RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 SPOPO43791 374 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 GAS2O43903 313 aaKnown RBP5.38□□□□□ -1.55
SNHG1-218ENST00000541615 CDH16O75309 829 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 NIPSNAP2O75323 286 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 TBX10O75333 385 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 LGR5O75473 907 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 CLN5O75503 358 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 MYO1DO94832 1006 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 HAUS5O94927 633 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 SNX4O95219 450 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 APOC1P02654 83 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 TFAP2AP05549 437 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 CALB1P05937 261 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 ATP1A3P13637 1013 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 EEF2P13639 858 aaKnown RBP5.38□□□□□ -1.55
SNHG1-218ENST00000541615 CCDC130P13994 396 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 ANPEPP15144 967 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 PCSK2P16519 638 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 ZNF23P17027 643 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 ALAS2P22557 587 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 CXCR2P25025 360 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 MARCKSP29966 332 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-218ENST00000541615 HLA-FP30511 346 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 SLC5A2P31639 672 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 IDUAP35475 653 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 ATP6V1E1P36543 226 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 PBX1P40424 430 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 PHKA1P46020 1223 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 IREB2P48200 963 aaKnown RBP5.38□□□□□ -1.55
SNHG1-218ENST00000541615 PRIM2P49643 509 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 SLC12A2P55011 1212 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 PSMD4P55036 377 aaKnown RBP5.38□□□□□ -1.55
SNHG1-218ENST00000541615 NPEPPSP55786 919 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 RAB4BP61018 213 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 CSNK2BP67870 215 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 GSTO1P78417 241 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 CDK16Q00536 496 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 STRN3Q13033 797 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 ZNF846Q147U1 533 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 NCF4Q15080 339 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 GPR162Q16538 588 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 NADK2Q4G0N4 442 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 KHDC1Q4VXA5 237 aaKnown RBP5.38□□□□□ -1.55
SNHG1-218ENST00000541615 VWA3BQ502W6 1294 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 SLC10A5Q5PT55 438 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 TTC39AQ5SRH9 613 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 BEND3Q5T5X7 828 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 NT5DC1Q5TFE4 455 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 FAM205BPQ63HN1 556 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 MFSD5Q6N075 450 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 FAM180BQ6P0A1 224 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 XKRXQ6PP77 449 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 KDELC1Q6UW63 502 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 UGT2A3Q6UWM9 527 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-218ENST00000541615 SLFN11Q7Z7L1 901 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 TTC7BQ86TV6 843 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 FERMT3Q86UX7 667 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 HORMAD1Q86X24 394 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 ZNF354CQ86Y25 554 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 GALNT13Q8IUC8 556 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 TBC1D21Q8IYX1 336 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 CNTROBQ8N137 903 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 FBXL6Q8N531 539 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 PCSK9Q8NBP7 692 aaKnown RBP5.38□□□□□ -1.55
SNHG1-218ENST00000541615 PPHLN1Q8NEY8 458 aaKnown RBP5.38□□□□□ -1.55
SNHG1-218ENST00000541615 OR52K1Q8NGK4 314 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 OR6S1Q8NH40 331 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 CAPSLQ8WWF8 208 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 CKAP2Q8WWK9 683 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 JDP2Q8WYK2 163 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 DPF2Q92785 391 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 CNDP2Q96KP4 475 aaKnown RBP5.38□□□□□ -1.55
SNHG1-218ENST00000541615 MAGEB18Q96M61 343 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 TTC25Q96NG3 672 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 INPP4AQ96PE3 977 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-218ENST00000541615 PHOX2BQ99453 314 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 USB1Q9BQ65 265 aaKnown RBP5.38□□□□□ -1.55
SNHG1-218ENST00000541615 TMEM79Q9BSE2 394 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 WACQ9BTA9 647 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 NOC4LQ9BVI4 516 aaKnown RBP5.38□□□□□ -1.55
SNHG1-218ENST00000541615 EMILIN2Q9BXX0 1053 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 NT5C3AQ9H0P0 336 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 KCTD10Q9H3F6 313 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 RC3H2Q9HBD1 1191 aaKnown RBP5.38□□□□□ -1.55
SNHG1-218ENST00000541615 MRM3Q9HC36 420 aaKnown RBP5.38□□□□□ -1.55
SNHG1-218ENST00000541615 TRIM39Q9HCM9 518 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 MRPL40Q9NQ50 206 aaKnown RBP5.38□□□□□ -1.55
SNHG1-218ENST00000541615 C20orf96Q9NUD7 363 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-218ENST00000541615 FAM105AQ9NUU6 356 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 SLC38A7Q9NVC3 462 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 GDAP2Q9NXN4 497 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 PARP2Q9UGN5 583 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 FBXO40Q9UH90 709 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 GTF2IRD1Q9UHL9 959 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 BCAP29Q9UHQ4 241 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 IPO11Q9UI26 975 aaKnown RBP5.38□□□□□ -1.55
SNHG1-218ENST00000541615 GLS2Q9UI32 602 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 APPL1Q9UKG1 709 aa5.38□□□□□ -1.55
SNHG1-218ENST00000541615 DOLKQ9UPQ8 538 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms