RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 MXRA7P84157 204 aa14.31□□□□□ -0.12
VPS33A-208ENST00000543633 CNTN2Q02246 1040 aa14.31□□□□□ -0.12
VPS33A-208ENST00000543633 FAAP100Q0VG06 881 aa14.31□□□□□ -0.12
VPS33A-208ENST00000543633 KBTBD12Q3ZCT8 623 aa14.31□□□□□ -0.12
VPS33A-208ENST00000543633 DNAL1Q4LDG9 190 aa14.31□□□□□ -0.12
VPS33A-208ENST00000543633 XYLT1Q86Y38 959 aa14.31□□□□□ -0.12
VPS33A-208ENST00000543633 KCTD6Q8NC69 237 aa14.31□□□□□ -0.12
VPS33A-208ENST00000543633 MCRS1Q96EZ8 462 aa14.31□□□□□ -0.12
VPS33A-208ENST00000543633 TRAPPC9Q96Q05 1148 aa14.31□□□□□ -0.12
VPS33A-208ENST00000543633 SH3GL3Q99963 347 aa14.31□□□□□ -0.12
VPS33A-208ENST00000543633 SIKE1Q9BRV8 207 aa14.31□□□□□ -0.12
VPS33A-208ENST00000543633 XYLT2Q9H1B5 865 aa14.31□□□□□ -0.12
VPS33A-208ENST00000543633 AS3MTQ9HBK9 375 aa14.31□□□□□ -0.12
VPS33A-208ENST00000543633 NRBP2Q9NSY0 501 aa14.31□□□□□ -0.12
VPS33A-208ENST00000543633 ASNSD1Q9NWL6 643 aa14.31□□□□□ -0.12
VPS33A-208ENST00000543633 SCOCQ9UIL1 159 aa14.31□□□□□ -0.12
VPS33A-208ENST00000543633 CPSF3Q9UKF6 684 aaKnown RBP14.31□□□□□ -0.12
VPS33A-208ENST00000543633 ZNF214Q9UL59 606 aaPredicted RBP14.31□□□□□ -0.12
VPS33A-208ENST00000543633 TTLL3Q9Y4R7 772 aa14.31□□□□□ -0.12
VPS33A-208ENST00000543633 CAPN9O14815 690 aa14.3□□□□□ -0.12
VPS33A-208ENST00000543633 B4GALT4O60513 344 aa14.3□□□□□ -0.12
VPS33A-208ENST00000543633 KRT36O76013 467 aa14.3□□□□□ -0.12
VPS33A-208ENST00000543633 TRUB2O95900 331 aaKnown RBP14.3□□□□□ -0.12
VPS33A-208ENST00000543633 TNNC2P02585 160 aa14.3□□□□□ -0.12
VPS33A-208ENST00000543633 C1QAP02745 245 aa14.3□□□□□ -0.12
VPS33A-208ENST00000543633 MYL2P10916 166 aa14.3□□□□□ -0.12
VPS33A-208ENST00000543633 PYGBP11216 843 aa14.3□□□□□ -0.12
VPS33A-208ENST00000543633 SP100P23497 879 aaPredicted RBP14.3□□□□□ -0.12
VPS33A-208ENST00000543633 PRKCHP24723 683 aa14.3□□□□□ -0.12
VPS33A-208ENST00000543633 SMTNL2Q2TAL5 461 aa14.3□□□□□ -0.12
VPS33A-208ENST00000543633 TRMT5Q32P41 509 aaKnown RBP14.3□□□□□ -0.12
VPS33A-208ENST00000543633 TMEM154Q6P9G4 183 aa14.3□□□□□ -0.12
VPS33A-208ENST00000543633 RINLQ6ZS11 566 aa14.3□□□□□ -0.12
VPS33A-208ENST00000543633 NET1Q7Z628 596 aaPredicted RBP14.3□□□□□ -0.12
VPS33A-208ENST00000543633 FAM71DQ8N9W8 422 aa14.3□□□□□ -0.12
VPS33A-208ENST00000543633 DNERQ8NFT8 737 aa14.3□□□□□ -0.12
VPS33A-208ENST00000543633 TTC17Q96AE7 1141 aa14.3□□□□□ -0.12
VPS33A-208ENST00000543633 SRPK1Q96SB4 655 aaKnown RBP14.3□□□□□ -0.12
VPS33A-208ENST00000543633 BCO2Q9BYV7 579 aa14.3□□□□□ -0.12
VPS33A-208ENST00000543633 YIPF3Q9GZM5 350 aa14.3□□□□□ -0.12
VPS33A-208ENST00000543633 SIRPGQ9P1W8 387 aa14.3□□□□□ -0.12
VPS33A-208ENST00000543633 SAE1Q9UBE0 346 aaPredicted RBP14.3□□□□□ -0.12
VPS33A-208ENST00000543633 SORCS3Q9UPU3 1222 aa14.3□□□□□ -0.12
VPS33A-208ENST00000543633 TELO2Q9Y4R8 837 aa14.3□□□□□ -0.12
VPS33A-208ENST00000543633 CAPN14A8MX76 684 aa14.29□□□□□ -0.12
VPS33A-208ENST00000543633 MAP3K7O43318 606 aa14.29□□□□□ -0.12
VPS33A-208ENST00000543633 MSCO60682 206 aa14.29□□□□□ -0.12
VPS33A-208ENST00000543633 BACE1P56817 501 aa14.29□□□□□ -0.12
VPS33A-208ENST00000543633 YWHAGP61981 247 aaKnown RBP eCLIP14.29□□□□□ -0.12
VPS33A-208ENST00000543633 SP4Q02446 784 aa14.29□□□□□ -0.12
VPS33A-208ENST00000543633 EXOC8Q8IYI6 725 aa14.29□□□□□ -0.12
VPS33A-208ENST00000543633 SPATA18Q8TC71 538 aa14.29□□□□□ -0.12
VPS33A-208ENST00000543633 SCG3Q8WXD2 468 aaKnown RBP14.29□□□□□ -0.12
VPS33A-208ENST00000543633 USP6NLQ92738 828 aa14.29□□□□□ -0.12
VPS33A-208ENST00000543633 IFT43Q96FT9 208 aa14.29□□□□□ -0.12
VPS33A-208ENST00000543633 ANKRD36BP1Q96IX9 119 aa14.29□□□□□ -0.12
VPS33A-208ENST00000543633 FAM167AQ96KS9 214 aa14.29□□□□□ -0.12
VPS33A-208ENST00000543633 NR1H4Q96RI1 486 aaPredicted RBP14.29□□□□□ -0.12
VPS33A-208ENST00000543633 TSC22D3Q99576 134 aa14.29□□□□□ -0.12
VPS33A-208ENST00000543633 KLF6Q99612 283 aaPredicted RBP14.29□□□□□ -0.12
VPS33A-208ENST00000543633 ACO2Q99798 780 aaKnown RBP14.29□□□□□ -0.12
VPS33A-208ENST00000543633 TEX13BQ9BXU2 312 aa14.29□□□□□ -0.12
VPS33A-208ENST00000543633 C2orf40Q9H1Z8 148 aa14.29□□□□□ -0.12
VPS33A-208ENST00000543633 FAM124BQ9H5Z6 455 aaPredicted RBP14.29□□□□□ -0.12
VPS33A-208ENST00000543633 GPAMQ9HCL2 828 aa14.29□□□□□ -0.12
VPS33A-208ENST00000543633 ARHGEF4Q9NR80 690 aa14.29□□□□□ -0.12
VPS33A-208ENST00000543633 FBXO6Q9NRD1 293 aaPredicted RBP14.29□□□□□ -0.12
VPS33A-208ENST00000543633 METTL5Q9NRN9 209 aaKnown RBP14.29□□□□□ -0.12
VPS33A-208ENST00000543633 PLLPQ9Y342 182 aa14.29□□□□□ -0.12
VPS33A-208ENST00000543633 MAGEA13PA6NCF6 341 aa14.29□□□□□ -0.12
VPS33A-208ENST00000543633 BIRC5O15392 142 aa14.29□□□□□ -0.12
VPS33A-208ENST00000543633 MAFO75444 373 aaPredicted RBP14.29□□□□□ -0.12
VPS33A-208ENST00000543633 PDHA1P08559 390 aa14.29□□□□□ -0.12
VPS33A-208ENST00000543633 HOXC6P09630 235 aa14.29□□□□□ -0.12
VPS33A-208ENST00000543633 MIPP30301 263 aa14.29□□□□□ -0.12
VPS33A-208ENST00000543633 PGM1P36871 562 aa14.29□□□□□ -0.12
VPS33A-208ENST00000543633 TNFSF9P41273 254 aa14.29□□□□□ -0.12
VPS33A-208ENST00000543633 STXBP2Q15833 593 aa14.29□□□□□ -0.12
VPS33A-208ENST00000543633 C6orf163Q5TEZ5 329 aa14.29□□□□□ -0.12
VPS33A-208ENST00000543633 FAM160B1Q5W0V3 765 aa14.29□□□□□ -0.12
VPS33A-208ENST00000543633 IGDCC3Q8IVU1 814 aa14.29□□□□□ -0.12
VPS33A-208ENST00000543633 MICALL2Q8IY33 904 aa14.29□□□□□ -0.12
VPS33A-208ENST00000543633 KIAA0319LQ8IZA0 1049 aa14.29□□□□□ -0.12
VPS33A-208ENST00000543633 SCYL3Q8IZE3 742 aa14.29□□□□□ -0.12
VPS33A-208ENST00000543633 PDCD7Q8N8D1 485 aaKnown RBP14.29□□□□□ -0.12
VPS33A-208ENST00000543633 SMC1BQ8NDV3 1235 aa14.29□□□□□ -0.12
VPS33A-208ENST00000543633 MCUQ8NE86 351 aa14.29□□□□□ -0.12
VPS33A-208ENST00000543633 ZFAND2BQ8WV99 257 aa14.29□□□□□ -0.12
VPS33A-208ENST00000543633 ADAM33Q9BZ11 813 aa14.29□□□□□ -0.12
VPS33A-208ENST00000543633 MIS12Q9H081 205 aa14.29□□□□□ -0.12
VPS33A-208ENST00000543633 C1orf21Q9H246 121 aa14.29□□□□□ -0.12
VPS33A-208ENST00000543633 STN1Q9H668 368 aaKnown RBP14.29□□□□□ -0.12
VPS33A-208ENST00000543633 USP18Q9UMW8 372 aa14.29□□□□□ -0.12
VPS33A-208ENST00000543633 ZNF487B1APH4 448 aa14.28□□□□□ -0.12
VPS33A-208ENST00000543633 TRIM49D1C9J1S8 452 aa14.28□□□□□ -0.12
VPS33A-208ENST00000543633 TBX10O75333 385 aa14.28□□□□□ -0.12
VPS33A-208ENST00000543633 CIB2O75838 187 aa14.28□□□□□ -0.12
VPS33A-208ENST00000543633 HARSP12081 509 aaKnown RBP14.28□□□□□ -0.12
VPS33A-208ENST00000543633 YBX3P16989 372 aaKnown RBP eCLIP14.28□□□□□ -0.12
VPS33A-208ENST00000543633 TGM2P21980 687 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms