RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 SCNN1GP51170 649 aa7.15□□□□□ -1.26
SRGAP1-206ENST00000543397 VCPP55072 806 aaKnown RBP7.15□□□□□ -1.26
SRGAP1-206ENST00000543397 PTK6Q13882 451 aa7.15□□□□□ -1.26
SRGAP1-206ENST00000543397 TTLL9Q3SXZ7 439 aa7.15□□□□□ -1.26
SRGAP1-206ENST00000543397 ZBTB46Q86UZ6 589 aa7.15□□□□□ -1.26
SRGAP1-206ENST00000543397 SLAIN1Q8ND83 568 aa7.15□□□□□ -1.26
SRGAP1-206ENST00000543397 CELF4Q9BZC1 486 aaKnown RBP7.15□□□□□ -1.26
SRGAP1-206ENST00000543397 TXLNGQ9NUQ3 528 aa7.15□□□□□ -1.26
SRGAP1-206ENST00000543397 SPATS2LQ9NUQ6 558 aaKnown RBP7.15□□□□□ -1.26
SRGAP1-206ENST00000543397 MRPS23Q9Y3D9 190 aaKnown RBP7.15□□□□□ -1.26
SRGAP1-206ENST00000543397 SALL3Q9BXA9 1300 aa7.15□□□□□ -1.26
SRGAP1-206ENST00000543397 A0A1B0GUA9 196 aa7.15□□□□□ -1.27
SRGAP1-206ENST00000543397 HEATR9A2RTY3 570 aa7.15□□□□□ -1.27
SRGAP1-206ENST00000543397 CBX4O00257 560 aa7.15□□□□□ -1.27
SRGAP1-206ENST00000543397 ALDH1A2O94788 518 aa7.15□□□□□ -1.27
SRGAP1-206ENST00000543397 SGPL1O95470 568 aa7.15□□□□□ -1.27
SRGAP1-206ENST00000543397 LSM8O95777 96 aaKnown RBP7.15□□□□□ -1.27
SRGAP1-206ENST00000543397 PAX7P23759 505 aa7.15□□□□□ -1.27
SRGAP1-206ENST00000543397 KLK7P49862 253 aa7.15□□□□□ -1.27
SRGAP1-206ENST00000543397 LIG3P49916 1009 aa7.15□□□□□ -1.27
SRGAP1-206ENST00000543397 NDST1P52848 882 aa7.15□□□□□ -1.27
SRGAP1-206ENST00000543397 GEMP55040 296 aa7.15□□□□□ -1.27
SRGAP1-206ENST00000543397 STAT4Q14765 748 aa7.15□□□□□ -1.27
SRGAP1-206ENST00000543397 ANKRD20A4Q4UJ75 823 aa7.15□□□□□ -1.27
SRGAP1-206ENST00000543397 PABPC1LQ4VXU2 614 aaKnown RBP7.15□□□□□ -1.27
SRGAP1-206ENST00000543397 ANKRD20A8PQ5CZ79 823 aa7.15□□□□□ -1.27
SRGAP1-206ENST00000543397 ANKRD20A2Q5SQ80 823 aa7.15□□□□□ -1.27
SRGAP1-206ENST00000543397 ANKRD20A1Q5TYW2 823 aa7.15□□□□□ -1.27
SRGAP1-206ENST00000543397 FBXL16Q8N461 479 aa7.15□□□□□ -1.27
SRGAP1-206ENST00000543397 BLOC1S5Q8TDH9 187 aa7.15□□□□□ -1.27
SRGAP1-206ENST00000543397 UPF1Q92900 1129 aaKnown RBP eCLIP7.15□□□□□ -1.27
SRGAP1-206ENST00000543397 ELMO2Q96JJ3 720 aa7.15□□□□□ -1.27
SRGAP1-206ENST00000543397 CNPY3Q9BT09 278 aa7.15□□□□□ -1.27
SRGAP1-206ENST00000543397 PORCNQ9H237 461 aa7.15□□□□□ -1.27
SRGAP1-206ENST00000543397 PIF1Q9H611 641 aa7.15□□□□□ -1.27
SRGAP1-206ENST00000543397 PKD2L2Q9NZM6 624 aa7.15□□□□□ -1.27
SRGAP1-206ENST00000543397 CHORDC1Q9UHD1 332 aaPredicted RBP7.15□□□□□ -1.27
SRGAP1-206ENST00000543397 SNCAIPQ9Y6H5 919 aa7.15□□□□□ -1.27
SRGAP1-206ENST00000543397 EML1O00423 815 aa7.15□□□□□ -1.27
SRGAP1-206ENST00000543397 PPM1AP35813 382 aa7.15□□□□□ -1.27
SRGAP1-206ENST00000543397 MLH1P40692 756 aa7.15□□□□□ -1.27
SRGAP1-206ENST00000543397 CLK2P49760 499 aaKnown RBP7.15□□□□□ -1.27
SRGAP1-206ENST00000543397 PCBP1Q15365 356 aaKnown RBP eCLIP7.15□□□□□ -1.27
SRGAP1-206ENST00000543397 CCNG2Q16589 344 aa7.15□□□□□ -1.27
SRGAP1-206ENST00000543397 CENPTQ96BT3 561 aa7.15□□□□□ -1.27
SRGAP1-206ENST00000543397 HIPK3Q9H422 1215 aa7.15□□□□□ -1.27
SRGAP1-206ENST00000543397 GOLPH3Q9H4A6 298 aa7.15□□□□□ -1.27
SRGAP1-206ENST00000543397 SLC28A3Q9HAS3 691 aa7.15□□□□□ -1.27
SRGAP1-206ENST00000543397 EML4Q9HC35 981 aaKnown RBP7.15□□□□□ -1.27
SRGAP1-206ENST00000543397 SF3B1O75533 1304 aaKnown RBP eCLIP7.15□□□□□ -1.27
SRGAP1-206ENST00000543397 LACTBL1A8MY62 500 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 ADCY6O43306 1168 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 TLL1O43897 1013 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 VCLP18206 1134 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 ITIH2P19823 946 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 SPRP35270 261 aaPredicted RBP7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 DAB2P98082 770 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 PDK2Q15119 407 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 SLC39A12Q504Y0 691 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 CENPPQ6IPU0 288 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 TMEM86AQ8N2M4 240 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 ENGASEQ8NFI3 743 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 ITFG2Q969R8 447 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 SKA1Q96BD8 255 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 ZNF669Q96BR6 464 aaPredicted RBP7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 TRIM15Q9C019 465 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 RRN3Q9NYV6 651 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 POLG2Q9UHN1 485 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 TSPAN16Q9UKR8 245 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 NEU2Q9Y3R4 380 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 PIK3CDO00329 1044 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 GYPCP04921 128 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 KITP10721 976 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 STIP1P31948 543 aaKnown RBP7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 CLCN6P51797 869 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 NEK3P51956 506 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 TATDN1Q6P1N9 297 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 PALB2Q86YC2 1186 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 GATAD2AQ86YP4 633 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 RFWD2Q8NHY2 731 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 FAM118BQ9BPY3 351 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 THAP2Q9H0W7 228 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 FGFR1OP2Q9NVK5 253 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 MORC2Q9Y6X9 1032 aaPredicted RBP7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 YDJCA8MPS7 323 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 DCTN3O75935 186 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 SLURP2P0DP57 97 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 ARHGDIAP52565 204 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 C2CD6Q53TS8 623 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 PLPPR4Q7Z2D5 763 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 ILDR1Q86SU0 546 aaPredicted RBP7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 SRLQ86TD4 932 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 TNIP2Q8NFZ5 429 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 PPP1R13LQ8WUF5 828 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 EDEM1Q92611 657 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 ACSF2Q96CM8 615 aaPredicted RBP7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 SENP8Q96LD8 212 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 AP4E1Q9UPM8 1137 aa7.14□□□□□ -1.27
SRGAP1-206ENST00000543397 CA12O43570 354 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms