RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 ZDHHC9Q9Y397 364 aa17.27■□□□□ 0.36
DDX55-212ENST00000544738 KIF26AQ9ULI4 1882 aaPredicted RBP17.27■□□□□ 0.35
DDX55-212ENST00000544738 BPTFQ12830 3046 aa17.26■□□□□ 0.35
DDX55-212ENST00000544738 TRIM66O15016 1216 aa17.26■□□□□ 0.35
DDX55-212ENST00000544738 USP17L7P0C7H9 530 aa17.26■□□□□ 0.35
DDX55-212ENST00000544738 ARSAP15289 507 aa17.26■□□□□ 0.35
DDX55-212ENST00000544738 BDNFP23560 247 aa17.26■□□□□ 0.35
DDX55-212ENST00000544738 ANXA13P27216 316 aa17.26■□□□□ 0.35
DDX55-212ENST00000544738 RDXP35241 583 aaKnown RBP17.26■□□□□ 0.35
DDX55-212ENST00000544738 GRIK1P39086 918 aa17.26■□□□□ 0.35
DDX55-212ENST00000544738 MYL6P60660 151 aa17.26■□□□□ 0.35
DDX55-212ENST00000544738 CLDN10P78369 228 aa17.26■□□□□ 0.35
DDX55-212ENST00000544738 CYP27A1Q02318 531 aa17.26■□□□□ 0.35
DDX55-212ENST00000544738 CCDC142Q17RM4 750 aa17.26■□□□□ 0.35
DDX55-212ENST00000544738 FBXO43Q4G163 708 aa17.26■□□□□ 0.35
DDX55-212ENST00000544738 PROSER1Q86XN7 944 aa17.26■□□□□ 0.35
DDX55-212ENST00000544738 CHCHD4Q8N4Q1 142 aa17.26■□□□□ 0.35
DDX55-212ENST00000544738 STKLD1Q8NE28 680 aa17.26■□□□□ 0.35
DDX55-212ENST00000544738 MYLPFQ96A32 169 aa17.26■□□□□ 0.35
DDX55-212ENST00000544738 PCED1BQ96HM7 432 aa17.26■□□□□ 0.35
DDX55-212ENST00000544738 GZF1Q9H116 711 aaPredicted RBP17.26■□□□□ 0.35
DDX55-212ENST00000544738 KCTD10Q9H3F6 313 aa17.26■□□□□ 0.35
DDX55-212ENST00000544738 CCL26Q9Y258 94 aa17.26■□□□□ 0.35
DDX55-212ENST00000544738 GPSM3Q9Y4H4 160 aa17.26■□□□□ 0.35
DDX55-212ENST00000544738 DENND4CQ5VZ89 1909 aa17.25■□□□□ 0.35
DDX55-212ENST00000544738 HELZ2Q9BYK8 2649 aaKnown RBP17.25■□□□□ 0.35
DDX55-212ENST00000544738 TRAV19A0A0A6YYK7 116 aa17.25■□□□□ 0.35
DDX55-212ENST00000544738 FAM237AA0A1B0GTK4 181 aa17.25■□□□□ 0.35
DDX55-212ENST00000544738 RPN1P04843 607 aaKnown RBP17.25■□□□□ 0.35
DDX55-212ENST00000544738 PTPN1P18031 435 aaKnown RBP17.25■□□□□ 0.35
DDX55-212ENST00000544738 BCKDHBP21953 392 aa17.25■□□□□ 0.35
DDX55-212ENST00000544738 PDE6CP51160 858 aa17.25■□□□□ 0.35
DDX55-212ENST00000544738 FAM160A1Q05DH4 1040 aa17.25■□□□□ 0.35
DDX55-212ENST00000544738 LMAN2Q12907 356 aa17.25■□□□□ 0.35
DDX55-212ENST00000544738 BIRC3Q13489 604 aa17.25■□□□□ 0.35
DDX55-212ENST00000544738 COL28A1Q2UY09 1125 aa17.25■□□□□ 0.35
DDX55-212ENST00000544738 TRIM61Q5EBN2 209 aa17.25■□□□□ 0.35
DDX55-212ENST00000544738 DENND5BQ6ZUT9 1274 aa17.25■□□□□ 0.35
DDX55-212ENST00000544738 C11orf74Q86VG3 221 aa17.25■□□□□ 0.35
DDX55-212ENST00000544738 TTC30AQ86WT1 665 aa17.25■□□□□ 0.35
DDX55-212ENST00000544738 TSTD1Q8NFU3 115 aa17.25■□□□□ 0.35
DDX55-212ENST00000544738 MRPL45Q9BRJ2 306 aaKnown RBP17.25■□□□□ 0.35
DDX55-212ENST00000544738 NUSAP1Q9BXS6 441 aaKnown RBP17.25■□□□□ 0.35
DDX55-212ENST00000544738 XYLT2Q9H1B5 865 aa17.25■□□□□ 0.35
DDX55-212ENST00000544738 VRTNQ9H8Y1 702 aa17.25■□□□□ 0.35
DDX55-212ENST00000544738 NXF1Q9UBU9 619 aaKnown RBP17.25■□□□□ 0.35
DDX55-212ENST00000544738 ASXL3Q9C0F0 2248 aa17.24■□□□□ 0.35
DDX55-212ENST00000544738 ASH1LQ9NR48 2969 aaKnown RBP17.24■□□□□ 0.35
DDX55-212ENST00000544738 A0A1W2PQ27 194 aa17.24■□□□□ 0.35
DDX55-212ENST00000544738 A0A1W2PQ64 194 aa17.24■□□□□ 0.35
DDX55-212ENST00000544738 A0A1W2PQD8 194 aa17.24■□□□□ 0.35
DDX55-212ENST00000544738 EIF4E1BA6NMX2 242 aaKnown RBP17.24■□□□□ 0.35
DDX55-212ENST00000544738 LRRIQ3A6PVS8 624 aaPredicted RBP17.24■□□□□ 0.35
DDX55-212ENST00000544738 A8MXQ7 604 aa17.24■□□□□ 0.35
DDX55-212ENST00000544738 TADA3O75528 432 aa17.24■□□□□ 0.35
DDX55-212ENST00000544738 NR3C1P04150 777 aa17.24■□□□□ 0.35
DDX55-212ENST00000544738 CKMP06732 381 aa17.24■□□□□ 0.35
DDX55-212ENST00000544738 PFKLP17858 780 aa17.24■□□□□ 0.35
DDX55-212ENST00000544738 PPP3CCP48454 512 aa17.24■□□□□ 0.35
DDX55-212ENST00000544738 NDUFA8P51970 172 aa17.24■□□□□ 0.35
DDX55-212ENST00000544738 KCNB1Q14721 858 aa17.24■□□□□ 0.35
DDX55-212ENST00000544738 PDGFRLQ15198 375 aa17.24■□□□□ 0.35
DDX55-212ENST00000544738 ZNF667Q5HYK9 610 aa17.24■□□□□ 0.35
DDX55-212ENST00000544738 MDH1BQ5I0G3 518 aa17.24■□□□□ 0.35
DDX55-212ENST00000544738 TMC2Q8TDI7 906 aa17.24■□□□□ 0.35
DDX55-212ENST00000544738 EXOC4Q96A65 974 aa17.24■□□□□ 0.35
DDX55-212ENST00000544738 ACDQ96AP0 544 aa17.24■□□□□ 0.35
DDX55-212ENST00000544738 C8orf48Q96LL4 319 aa17.24■□□□□ 0.35
DDX55-212ENST00000544738 ELOVL4Q9GZR5 314 aa17.24■□□□□ 0.35
DDX55-212ENST00000544738 TRPC7Q9HCX4 862 aa17.24■□□□□ 0.35
DDX55-212ENST00000544738 CIZ1Q9ULV3 898 aaPredicted RBP17.24■□□□□ 0.35
DDX55-212ENST00000544738 FRMD4BQ9Y2L6 1034 aa17.24■□□□□ 0.35
DDX55-212ENST00000544738 NUP205Q92621 2012 aa17.24■□□□□ 0.35
DDX55-212ENST00000544738 ADAMTS20P59510 1910 aa17.23■□□□□ 0.35
DDX55-212ENST00000544738 THADAQ6YHU6 1953 aa17.23■□□□□ 0.35
DDX55-212ENST00000544738 IKBKBO14920 756 aa17.23■□□□□ 0.35
DDX55-212ENST00000544738 CALUO43852 315 aaPredicted RBP17.23■□□□□ 0.35
DDX55-212ENST00000544738 RHOBTB3O94955 611 aa17.23■□□□□ 0.35
DDX55-212ENST00000544738 P4HA1P13674 534 aa17.23■□□□□ 0.35
DDX55-212ENST00000544738 HDCP19113 662 aa17.23■□□□□ 0.35
DDX55-212ENST00000544738 GJA4P35212 333 aa17.23■□□□□ 0.35
DDX55-212ENST00000544738 CASP4P49662 377 aa17.23■□□□□ 0.35
DDX55-212ENST00000544738 NOP14P78316 857 aaKnown RBP17.23■□□□□ 0.35
DDX55-212ENST00000544738 NCOA4Q13772 614 aa17.23■□□□□ 0.35
DDX55-212ENST00000544738 ZNF699Q32M78 642 aa17.23■□□□□ 0.35
DDX55-212ENST00000544738 TDRD10Q5VZ19 366 aaKnown RBP17.23■□□□□ 0.35
DDX55-212ENST00000544738 ANO7Q6IWH7 933 aa17.23■□□□□ 0.35
DDX55-212ENST00000544738 TTC16Q8NEE8 873 aa17.23■□□□□ 0.35
DDX55-212ENST00000544738 PLEKHO2Q8TD55 490 aa17.23■□□□□ 0.35
DDX55-212ENST00000544738 CCDC34Q96HJ3 373 aa17.23■□□□□ 0.35
DDX55-212ENST00000544738 CYP2S1Q96SQ9 504 aa17.23■□□□□ 0.35
DDX55-212ENST00000544738 TRPM5Q9NZQ8 1165 aa17.23■□□□□ 0.35
DDX55-212ENST00000544738 TRAF3IP3Q9Y228 551 aa17.23■□□□□ 0.35
DDX55-212ENST00000544738 ZNF638Q14966 1978 aaKnown RBP17.22■□□□□ 0.35
DDX55-212ENST00000544738 F8VP50 259 aa17.22■□□□□ 0.35
DDX55-212ENST00000544738 H0Y626 953 aa17.22■□□□□ 0.35
DDX55-212ENST00000544738 MAP3K13O43283 966 aa17.22■□□□□ 0.35
DDX55-212ENST00000544738 CLSTN1O94985 981 aa17.22■□□□□ 0.35
DDX55-212ENST00000544738 TRIM16O95361 564 aa17.22■□□□□ 0.35
DDX55-212ENST00000544738 C4BPAP04003 597 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms