RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 SERPINB12Q96P63 405 aa17.84■□□□□ 0.45
PTPRO-209ENST00000543886 ZIC5Q96T25 663 aa17.84■□□□□ 0.45
PTPRO-209ENST00000543886 TBCBQ99426 244 aa17.84■□□□□ 0.45
PTPRO-209ENST00000543886 RASSF4Q9H2L5 321 aa17.84■□□□□ 0.45
PTPRO-209ENST00000543886 CHST12Q9NRB3 414 aa17.84■□□□□ 0.45
PTPRO-209ENST00000543886 SRRM3A6NNA2 597 aaPredicted RBP17.83■□□□□ 0.45
PTPRO-209ENST00000543886 CYB561D2O14569 222 aa17.83■□□□□ 0.45
PTPRO-209ENST00000543886 ENDOD1O94919 500 aa17.83■□□□□ 0.45
PTPRO-209ENST00000543886 MYCNP04198 464 aaPredicted RBP17.83■□□□□ 0.45
PTPRO-209ENST00000543886 RPLP2P05387 115 aaKnown RBP17.83■□□□□ 0.45
PTPRO-209ENST00000543886 PECAM1P16284 738 aaPredicted RBP17.83■□□□□ 0.45
PTPRO-209ENST00000543886 SCNN1AP37088 669 aa17.83■□□□□ 0.45
PTPRO-209ENST00000543886 MLH1P40692 756 aa17.83■□□□□ 0.45
PTPRO-209ENST00000543886 MAGEA4P43358 317 aa17.83■□□□□ 0.45
PTPRO-209ENST00000543886 SLC8A3P57103 927 aa17.83■□□□□ 0.45
PTPRO-209ENST00000543886 IFI35P80217 286 aaPredicted RBP17.83■□□□□ 0.45
PTPRO-209ENST00000543886 RNASEH2BQ5TBB1 312 aaKnown RBP17.83■□□□□ 0.45
PTPRO-209ENST00000543886 SLC26A9Q7LBE3 791 aa17.83■□□□□ 0.45
PTPRO-209ENST00000543886 SPATA18Q8TC71 538 aa17.83■□□□□ 0.45
PTPRO-209ENST00000543886 KHSRPQ92945 711 aaKnown RBP eCLIP17.83■□□□□ 0.45
PTPRO-209ENST00000543886 C9orf72Q96LT7 481 aa17.83■□□□□ 0.45
PTPRO-209ENST00000543886 SELENOSQ9BQE4 189 aa17.83■□□□□ 0.45
PTPRO-209ENST00000543886 SAYSD1Q9NPB0 183 aa17.83■□□□□ 0.45
PTPRO-209ENST00000543886 CHRNA1P02708 482 aa17.83■□□□□ 0.44
PTPRO-209ENST00000543886 ATP5DP30049 168 aa17.83■□□□□ 0.44
PTPRO-209ENST00000543886 CCT5P48643 541 aa17.83■□□□□ 0.44
PTPRO-209ENST00000543886 TAOK1Q7L7X3 1001 aa17.83■□□□□ 0.44
PTPRO-209ENST00000543886 OSTM1Q86WC4 334 aa17.83■□□□□ 0.44
PTPRO-209ENST00000543886 CLEC4CQ8WTT0 213 aa17.83■□□□□ 0.44
PTPRO-209ENST00000543886 P3H4Q92791 437 aa17.83■□□□□ 0.44
PTPRO-209ENST00000543886 WNT8BQ93098 351 aa17.83■□□□□ 0.44
PTPRO-209ENST00000543886 HSFY1Q96LI6 401 aa17.83■□□□□ 0.44
PTPRO-209ENST00000543886 CCDC77Q9BR77 488 aa17.83■□□□□ 0.44
PTPRO-209ENST00000543886 C10orf88Q9H8K7 445 aa17.83■□□□□ 0.44
PTPRO-209ENST00000543886 XPNPEP3Q9NQH7 507 aa17.83■□□□□ 0.44
PTPRO-209ENST00000543886 MYO1CO00159 1063 aa17.82■□□□□ 0.44
PTPRO-209ENST00000543886 CAPN15O75808 1086 aa17.82■□□□□ 0.44
PTPRO-209ENST00000543886 PTPN9P43378 593 aa17.82■□□□□ 0.44
PTPRO-209ENST00000543886 GDF10P55107 478 aa17.82■□□□□ 0.44
PTPRO-209ENST00000543886 ROR1Q01973 937 aa17.82■□□□□ 0.44
PTPRO-209ENST00000543886 PRKCZQ05513 592 aa17.82■□□□□ 0.44
PTPRO-209ENST00000543886 CYP4F22Q6NT55 531 aa17.82■□□□□ 0.44
PTPRO-209ENST00000543886 SRLQ86TD4 932 aa17.82■□□□□ 0.44
PTPRO-209ENST00000543886 TTC25Q96NG3 672 aa17.82■□□□□ 0.44
PTPRO-209ENST00000543886 TSPYL2Q9H2G4 693 aaPredicted RBP17.82■□□□□ 0.44
PTPRO-209ENST00000543886 PPANQ9NQ55 473 aaKnown RBP17.82■□□□□ 0.44
PTPRO-209ENST00000543886 GPATCH2LQ9NWQ4 482 aa17.82■□□□□ 0.44
PTPRO-209ENST00000543886 MEIS3P2A8K0S8 358 aa17.81■□□□□ 0.44
PTPRO-209ENST00000543886 E7EVH7 732 aa17.81■□□□□ 0.44
PTPRO-209ENST00000543886 XPO1O14980 1071 aaKnown RBP17.81■□□□□ 0.44
PTPRO-209ENST00000543886 GPR182O15218 404 aa17.81■□□□□ 0.44
PTPRO-209ENST00000543886 ALDH1A1P00352 501 aa17.81■□□□□ 0.44
PTPRO-209ENST00000543886 RBP3P10745 1247 aa17.81■□□□□ 0.44
PTPRO-209ENST00000543886 TKTP29401 623 aaKnown RBP17.81■□□□□ 0.44
PTPRO-209ENST00000543886 RPL34P49207 117 aaKnown RBP17.81■□□□□ 0.44
PTPRO-209ENST00000543886 CTCFP49711 727 aaPredicted RBP17.81■□□□□ 0.44
PTPRO-209ENST00000543886 TRIM32Q13049 653 aa17.81■□□□□ 0.44
PTPRO-209ENST00000543886 NOMO1Q15155 1222 aa17.81■□□□□ 0.44
PTPRO-209ENST00000543886 CENPUQ71F23 418 aa17.81■□□□□ 0.44
PTPRO-209ENST00000543886 ARCQ7LC44 396 aa17.81■□□□□ 0.44
PTPRO-209ENST00000543886 PPIL6Q8IXY8 311 aa17.81■□□□□ 0.44
PTPRO-209ENST00000543886 PRCCQ92733 491 aaPredicted RBP17.81■□□□□ 0.44
PTPRO-209ENST00000543886 RNF157Q96PX1 679 aa17.81■□□□□ 0.44
PTPRO-209ENST00000543886 GAD1Q99259 594 aa17.81■□□□□ 0.44
PTPRO-209ENST00000543886 SNRNP25Q9BV90 132 aaKnown RBP17.81■□□□□ 0.44
PTPRO-209ENST00000543886 MDM4O15151 490 aa17.81■□□□□ 0.44
PTPRO-209ENST00000543886 THP07101 528 aa17.81■□□□□ 0.44
PTPRO-209ENST00000543886 ABHD2P08910 425 aa17.81■□□□□ 0.44
PTPRO-209ENST00000543886 FAM163BP0C2L3 166 aa17.81■□□□□ 0.44
PTPRO-209ENST00000543886 THPOP40225 353 aa17.81■□□□□ 0.44
PTPRO-209ENST00000543886 MMP13P45452 471 aa17.81■□□□□ 0.44
PTPRO-209ENST00000543886 HDAC4P56524 1084 aa17.81■□□□□ 0.44
PTPRO-209ENST00000543886 NKX3-2P78367 333 aa17.81■□□□□ 0.44
PTPRO-209ENST00000543886 CACNB2Q08289 660 aaPredicted RBP17.81■□□□□ 0.44
PTPRO-209ENST00000543886 ZC3H12AQ5D1E8 599 aaKnown RBP17.81■□□□□ 0.44
PTPRO-209ENST00000543886 TNFAIP8L3Q5GJ75 292 aa17.81■□□□□ 0.44
PTPRO-209ENST00000543886 WSCD1Q658N2 575 aa17.81■□□□□ 0.44
PTPRO-209ENST00000543886 DARS2Q6PI48 645 aaKnown RBP17.81■□□□□ 0.44
PTPRO-209ENST00000543886 UNC45BQ8IWX7 931 aa17.81■□□□□ 0.44
PTPRO-209ENST00000543886 FAM71DQ8N9W8 422 aa17.81■□□□□ 0.44
PTPRO-209ENST00000543886 HNRNPABQ99729 332 aaKnown RBP17.81■□□□□ 0.44
PTPRO-209ENST00000543886 RRP15Q9Y3B9 282 aaKnown RBP17.81■□□□□ 0.44
PTPRO-209ENST00000543886 APOL1O14791 398 aa17.8■□□□□ 0.44
PTPRO-209ENST00000543886 ADAMTS4O75173 837 aa17.8■□□□□ 0.44
PTPRO-209ENST00000543886 TCEA3O75764 348 aa17.8■□□□□ 0.44
PTPRO-209ENST00000543886 ASGR1P07306 291 aa17.8■□□□□ 0.44
PTPRO-209ENST00000543886 PTPN1P18031 435 aaKnown RBP17.8■□□□□ 0.44
PTPRO-209ENST00000543886 ACAT1P24752 427 aaKnown RBP17.8■□□□□ 0.44
PTPRO-209ENST00000543886 SEC24CP53992 1094 aa17.8■□□□□ 0.44
PTPRO-209ENST00000543886 STAT4Q14765 748 aa17.8■□□□□ 0.44
PTPRO-209ENST00000543886 C1orf228Q6PIY5 440 aa17.8■□□□□ 0.44
PTPRO-209ENST00000543886 NPNTQ6UXI9 565 aa17.8■□□□□ 0.44
PTPRO-209ENST00000543886 RPAINQ86UA6 219 aa17.8■□□□□ 0.44
PTPRO-209ENST00000543886 NLRP14Q86W24 1093 aa17.8■□□□□ 0.44
PTPRO-209ENST00000543886 VSIG1Q86XK7 387 aa17.8■□□□□ 0.44
PTPRO-209ENST00000543886 MDM1Q8TC05 714 aa17.8■□□□□ 0.44
PTPRO-209ENST00000543886 LPPQ93052 612 aa17.8■□□□□ 0.44
PTPRO-209ENST00000543886 DUSP16Q9BY84 665 aa17.8■□□□□ 0.44
PTPRO-209ENST00000543886 PCDH18Q9HCL0 1135 aa17.8■□□□□ 0.44
PTPRO-209ENST00000543886 FARP1Q9Y4F1 1045 aaPredicted RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms