RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 TBC1D31Q96DN5 1066 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 ANKRD27Q96NW4 1050 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 LRRC37BQ96QE4 947 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 WRNIP1Q96S55 665 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 BCO2Q9BYV7 579 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 VPS11Q9H270 941 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 VPS37BQ9H9H4 285 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 ETNK1Q9HBU6 452 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 PRDM9Q9NQV7 894 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 WDR35Q9P2L0 1181 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 RPL26L1Q9UNX3 145 aaKnown RBP5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 DOLKQ9UPQ8 538 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 AFG3L2Q9Y4W6 797 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 PCDHB3Q9Y5E6 796 aa5.44□□□□□ -1.54
ATPAF1-212ENST00000542495 LOC102724159A0A0B4J2E5 919 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 TCRBV7S3A2A0A539 114 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 SOWAHBA6NEL2 793 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 APOC4-APOC2K7ER74 178 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 TM9SF1O15321 606 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 MED7O43513 233 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 CST8O60676 142 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 LGR5O75473 907 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 BANF1O75531 89 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 TMEM63AO94886 807 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 IL1BP01584 269 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 APOC2P02655 101 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 C1QAP02745 245 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 PRKCBP05771 671 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 TGFB3P10600 412 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 KRT3P12035 628 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 KRT4P19013 534 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 GNAZP19086 355 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 PSMA2P25787 234 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 ALDH3A1P30838 453 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 SSTR1P30872 391 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 RAD23BP54727 409 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 HTRA3P83110 453 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 LAMTOR4Q0VGL1 99 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 MYO1EQ12965 1108 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 TFDP1Q14186 410 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 MXD4Q14582 209 aaPredicted RBP5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 CRYMQ14894 314 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 PWP2Q15269 919 aaKnown RBP5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 MAPK6Q16659 721 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 HADHQ16836 314 aaKnown RBP5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 CTC1Q2NKJ3 1217 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 ZNF699Q32M78 642 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 PLEKHG4Q58EX7 1191 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 HP1BP3Q5SSJ5 553 aaPredicted RBP5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 HHATQ5VTY9 493 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 MPZL3Q6UWV2 235 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 METTL7BQ6UX53 244 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 ZBTB33Q86T24 672 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 CHSY1Q86X52 802 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 XYLT1Q86Y38 959 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 RIOX2Q8IUF8 465 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 UNC45BQ8IWX7 931 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 GPATCH11Q8N954 259 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 SLC4A11Q8NBS3 891 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 CFAP61Q8NHU2 1237 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 CXorf38Q8TB03 319 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 PYROXD1Q8WU10 500 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 SEPT1Q8WYJ6 367 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 HAUS1Q96CS2 278 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 MCRS1Q96EZ8 462 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 FAM167AQ96KS9 214 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 PAFAH2Q99487 392 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 PAIP2Q9BPZ3 127 aaKnown RBP5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 C2orf40Q9H1Z8 148 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 FZD8Q9H461 694 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 SAR1AQ9NR31 198 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 SLC5A4Q9NY91 659 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 KANSL3Q9P2N6 904 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 SAE1Q9UBE0 346 aaPredicted RBP5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 TJP2Q9UDY2 1190 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 LNPEPQ9UIQ6 1025 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 SIX4Q9UIU6 781 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 CEP83Q9Y592 693 aa5.43□□□□□ -1.54
ATPAF1-212ENST00000542495 E7ENQ6 273 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 FZD9O00144 591 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 ACKR2O00590 384 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 HNRNPCL1O60812 293 aaKnown RBP5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 DNAJC6O75061 913 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 PEX11AO75192 247 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 IL18RAPO95256 599 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 TGDSO95455 350 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 TRUB2O95900 331 aaKnown RBP5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 IFNB1P01574 187 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 TNNC2P02585 160 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 ERBB2P04626 1255 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 CD48P09326 243 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 HARSP12081 509 aaKnown RBP5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 ADRA1DP25100 572 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 MIPP30301 263 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 PCK1P35558 622 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 TCF7P36402 384 aaPredicted RBP5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 ETV4P43268 484 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 PSMC4P43686 418 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 NEK3P51956 506 aa5.42□□□□□ -1.54
ATPAF1-212ENST00000542495 PTPN5P54829 565 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms