RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 APPL2Q8NEU8 664 aa12.12□□□□□ -0.47
COPS7A-217ENST00000543537 SLC7A14Q8TBB6 771 aa12.12□□□□□ -0.47
COPS7A-217ENST00000543537 ZNF606Q8WXB4 792 aa12.12□□□□□ -0.47
COPS7A-217ENST00000543537 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.12□□□□□ -0.47
COPS7A-217ENST00000543537 DDX1Q92499 740 aaKnown RBP12.12□□□□□ -0.47
COPS7A-217ENST00000543537 RUNDC3BQ96NL0 473 aa12.12□□□□□ -0.47
COPS7A-217ENST00000543537 OSBPL9Q96SU4 736 aa12.12□□□□□ -0.47
COPS7A-217ENST00000543537 CARD6Q9BX69 1037 aa12.12□□□□□ -0.47
COPS7A-217ENST00000543537 CARD9Q9H257 536 aa12.12□□□□□ -0.47
COPS7A-217ENST00000543537 PIDD1Q9HB75 910 aa12.12□□□□□ -0.47
COPS7A-217ENST00000543537 PARVAQ9NVD7 372 aa12.12□□□□□ -0.47
COPS7A-217ENST00000543537 TMEM51Q9NW97 253 aa12.12□□□□□ -0.47
COPS7A-217ENST00000543537 CTTNBP2NLQ9P2B4 639 aa12.12□□□□□ -0.47
COPS7A-217ENST00000543537 PCDHB8Q9UN66 801 aa12.12□□□□□ -0.47
COPS7A-217ENST00000543537 DUSP10Q9Y6W6 482 aa12.12□□□□□ -0.47
COPS7A-217ENST00000543537 DOCK6Q96HP0 2047 aa12.11□□□□□ -0.47
COPS7A-217ENST00000543537 WDR27A2RRH5 827 aa12.11□□□□□ -0.47
COPS7A-217ENST00000543537 CCDC66A2RUB6 948 aa12.11□□□□□ -0.47
COPS7A-217ENST00000543537 CCDC188H7C350 402 aa12.11□□□□□ -0.47
COPS7A-217ENST00000543537 I3L4J1 428 aa12.11□□□□□ -0.47
COPS7A-217ENST00000543537 MYO1FO00160 1098 aa12.11□□□□□ -0.47
COPS7A-217ENST00000543537 THAP12O43422 761 aa12.11□□□□□ -0.47
COPS7A-217ENST00000543537 TADA3O75528 432 aa12.11□□□□□ -0.47
COPS7A-217ENST00000543537 ITGB3P05106 788 aa12.11□□□□□ -0.47
COPS7A-217ENST00000543537 FSHRP23945 695 aa12.11□□□□□ -0.47
COPS7A-217ENST00000543537 GBP2P32456 591 aaPredicted RBP12.11□□□□□ -0.47
COPS7A-217ENST00000543537 CLCN5P51795 746 aa12.11□□□□□ -0.47
COPS7A-217ENST00000543537 PTPN5P54829 565 aa12.11□□□□□ -0.47
COPS7A-217ENST00000543537 INCA1Q0VD86 236 aa12.11□□□□□ -0.47
COPS7A-217ENST00000543537 HTR4Q13639 388 aa12.11□□□□□ -0.47
COPS7A-217ENST00000543537 ACAP1Q15027 740 aa12.11□□□□□ -0.47
COPS7A-217ENST00000543537 BRD3Q15059 726 aa12.11□□□□□ -0.47
COPS7A-217ENST00000543537 CNGA2Q16280 664 aa12.11□□□□□ -0.47
COPS7A-217ENST00000543537 SV2CQ496J9 727 aa12.11□□□□□ -0.47
COPS7A-217ENST00000543537 MAP9Q49MG5 647 aa12.11□□□□□ -0.47
COPS7A-217ENST00000543537 SEZ6Q53EL9 994 aa12.11□□□□□ -0.47
COPS7A-217ENST00000543537 IER5LQ5T953 404 aa12.11□□□□□ -0.47
COPS7A-217ENST00000543537 EFCAB13Q8IY85 973 aa12.11□□□□□ -0.47
COPS7A-217ENST00000543537 LRRC57Q8N9N7 239 aa12.11□□□□□ -0.47
COPS7A-217ENST00000543537 PRSS33Q8NF86 280 aa12.11□□□□□ -0.47
COPS7A-217ENST00000543537 ACTRT1Q8TDG2 376 aa12.11□□□□□ -0.47
COPS7A-217ENST00000543537 PI4K2AQ9BTU6 479 aa12.11□□□□□ -0.47
COPS7A-217ENST00000543537 NT5C1AQ9BXI3 368 aa12.11□□□□□ -0.47
COPS7A-217ENST00000543537 IRF2BPLQ9H1B7 796 aa12.11□□□□□ -0.47
COPS7A-217ENST00000543537 SMOC2Q9H3U7 446 aa12.11□□□□□ -0.47
COPS7A-217ENST00000543537 APOBEC3GQ9HC16 384 aaKnown RBP12.11□□□□□ -0.47
COPS7A-217ENST00000543537 GDAP2Q9NXN4 497 aa12.11□□□□□ -0.47
COPS7A-217ENST00000543537 WNT16Q9UBV4 365 aa12.11□□□□□ -0.47
COPS7A-217ENST00000543537 TUBGCP4Q9UGJ1 667 aa12.11□□□□□ -0.47
COPS7A-217ENST00000543537 AJAP1Q9UKB5 411 aaPredicted RBP12.11□□□□□ -0.47
COPS7A-217ENST00000543537 CDH7Q9ULB5 785 aa12.11□□□□□ -0.47
COPS7A-217ENST00000543537 AGAP1Q9UPQ3 857 aa12.11□□□□□ -0.47
COPS7A-217ENST00000543537 NOTCH4Q99466 2003 aa12.1□□□□□ -0.47
COPS7A-217ENST00000543537 MICAL2O94851 1124 aa12.1□□□□□ -0.47
COPS7A-217ENST00000543537 PDGFBP01127 241 aaPredicted RBP12.1□□□□□ -0.47
COPS7A-217ENST00000543537 ATP1A1P05023 1023 aaKnown RBP12.1□□□□□ -0.47
COPS7A-217ENST00000543537 SRFP11831 508 aa12.1□□□□□ -0.47
COPS7A-217ENST00000543537 CHRNB2P17787 502 aa12.1□□□□□ -0.47
COPS7A-217ENST00000543537 TYMPP19971 482 aa12.1□□□□□ -0.47
COPS7A-217ENST00000543537 MAN1A1P33908 653 aa12.1□□□□□ -0.47
COPS7A-217ENST00000543537 ASPAP45381 313 aa12.1□□□□□ -0.47
COPS7A-217ENST00000543537 VCPP55072 806 aaKnown RBP12.1□□□□□ -0.47
COPS7A-217ENST00000543537 SLC8A3P57103 927 aa12.1□□□□□ -0.47
COPS7A-217ENST00000543537 TCF15Q12870 199 aa12.1□□□□□ -0.47
COPS7A-217ENST00000543537 LMBRD2Q68DH5 695 aaPredicted RBP12.1□□□□□ -0.47
COPS7A-217ENST00000543537 ZNF280DQ6N043 979 aa12.1□□□□□ -0.47
COPS7A-217ENST00000543537 RSRC2Q7L4I2 434 aaKnown RBP12.1□□□□□ -0.47
COPS7A-217ENST00000543537 GRASPQ7Z6J2 395 aaPredicted RBP12.1□□□□□ -0.47
COPS7A-217ENST00000543537 ZDHHC17Q8IUH5 632 aa12.1□□□□□ -0.47
COPS7A-217ENST00000543537 MCOLN2Q8IZK6 566 aa12.1□□□□□ -0.47
COPS7A-217ENST00000543537 TMEM86AQ8N2M4 240 aa12.1□□□□□ -0.47
COPS7A-217ENST00000543537 SLC44A3Q8N4M1 653 aa12.1□□□□□ -0.47
COPS7A-217ENST00000543537 STK32AQ8WU08 396 aa12.1□□□□□ -0.47
COPS7A-217ENST00000543537 TMEM176AQ96HP8 235 aa12.1□□□□□ -0.47
COPS7A-217ENST00000543537 HES6Q96HZ4 224 aa12.1□□□□□ -0.47
COPS7A-217ENST00000543537 TNIP3Q96KP6 325 aa12.1□□□□□ -0.47
COPS7A-217ENST00000543537 TLR10Q9BXR5 811 aa12.1□□□□□ -0.47
COPS7A-217ENST00000543537 ABCB6Q9NP58 842 aa12.1□□□□□ -0.47
COPS7A-217ENST00000543537 CYLDQ9NQC7 956 aa12.1□□□□□ -0.47
COPS7A-217ENST00000543537 SLC2A4RGQ9NR83 387 aa12.1□□□□□ -0.47
COPS7A-217ENST00000543537 HOMER3Q9NSC5 361 aa12.1□□□□□ -0.47
COPS7A-217ENST00000543537 ADAM22Q9P0K1 906 aa12.1□□□□□ -0.47
COPS7A-217ENST00000543537 TRIM10Q9UDY6 481 aa12.1□□□□□ -0.47
COPS7A-217ENST00000543537 AFF4Q9UHB7 1163 aaKnown RBP12.1□□□□□ -0.47
COPS7A-217ENST00000543537 CAPN6Q9Y6Q1 641 aa12.1□□□□□ -0.47
COPS7A-217ENST00000543537 PTPRJQ12913 1337 aa12.1□□□□□ -0.47
COPS7A-217ENST00000543537 GOLGA6L10A0A0M3HER8 536 aa12.09□□□□□ -0.47
COPS7A-217ENST00000543537 PIRO00625 290 aa12.09□□□□□ -0.47
COPS7A-217ENST00000543537 BUB1O43683 1085 aa12.09□□□□□ -0.47
COPS7A-217ENST00000543537 CILPO75339 1184 aa12.09□□□□□ -0.47
COPS7A-217ENST00000543537 MMEP08473 750 aa12.09□□□□□ -0.47
COPS7A-217ENST00000543537 NFICP08651 508 aa12.09□□□□□ -0.47
COPS7A-217ENST00000543537 NPR3P17342 541 aa12.09□□□□□ -0.47
COPS7A-217ENST00000543537 TAF6P49848 677 aa12.09□□□□□ -0.47
COPS7A-217ENST00000543537 GSCP56915 257 aaPredicted RBP12.09□□□□□ -0.47
COPS7A-217ENST00000543537 PTP4A2Q12974 167 aa12.09□□□□□ -0.47
COPS7A-217ENST00000543537 ZNF268Q14587 947 aaPredicted RBP12.09□□□□□ -0.47
COPS7A-217ENST00000543537 SGO2Q562F6 1265 aa12.09□□□□□ -0.47
COPS7A-217ENST00000543537 CWF19L1Q69YN2 538 aaKnown RBP12.09□□□□□ -0.47
COPS7A-217ENST00000543537 ASTLQ6HA08 431 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms