RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 TRIM21P19474 475 aaKnown RBP12.07□□□□□ -0.48
YBX3-216ENST00000544622 CTHP32929 405 aa12.07□□□□□ -0.48
YBX3-216ENST00000544622 MAGEA9P43362 315 aa12.07□□□□□ -0.48
YBX3-216ENST00000544622 SOX9P48436 509 aa12.07□□□□□ -0.48
YBX3-216ENST00000544622 LRMPQ12912 555 aa12.07□□□□□ -0.48
YBX3-216ENST00000544622 RUNX3Q13761 415 aa12.07□□□□□ -0.48
YBX3-216ENST00000544622 UBXN2BQ14CS0 331 aa12.07□□□□□ -0.48
YBX3-216ENST00000544622 PKDCCQ504Y2 493 aa12.07□□□□□ -0.48
YBX3-216ENST00000544622 TRIM68Q6AZZ1 485 aa12.07□□□□□ -0.48
YBX3-216ENST00000544622 TTC30AQ86WT1 665 aa12.07□□□□□ -0.48
YBX3-216ENST00000544622 ZNF276Q8N554 614 aa12.07□□□□□ -0.48
YBX3-216ENST00000544622 SH3RF2Q8TEC5 729 aa12.07□□□□□ -0.48
YBX3-216ENST00000544622 KAT5Q92993 513 aa12.07□□□□□ -0.48
YBX3-216ENST00000544622 FBXO32Q969P5 355 aa12.07□□□□□ -0.48
YBX3-216ENST00000544622 FAM122AQ96E09 287 aa12.07□□□□□ -0.48
YBX3-216ENST00000544622 CNOT6LQ96LI5 555 aaKnown RBP12.07□□□□□ -0.48
YBX3-216ENST00000544622 NT5C1BQ96P26 610 aa12.07□□□□□ -0.48
YBX3-216ENST00000544622 ZSWIM1Q9BR11 485 aa12.07□□□□□ -0.48
YBX3-216ENST00000544622 DNAI2Q9GZS0 605 aa12.07□□□□□ -0.48
YBX3-216ENST00000544622 IRF2BPLQ9H1B7 796 aa12.07□□□□□ -0.48
YBX3-216ENST00000544622 EBF3Q9H4W6 596 aa12.07□□□□□ -0.48
YBX3-216ENST00000544622 THAP9Q9H5L6 903 aa12.07□□□□□ -0.48
YBX3-216ENST00000544622 CYLDQ9NQC7 956 aa12.07□□□□□ -0.48
YBX3-216ENST00000544622 OSER1Q9NX31 292 aa12.07□□□□□ -0.48
YBX3-216ENST00000544622 PIEZO1Q92508 2521 aa12.07□□□□□ -0.48
YBX3-216ENST00000544622 LEFTY2O00292 366 aa12.06□□□□□ -0.48
YBX3-216ENST00000544622 NCAM2O15394 837 aa12.06□□□□□ -0.48
YBX3-216ENST00000544622 COCHO43405 550 aa12.06□□□□□ -0.48
YBX3-216ENST00000544622 PAEPP09466 180 aa12.06□□□□□ -0.48
YBX3-216ENST00000544622 VDRP11473 427 aa12.06□□□□□ -0.48
YBX3-216ENST00000544622 ZNF132P52740 706 aa12.06□□□□□ -0.48
YBX3-216ENST00000544622 YWHAEP62258 255 aaKnown RBP12.06□□□□□ -0.48
YBX3-216ENST00000544622 CCINQ13939 588 aa12.06□□□□□ -0.48
YBX3-216ENST00000544622 PDGFRLQ15198 375 aa12.06□□□□□ -0.48
YBX3-216ENST00000544622 ANGPT1Q15389 498 aa12.06□□□□□ -0.48
YBX3-216ENST00000544622 EML3Q32P44 896 aa12.06□□□□□ -0.48
YBX3-216ENST00000544622 ITPRIPL2Q3MIP1 535 aa12.06□□□□□ -0.48
YBX3-216ENST00000544622 HECTD3Q5T447 861 aa12.06□□□□□ -0.48
YBX3-216ENST00000544622 DPY19L2P1Q6NXN4 242 aa12.06□□□□□ -0.48
YBX3-216ENST00000544622 RRAGAQ7L523 313 aa12.06□□□□□ -0.48
YBX3-216ENST00000544622 CCDC186Q7Z3E2 898 aa12.06□□□□□ -0.48
YBX3-216ENST00000544622 C1orf210Q8IVY1 113 aa12.06□□□□□ -0.48
YBX3-216ENST00000544622 ARHGEF19Q8IW93 802 aa12.06□□□□□ -0.48
YBX3-216ENST00000544622 ADGRG2Q8IZP9 1017 aa12.06□□□□□ -0.48
YBX3-216ENST00000544622 PPM1KQ8N3J5 372 aa12.06□□□□□ -0.48
YBX3-216ENST00000544622 JAKMIP2Q96AA8 810 aa12.06□□□□□ -0.48
YBX3-216ENST00000544622 KREMEN1Q96MU8 473 aa12.06□□□□□ -0.48
YBX3-216ENST00000544622 PHOX2BQ99453 314 aa12.06□□□□□ -0.48
YBX3-216ENST00000544622 LINC00597Q9H2U6 94 aa12.06□□□□□ -0.48
YBX3-216ENST00000544622 CCSER2Q9H7U1 834 aa12.06□□□□□ -0.48
YBX3-216ENST00000544622 GMIPQ9P107 970 aa12.06□□□□□ -0.48
YBX3-216ENST00000544622 TSPAN16Q9UKR8 245 aa12.06□□□□□ -0.48
YBX3-216ENST00000544622 CPQQ9Y646 472 aa12.06□□□□□ -0.48
YBX3-216ENST00000544622 PATJQ8NI35 1801 aa12.05□□□□□ -0.48
YBX3-216ENST00000544622 CACNA1IQ9P0X4 2223 aa12.05□□□□□ -0.48
YBX3-216ENST00000544622 GTPBP10A4D1E9 387 aaKnown RBP12.05□□□□□ -0.48
YBX3-216ENST00000544622 PROB1E7EW31 1015 aa12.05□□□□□ -0.48
YBX3-216ENST00000544622 TULP2O00295 520 aa12.05□□□□□ -0.48
YBX3-216ENST00000544622 O00370 1275 aa12.05□□□□□ -0.48
YBX3-216ENST00000544622 GREM1O60565 184 aa12.05□□□□□ -0.48
YBX3-216ENST00000544622 ARSAP15289 507 aa12.05□□□□□ -0.48
YBX3-216ENST00000544622 RFX1P22670 979 aa12.05□□□□□ -0.48
YBX3-216ENST00000544622 HOXD11P31277 338 aaPredicted RBP12.05□□□□□ -0.48
YBX3-216ENST00000544622 KPNA1P52294 538 aaPredicted RBP12.05□□□□□ -0.48
YBX3-216ENST00000544622 IFRD2Q12894 506 aaPredicted RBP12.05□□□□□ -0.48
YBX3-216ENST00000544622 GAS6Q14393 721 aa12.05□□□□□ -0.48
YBX3-216ENST00000544622 CNGA2Q16280 664 aa12.05□□□□□ -0.48
YBX3-216ENST00000544622 MIIPQ5JXC2 388 aa12.05□□□□□ -0.48
YBX3-216ENST00000544622 SMYD5Q6GMV2 418 aa12.05□□□□□ -0.48
YBX3-216ENST00000544622 PM20D1Q6GTS8 502 aa12.05□□□□□ -0.48
YBX3-216ENST00000544622 CC2D1AQ6P1N0 951 aaPredicted RBP12.05□□□□□ -0.48
YBX3-216ENST00000544622 KLHDC10Q6PID8 442 aa12.05□□□□□ -0.48
YBX3-216ENST00000544622 TMEM270Q6UE05 265 aa12.05□□□□□ -0.48
YBX3-216ENST00000544622 LCLAT1Q6UWP7 414 aa12.05□□□□□ -0.48
YBX3-216ENST00000544622 SCD5Q86SK9 330 aa12.05□□□□□ -0.48
YBX3-216ENST00000544622 PIGZQ86VD9 579 aa12.05□□□□□ -0.48
YBX3-216ENST00000544622 TTC8Q8TAM2 541 aa12.05□□□□□ -0.48
YBX3-216ENST00000544622 ENOX1Q8TC92 643 aaKnown RBP12.05□□□□□ -0.48
YBX3-216ENST00000544622 TFAP2BQ92481 460 aa12.05□□□□□ -0.48
YBX3-216ENST00000544622 INTS2Q9H0H0 1204 aaKnown RBP12.05□□□□□ -0.48
YBX3-216ENST00000544622 CHRDQ9H2X0 955 aa12.05□□□□□ -0.48
YBX3-216ENST00000544622 ECT2Q9H8V3 914 aa12.05□□□□□ -0.48
YBX3-216ENST00000544622 LMAN1LQ9HAT1 526 aa12.05□□□□□ -0.48
YBX3-216ENST00000544622 NMUR1Q9HB89 426 aa12.05□□□□□ -0.48
YBX3-216ENST00000544622 TLR8Q9NR97 1041 aaKnown RBP12.05□□□□□ -0.48
YBX3-216ENST00000544622 DUS2Q9NX74 493 aaKnown RBP12.05□□□□□ -0.48
YBX3-216ENST00000544622 DACH1Q9UI36 760 aa12.05□□□□□ -0.48
YBX3-216ENST00000544622 WDR87Q6ZQQ6 2873 aa12.05□□□□□ -0.48
YBX3-216ENST00000544622 TRDMT1O14717 391 aaKnown RBP12.04□□□□□ -0.48
YBX3-216ENST00000544622 XPO1O14980 1071 aaKnown RBP12.04□□□□□ -0.48
YBX3-216ENST00000544622 CYP26A1O43174 497 aa12.04□□□□□ -0.48
YBX3-216ENST00000544622 TLR5O60602 858 aa12.04□□□□□ -0.48
YBX3-216ENST00000544622 GABBR2O75899 941 aa12.04□□□□□ -0.48
YBX3-216ENST00000544622 ABL1P00519 1130 aa12.04□□□□□ -0.48
YBX3-216ENST00000544622 SLC9A1P19634 815 aa12.04□□□□□ -0.48
YBX3-216ENST00000544622 GJA4P35212 333 aa12.04□□□□□ -0.48
YBX3-216ENST00000544622 NBL1P41271 181 aa12.04□□□□□ -0.48
YBX3-216ENST00000544622 PLA2G4AP47712 749 aa12.04□□□□□ -0.48
YBX3-216ENST00000544622 PDE4CQ08493 712 aa12.04□□□□□ -0.48
YBX3-216ENST00000544622 GAB4Q2WGN9 574 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms