RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 MYBL2P10244 700 aa9.77□□□□□ -0.85
GNE-206ENST00000543356 IL1R2P27930 398 aa9.77□□□□□ -0.85
GNE-206ENST00000543356 CYP2C18P33260 490 aa9.77□□□□□ -0.85
GNE-206ENST00000543356 COILP38432 576 aaPredicted RBP9.77□□□□□ -0.85
GNE-206ENST00000543356 PTGIRP43119 386 aa9.77□□□□□ -0.85
GNE-206ENST00000543356 OR1G1P47890 313 aa9.77□□□□□ -0.85
GNE-206ENST00000543356 CCL23P55773 120 aa9.77□□□□□ -0.85
GNE-206ENST00000543356 TSPY1Q01534 308 aa9.77□□□□□ -0.85
GNE-206ENST00000543356 ADCY1Q08828 1119 aa9.77□□□□□ -0.85
GNE-206ENST00000543356 TAF5Q15542 800 aa9.77□□□□□ -0.85
GNE-206ENST00000543356 TAZQ16635 292 aa9.77□□□□□ -0.85
GNE-206ENST00000543356 RAB41Q5JT25 222 aa9.77□□□□□ -0.85
GNE-206ENST00000543356 TTC27Q6P3X3 843 aa9.77□□□□□ -0.85
GNE-206ENST00000543356 OR10T2Q8NGX3 314 aa9.77□□□□□ -0.85
GNE-206ENST00000543356 CLEC4CQ8WTT0 213 aa9.77□□□□□ -0.85
GNE-206ENST00000543356 CASKIN2Q8WXE0 1202 aa9.77□□□□□ -0.85
GNE-206ENST00000543356 SMOQ99835 787 aa9.77□□□□□ -0.85
GNE-206ENST00000543356 RAB17Q9H0T7 212 aa9.77□□□□□ -0.85
GNE-206ENST00000543356 C11orf49Q9H6J7 331 aa9.77□□□□□ -0.85
GNE-206ENST00000543356 KLHL11Q9NVR0 708 aa9.77□□□□□ -0.85
GNE-206ENST00000543356 DNAJB4Q9UDY4 337 aa9.77□□□□□ -0.85
GNE-206ENST00000543356 RASAL2Q9UJF2 1139 aa9.77□□□□□ -0.85
GNE-206ENST00000543356 USP18Q9UMW8 372 aa9.77□□□□□ -0.85
GNE-206ENST00000543356 EFR3BQ9Y2G0 817 aa9.77□□□□□ -0.85
GNE-206ENST00000543356 hCG_1818297A0A087WSY0 165 aa9.76□□□□□ -0.85
GNE-206ENST00000543356 ZSCAN5CA6NGD5 496 aaPredicted RBP9.76□□□□□ -0.85
GNE-206ENST00000543356 C3orf70A6NLC5 250 aaPredicted RBP9.76□□□□□ -0.85
GNE-206ENST00000543356 SYN3O14994 580 aa9.76□□□□□ -0.85
GNE-206ENST00000543356 HSF2BPO75031 334 aa9.76□□□□□ -0.85
GNE-206ENST00000543356 GRAP2O75791 330 aa9.76□□□□□ -0.85
GNE-206ENST00000543356 CLTBP09497 229 aa9.76□□□□□ -0.85
GNE-206ENST00000543356 CDKN2BP42772 138 aa9.76□□□□□ -0.85
GNE-206ENST00000543356 EPHB4P54760 987 aa9.76□□□□□ -0.85
GNE-206ENST00000543356 MAP3K7CLP57077 242 aa9.76□□□□□ -0.85
GNE-206ENST00000543356 MRPS5P82675 430 aaKnown RBP9.76□□□□□ -0.85
GNE-206ENST00000543356 YWHAHQ04917 246 aaPredicted RBP9.76□□□□□ -0.85
GNE-206ENST00000543356 ATP13A4Q4VNC1 1196 aa9.76□□□□□ -0.85
GNE-206ENST00000543356 ODF2Q5BJF6 829 aa9.76□□□□□ -0.85
GNE-206ENST00000543356 TFDP3Q5H9I0 405 aa9.76□□□□□ -0.85
GNE-206ENST00000543356 CNKSR3Q6P9H4 555 aa9.76□□□□□ -0.85
GNE-206ENST00000543356 CCDC137Q6PK04 289 aaKnown RBP9.76□□□□□ -0.85
GNE-206ENST00000543356 MFSD7Q6UXD7 560 aa9.76□□□□□ -0.85
GNE-206ENST00000543356 ANKS1BQ7Z6G8 1248 aa9.76□□□□□ -0.85
GNE-206ENST00000543356 SIX6OS1Q8N1H7 587 aa9.76□□□□□ -0.85
GNE-206ENST00000543356 CMASQ8NFW8 434 aaPredicted RBP9.76□□□□□ -0.85
GNE-206ENST00000543356 RAPGEF5Q92565 580 aa9.76□□□□□ -0.85
GNE-206ENST00000543356 CENPIQ92674 756 aaPredicted RBP9.76□□□□□ -0.85
GNE-206ENST00000543356 RNF25Q96BH1 459 aaPredicted RBP9.76□□□□□ -0.85
GNE-206ENST00000543356 FUT8Q9BYC5 575 aa9.76□□□□□ -0.85
GNE-206ENST00000543356 NRDE2Q9H7Z3 1164 aa9.76□□□□□ -0.85
GNE-206ENST00000543356 ZWILCHQ9H900 591 aa9.76□□□□□ -0.85
GNE-206ENST00000543356 LRRC4Q9HBW1 653 aa9.76□□□□□ -0.85
GNE-206ENST00000543356 ATP11BQ9Y2G3 1177 aa9.76□□□□□ -0.85
GNE-206ENST00000543356 UTP11Q9Y3A2 253 aaKnown RBP9.76□□□□□ -0.85
GNE-206ENST00000543356 TTC3P53804 2025 aa9.76□□□□□ -0.85
GNE-206ENST00000543356 LRRD1A4D1F6 860 aa9.76□□□□□ -0.85
GNE-206ENST00000543356 HHLA1C9JL84 531 aa9.76□□□□□ -0.85
GNE-206ENST00000543356 PI4K2BG5E9Z4 385 aa9.76□□□□□ -0.85
GNE-206ENST00000543356 TJP3O95049 919 aa9.76□□□□□ -0.85
GNE-206ENST00000543356 OAZ2O95190 189 aa9.76□□□□□ -0.85
GNE-206ENST00000543356 NNTQ13423 1086 aa9.76□□□□□ -0.85
GNE-206ENST00000543356 C15orf59Q2T9L4 293 aaPredicted RBP9.76□□□□□ -0.85
GNE-206ENST00000543356 EMBQ6PCB8 327 aa9.76□□□□□ -0.85
GNE-206ENST00000543356 CYP4V2Q6ZWL3 525 aaPredicted RBP9.76□□□□□ -0.85
GNE-206ENST00000543356 HDXQ7Z353 690 aa9.76□□□□□ -0.85
GNE-206ENST00000543356 PACS2Q86VP3 889 aa9.76□□□□□ -0.85
GNE-206ENST00000543356 JAMLQ86YT9 394 aa9.76□□□□□ -0.85
GNE-206ENST00000543356 ZMIZ2Q8NF64 920 aa9.76□□□□□ -0.85
GNE-206ENST00000543356 FAM172AQ8WUF8 416 aa9.76□□□□□ -0.85
GNE-206ENST00000543356 TEKT4Q8WW24 435 aa9.76□□□□□ -0.85
GNE-206ENST00000543356 CAVIN3Q969G5 261 aa9.76□□□□□ -0.85
GNE-206ENST00000543356 CFAP57Q96MR6 1250 aa9.76□□□□□ -0.85
GNE-206ENST00000543356 PEBP4Q96S96 227 aa9.76□□□□□ -0.85
GNE-206ENST00000543356 TBCBQ99426 244 aa9.76□□□□□ -0.85
GNE-206ENST00000543356 DDX23Q9BUQ8 820 aaKnown RBP9.76□□□□□ -0.85
GNE-206ENST00000543356 COLEC11Q9BWP8 271 aa9.76□□□□□ -0.85
GNE-206ENST00000543356 DCLK3Q9C098 648 aa9.76□□□□□ -0.85
GNE-206ENST00000543356 PNPLA8Q9NP80 782 aa9.76□□□□□ -0.85
GNE-206ENST00000543356 CNGB3Q9NQW8 809 aa9.76□□□□□ -0.85
GNE-206ENST00000543356 FAM114A2Q9NRY5 505 aa9.76□□□□□ -0.85
GNE-206ENST00000543356 NRP1O14786 923 aa9.75□□□□□ -0.85
GNE-206ENST00000543356 TADA2AO75478 443 aa9.75□□□□□ -0.85
GNE-206ENST00000543356 KDELR1P24390 212 aa9.75□□□□□ -0.85
GNE-206ENST00000543356 GATMP50440 423 aa9.75□□□□□ -0.85
GNE-206ENST00000543356 CCNG2Q16589 344 aa9.75□□□□□ -0.85
GNE-206ENST00000543356 ZFYVE27Q5T4F4 411 aa9.75□□□□□ -0.85
GNE-206ENST00000543356 C4orf50Q6ZRC1 276 aa9.75□□□□□ -0.85
GNE-206ENST00000543356 SYDE1Q6ZW31 735 aaPredicted RBP9.75□□□□□ -0.85
GNE-206ENST00000543356 GSPT2Q8IYD1 628 aaKnown RBP9.75□□□□□ -0.85
GNE-206ENST00000543356 SCML4Q8N228 414 aa9.75□□□□□ -0.85
GNE-206ENST00000543356 LRRC43Q8N309 656 aa9.75□□□□□ -0.85
GNE-206ENST00000543356 SLC2A13Q96QE2 648 aa9.75□□□□□ -0.85
GNE-206ENST00000543356 HEMGNQ9BXL5 484 aa9.75□□□□□ -0.85
GNE-206ENST00000543356 ZCWPW1Q9H0M4 648 aa9.75□□□□□ -0.85
GNE-206ENST00000543356 DMAP1Q9NPF5 467 aaPredicted RBP9.75□□□□□ -0.85
GNE-206ENST00000543356 TMEM39AQ9NV64 488 aa9.75□□□□□ -0.85
GNE-206ENST00000543356 MARCH5Q9NX47 278 aa9.75□□□□□ -0.85
GNE-206ENST00000543356 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.75□□□□□ -0.85
GNE-206ENST00000543356 ADAM28Q9UKQ2 775 aa9.75□□□□□ -0.85
GNE-206ENST00000543356 PRG3Q9Y2Y8 225 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms