAIP1-202ENST00000544907 GNEQ9Y223 722 aaKnown RBP18.85■□□□□ 0.61
TNFAIP1-202ENST00000544907 CAPN7Q9Y6W3 813 aa18.85■□□□□ 0.61
TNFAIP1-202ENST00000544907 CHADO15335 359 aa18.84■□□□□ 0.61
TNFAIP1-202ENST00000544907 CD48P09326 243 aa18.84■□□□□ 0.61
TNFAIP1-202ENST00000544907 KCNE1P15382 129 aa18.84■□□□□ 0.61
TNFAIP1-202ENST00000544907 ATP2A2P16615 1042 aaKnown RBP18.84■□□□□ 0.61
TNFAIP1-202ENST00000544907 SDC4P31431 198 aa18.84■□□□□ 0.61
TNFAIP1-202ENST00000544907 CDH6P55285 790 aa18.84■□□□□ 0.61
TNFAIP1-202ENST00000544907 GEMIN4P57678 1058 aaKnown RBP18.84■□□□□ 0.61
TNFAIP1-202ENST00000544907 DYNLT1P63172 113 aa18.84■□□□□ 0.61
TNFAIP1-202ENST00000544907 ADAM17P78536 824 aa18.84■□□□□ 0.61
TNFAIP1-202ENST00000544907 KIZQ2M2Z5 673 aa18.84■□□□□ 0.61
TNFAIP1-202ENST00000544907 CCDC14Q49A88 953 aa18.84■□□□□ 0.61
TNFAIP1-202ENST00000544907 PPP1R26Q5T8A7 1209 aaPredicted RBP18.84■□□□□ 0.61
TNFAIP1-202ENST00000544907 C9orf57Q5W0N0 161 aa18.84■□□□□ 0.61
TNFAIP1-202ENST00000544907 SRRM1Q8IYB3 904 aaKnown RBP18.84■□□□□ 0.61
TNFAIP1-202ENST00000544907 PYROXD1Q8WU10 500 aa18.84■□□□□ 0.61
TNFAIP1-202ENST00000544907 HSPH1Q92598 858 aa18.84■□□□□ 0.61
TNFAIP1-202ENST00000544907 ZNF560Q96MR9 790 aa18.84■□□□□ 0.61
TNFAIP1-202ENST00000544907 CALN1Q9BXU9 219 aa18.84■□□□□ 0.61
TNFAIP1-202ENST00000544907 ACSS3Q9H6R3 686 aa18.84■□□□□ 0.61
TNFAIP1-202ENST00000544907 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.84■□□□□ 0.61
TNFAIP1-202ENST00000544907 SETD4Q9NVD3 440 aa18.84■□□□□ 0.61
TNFAIP1-202ENST00000544907 SNTG2Q9NY99 539 aa18.84■□□□□ 0.61
TNFAIP1-202ENST00000544907 GTF2IRD1Q9UHL9 959 aa18.84■□□□□ 0.61
TNFAIP1-202ENST00000544907 Q9Y3F1 56 aa18.84■□□□□ 0.61
TNFAIP1-202ENST00000544907 USP15Q9Y4E8 981 aaPredicted RBP18.84■□□□□ 0.61
TNFAIP1-202ENST00000544907 SNX9Q9Y5X1 595 aa18.84■□□□□ 0.61
TNFAIP1-202ENST00000544907 PIRO00625 290 aa18.83■□□□□ 0.61
TNFAIP1-202ENST00000544907 DNAJC8O75937 253 aaPredicted RBP18.83■□□□□ 0.61
TNFAIP1-202ENST00000544907 SUN1O94901 812 aa18.83■□□□□ 0.61
TNFAIP1-202ENST00000544907 SMIM10L2AP0DMW4 78 aa18.83■□□□□ 0.61
TNFAIP1-202ENST00000544907 SMIM10L2BP0DMW5 78 aa18.83■□□□□ 0.61
TNFAIP1-202ENST00000544907 STX2P32856 288 aa18.83■□□□□ 0.61
TNFAIP1-202ENST00000544907 MAGEA6P43360 314 aa18.83■□□□□ 0.61
TNFAIP1-202ENST00000544907 ACADSBP45954 432 aa18.83■□□□□ 0.61
TNFAIP1-202ENST00000544907 IFNAR2P48551 515 aa18.83■□□□□ 0.61
TNFAIP1-202ENST00000544907 GDF10P55107 478 aa18.83■□□□□ 0.61
TNFAIP1-202ENST00000544907 RNASELQ05823 741 aaKnown RBP18.83■□□□□ 0.61
TNFAIP1-202ENST00000544907 MPP2Q14168 576 aa18.83■□□□□ 0.61
TNFAIP1-202ENST00000544907 SLC9A4Q6AI14 798 aa18.83■□□□□ 0.61
TNFAIP1-202ENST00000544907 TRNP1Q6NT89 227 aa18.83■□□□□ 0.61
TNFAIP1-202ENST00000544907 PACS2Q86VP3 889 aa18.83■□□□□ 0.61
TNFAIP1-202ENST00000544907 TTC30AQ86WT1 665 aa18.83■□□□□ 0.61
TNFAIP1-202ENST00000544907 DENND1AQ8TEH3 1009 aa18.83■□□□□ 0.61
TNFAIP1-202ENST00000544907 CENPIQ92674 756 aaPredicted RBP18.83■□□□□ 0.61
TNFAIP1-202ENST00000544907 ZMAT2Q96NC0 199 aaKnown RBP18.83■□□□□ 0.61
TNFAIP1-202ENST00000544907 MRPL45Q9BRJ2 306 aaKnown RBP18.83■□□□□ 0.61
TNFAIP1-202ENST00000544907 VPS37BQ9H9H4 285 aa18.83■□□□□ 0.61
TNFAIP1-202ENST00000544907 PAK5Q9P286 719 aa18.83■□□□□ 0.61
TNFAIP1-202ENST00000544907 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.83■□□□□ 0.61
TNFAIP1-202ENST00000544907 CITO14578 2027 aa18.83■□□□□ 0.6
TNFAIP1-202ENST00000544907 BCLAF3A2AJT9 711 aaKnown RBP18.82■□□□□ 0.6
TNFAIP1-202ENST00000544907 H0YHG0 523 aa18.82■□□□□ 0.6
TNFAIP1-202ENST00000544907 HAS3O00219 553 aa18.82■□□□□ 0.6
TNFAIP1-202ENST00000544907 FKTNO75072 461 aa18.82■□□□□ 0.6
TNFAIP1-202ENST00000544907 CREB1P16220 341 aa18.82■□□□□ 0.6
TNFAIP1-202ENST00000544907 FASTKD3Q14CZ7 662 aaKnown RBP18.82■□□□□ 0.6
TNFAIP1-202ENST00000544907 TMED2Q15363 201 aa18.82■□□□□ 0.6
TNFAIP1-202ENST00000544907 PMF1Q6P1K2 205 aa18.82■□□□□ 0.6
TNFAIP1-202ENST00000544907 SLC26A9Q7LBE3 791 aa18.82■□□□□ 0.6
TNFAIP1-202ENST00000544907 UNC45BQ8IWX7 931 aa18.82■□□□□ 0.6
TNFAIP1-202ENST00000544907 ANKRD52Q8NB46 1076 aa18.82■□□□□ 0.6
TNFAIP1-202ENST00000544907 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.82■□□□□ 0.6
TNFAIP1-202ENST00000544907 ZNF296Q8WUU4 475 aaPredicted RBP18.82■□□□□ 0.6
TNFAIP1-202ENST00000544907 KHSRPQ92945 711 aaKnown RBP eCLIP18.82■□□□□ 0.6
TNFAIP1-202ENST00000544907 ALKBH8Q96BT7 664 aaKnown RBP18.82■□□□□ 0.6
TNFAIP1-202ENST00000544907 HSFY1Q96LI6 401 aa18.82■□□□□ 0.6
TNFAIP1-202ENST00000544907 SMC6Q96SB8 1091 aa18.82■□□□□ 0.6
TNFAIP1-202ENST00000544907 ELAC2Q9BQ52 826 aaKnown RBP18.82■□□□□ 0.6
TNFAIP1-202ENST00000544907 C11orf84Q9BUA3 381 aaPredicted RBP18.82■□□□□ 0.6
TNFAIP1-202ENST00000544907 SAE1Q9UBE0 346 aaPredicted RBP18.82■□□□□ 0.6
TNFAIP1-202ENST00000544907 RABGEF1Q9UJ41 708 aa18.82■□□□□ 0.6
TNFAIP1-202ENST00000544907 CLUHO75153 1309 aa18.82■□□□□ 0.6
TNFAIP1-202ENST00000544907 TCP11X1B4DZS4 312 aa18.82■□□□□ 0.6
TNFAIP1-202ENST00000544907 ASMTLO95671 621 aa18.82■□□□□ 0.6
TNFAIP1-202ENST00000544907 ZFXP17010 805 aaPredicted RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms