RNA–Protein interactions for RNA: ENST00000544872.1

CIT-216, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-216ENST00000544872 RAP1GAPP47736 663 aa10.07□□□□□ -0.8
CIT-216ENST00000544872 COPB1P53618 953 aaKnown RBP10.07□□□□□ -0.8
CIT-216ENST00000544872 PTK2Q05397 1052 aa10.07□□□□□ -0.8
CIT-216ENST00000544872 KRT31Q15323 416 aa10.07□□□□□ -0.8
CIT-216ENST00000544872 SYCP1Q15431 976 aa10.07□□□□□ -0.8
CIT-216ENST00000544872 CDKAL1Q5VV42 579 aa10.07□□□□□ -0.8
CIT-216ENST00000544872 KIAA1211LQ6NV74 962 aa10.07□□□□□ -0.8
CIT-216ENST00000544872 TRIM65Q6PJ69 517 aa10.07□□□□□ -0.8
CIT-216ENST00000544872 TMEM270Q6UE05 265 aa10.07□□□□□ -0.8
CIT-216ENST00000544872 RRAGAQ7L523 313 aa10.07□□□□□ -0.8
CIT-216ENST00000544872 CACNA2D4Q7Z3S7 1137 aa10.07□□□□□ -0.8
CIT-216ENST00000544872 DNAJB7Q7Z6W7 309 aaPredicted RBP10.07□□□□□ -0.8
CIT-216ENST00000544872 PROSER1Q86XN7 944 aa10.07□□□□□ -0.8
CIT-216ENST00000544872 IRF2BP1Q8IU81 584 aa10.07□□□□□ -0.8
CIT-216ENST00000544872 STKLD1Q8NE28 680 aa10.07□□□□□ -0.8
CIT-216ENST00000544872 ZNF397Q8NF99 534 aaPredicted RBP10.07□□□□□ -0.8
CIT-216ENST00000544872 MRPS31Q92665 395 aaKnown RBP10.07□□□□□ -0.8
CIT-216ENST00000544872 TATDN2Q93075 761 aa10.07□□□□□ -0.8
CIT-216ENST00000544872 PSMG2Q969U7 264 aa10.07□□□□□ -0.8
CIT-216ENST00000544872 NXPE3Q969Y0 559 aa10.07□□□□□ -0.8
CIT-216ENST00000544872 MYLPFQ96A32 169 aa10.07□□□□□ -0.8
CIT-216ENST00000544872 PCED1BQ96HM7 432 aa10.07□□□□□ -0.8
CIT-216ENST00000544872 SLITRK1Q96PX8 696 aa10.07□□□□□ -0.8
CIT-216ENST00000544872 SPAG5Q96R06 1193 aa10.07□□□□□ -0.8
CIT-216ENST00000544872 FBXO44Q9H4M3 255 aa10.07□□□□□ -0.8
CIT-216ENST00000544872 APOBEC3GQ9HC16 384 aaKnown RBP10.07□□□□□ -0.8
CIT-216ENST00000544872 DMAP1Q9NPF5 467 aaPredicted RBP10.07□□□□□ -0.8
CIT-216ENST00000544872 COMMD8Q9NX08 183 aa10.07□□□□□ -0.8
CIT-216ENST00000544872 GDE1Q9NZC3 331 aa10.07□□□□□ -0.8
CIT-216ENST00000544872 MAGED2Q9UNF1 606 aaPredicted RBP10.07□□□□□ -0.8
CIT-216ENST00000544872 DOPEY1Q5JWR5 2465 aa10.07□□□□□ -0.8
CIT-216ENST00000544872 LGALS16A8MUM7 142 aa10.06□□□□□ -0.8
CIT-216ENST00000544872 DPYSL4O14531 572 aa10.06□□□□□ -0.8
CIT-216ENST00000544872 GIPC1O14908 333 aa10.06□□□□□ -0.8
CIT-216ENST00000544872 ATP2C2O75185 946 aa10.06□□□□□ -0.8
CIT-216ENST00000544872 AP1G2O75843 785 aa10.06□□□□□ -0.8
CIT-216ENST00000544872 SEC24AO95486 1093 aa10.06□□□□□ -0.8
CIT-216ENST00000544872 RHOP08100 348 aa10.06□□□□□ -0.8
CIT-216ENST00000544872 CYP2F1P24903 491 aa10.06□□□□□ -0.8
CIT-216ENST00000544872 PON1P27169 355 aa10.06□□□□□ -0.8
CIT-216ENST00000544872 KRT9P35527 623 aa10.06□□□□□ -0.8
CIT-216ENST00000544872 NRLP54845 237 aa10.06□□□□□ -0.8
CIT-216ENST00000544872 RAPGEF1Q13905 1077 aa10.06□□□□□ -0.8
CIT-216ENST00000544872 SIM2Q14190 667 aaPredicted RBP10.06□□□□□ -0.8
CIT-216ENST00000544872 SF3A2Q15428 464 aaKnown RBP10.06□□□□□ -0.8
CIT-216ENST00000544872 ARHGAP44Q17R89 818 aa10.06□□□□□ -0.8
CIT-216ENST00000544872 TSR1Q2NL82 804 aaKnown RBP10.06□□□□□ -0.8
CIT-216ENST00000544872 DENND5BQ6ZUT9 1274 aa10.06□□□□□ -0.8
CIT-216ENST00000544872 MTSS1LQ765P7 747 aa10.06□□□□□ -0.8
CIT-216ENST00000544872 TADA2BQ86TJ2 420 aa10.06□□□□□ -0.8
CIT-216ENST00000544872 LRRTM3Q86VH5 581 aa10.06□□□□□ -0.8
CIT-216ENST00000544872 OSTM1Q86WC4 334 aa10.06□□□□□ -0.8
CIT-216ENST00000544872 TMEM130Q8N3G9 435 aa10.06□□□□□ -0.8
CIT-216ENST00000544872 PDZD8Q8NEN9 1154 aa10.06□□□□□ -0.8
CIT-216ENST00000544872 SLC2A14Q8TDB8 520 aa10.06□□□□□ -0.8
CIT-216ENST00000544872 GIPC2Q8TF65 315 aa10.06□□□□□ -0.8
CIT-216ENST00000544872 GOLGA1Q92805 767 aa10.06□□□□□ -0.8
CIT-216ENST00000544872 E2F7Q96AV8 911 aa10.06□□□□□ -0.8
CIT-216ENST00000544872 IQCDQ96DY2 449 aa10.06□□□□□ -0.8
CIT-216ENST00000544872 SPATA17Q96L03 361 aa10.06□□□□□ -0.8
CIT-216ENST00000544872 C8orf48Q96LL4 319 aa10.06□□□□□ -0.8
CIT-216ENST00000544872 NOX5Q96PH1 765 aa10.06□□□□□ -0.8
CIT-216ENST00000544872 TMEM209Q96SK2 561 aa10.06□□□□□ -0.8
CIT-216ENST00000544872 FAM126AQ9BYI3 521 aaPredicted RBP10.06□□□□□ -0.8
CIT-216ENST00000544872 NACA2Q9H009 215 aa10.06□□□□□ -0.8
CIT-216ENST00000544872 ATXN3LQ9H3M9 355 aa10.06□□□□□ -0.8
CIT-216ENST00000544872 CLMPQ9H6B4 373 aa10.06□□□□□ -0.8
CIT-216ENST00000544872 CBX8Q9HC52 389 aa10.06□□□□□ -0.8
CIT-216ENST00000544872 TRPM5Q9NZQ8 1165 aa10.06□□□□□ -0.8
CIT-216ENST00000544872 DNAJC12Q9UKB3 198 aa10.06□□□□□ -0.8
CIT-216ENST00000544872 CLUHO75153 1309 aa10.06□□□□□ -0.8
CIT-216ENST00000544872 ITPR1Q14643 2758 aa10.05□□□□□ -0.8
CIT-216ENST00000544872 MYH11P35749 1972 aa10.05□□□□□ -0.8
CIT-216ENST00000544872 ABCA12Q86UK0 2595 aa10.05□□□□□ -0.8
CIT-216ENST00000544872 SLC9A1P19634 815 aa10.05□□□□□ -0.8
CIT-216ENST00000544872 DDX6P26196 483 aaKnown RBP eCLIP10.05□□□□□ -0.8
CIT-216ENST00000544872 ADORA2BP29275 332 aa10.05□□□□□ -0.8
CIT-216ENST00000544872 UBASH3AP57075 661 aa10.05□□□□□ -0.8
CIT-216ENST00000544872 PLCB2Q00722 1185 aa10.05□□□□□ -0.8
CIT-216ENST00000544872 DDR2Q16832 855 aa10.05□□□□□ -0.8
CIT-216ENST00000544872 GET4Q7L5D6 327 aaPredicted RBP10.05□□□□□ -0.8
CIT-216ENST00000544872 DHX40Q8IX18 779 aaKnown RBP10.05□□□□□ -0.8
CIT-216ENST00000544872 NUP93Q8N1F7 819 aa10.05□□□□□ -0.8
CIT-216ENST00000544872 ARHGAP18Q8N392 663 aa10.05□□□□□ -0.8
CIT-216ENST00000544872 SLC44A3Q8N4M1 653 aa10.05□□□□□ -0.8
CIT-216ENST00000544872 RBBP8NLQ8NC74 664 aaPredicted RBP10.05□□□□□ -0.8
CIT-216ENST00000544872 MSANTD4Q8NCY6 345 aa10.05□□□□□ -0.8
CIT-216ENST00000544872 MED15Q96RN5 788 aa10.05□□□□□ -0.8
CIT-216ENST00000544872 NUP58Q9BVL2 599 aa10.05□□□□□ -0.8
CIT-216ENST00000544872 MIS12Q9H081 205 aa10.05□□□□□ -0.8
CIT-216ENST00000544872 LRRC4Q9HBW1 653 aa10.05□□□□□ -0.8
CIT-216ENST00000544872 PLCB1Q9NQ66 1216 aa10.05□□□□□ -0.8
CIT-216ENST00000544872 CRTAC1Q9NQ79 661 aa10.05□□□□□ -0.8
CIT-216ENST00000544872 AVENQ9NQS1 362 aaPredicted RBP10.05□□□□□ -0.8
CIT-216ENST00000544872 FAM49BQ9NUQ9 324 aa10.05□□□□□ -0.8
CIT-216ENST00000544872 CDH7Q9ULB5 785 aa10.05□□□□□ -0.8
CIT-216ENST00000544872 SRPK3Q9UPE1 567 aa10.05□□□□□ -0.8
CIT-216ENST00000544872 WASF3Q9UPY6 502 aa10.05□□□□□ -0.8
CIT-216ENST00000544872 SPTAN1Q13813 2472 aaKnown RBP10.05□□□□□ -0.8
CIT-216ENST00000544872 PIEZO2Q9H5I5 2752 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms