RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 TMLHEQ9NVH6 421 aa29.22■■■□□ 2.27
CCM2-218ENST00000541586 PRRC2BQ5JSZ5 2229 aaKnown RBP29.22■■■□□ 2.27
CCM2-218ENST00000541586 TMEM191CA6NGB0 347 aa29.21■■■□□ 2.27
CCM2-218ENST00000541586 GOLGA8SH3BPF8 625 aa29.21■■■□□ 2.27
CCM2-218ENST00000541586 PDE2AO00408 941 aaPredicted RBP29.21■■■□□ 2.27
CCM2-218ENST00000541586 CLASP2O75122 1294 aaKnown RBP29.21■■■□□ 2.27
CCM2-218ENST00000541586 TADA3O75528 432 aa29.21■■■□□ 2.27
CCM2-218ENST00000541586 RGS7P49802 495 aa29.21■■■□□ 2.27
CCM2-218ENST00000541586 RNF19BQ6ZMZ0 732 aa29.21■■■□□ 2.27
CCM2-218ENST00000541586 MCEEQ96PE7 176 aa29.21■■■□□ 2.27
CCM2-218ENST00000541586 E5RJQ4 531 aa29.2■■■□□ 2.27
CCM2-218ENST00000541586 SPOPO43791 374 aa29.2■■■□□ 2.27
CCM2-218ENST00000541586 CKAP4Q07065 602 aaKnown RBP29.2■■■□□ 2.27
CCM2-218ENST00000541586 RAB33AQ14088 237 aa29.2■■■□□ 2.27
CCM2-218ENST00000541586 DCUN1D2Q6PH85 259 aa29.2■■■□□ 2.27
CCM2-218ENST00000541586 STK32AQ8WU08 396 aa29.2■■■□□ 2.27
CCM2-218ENST00000541586 CD101Q93033 1021 aa29.2■■■□□ 2.27
CCM2-218ENST00000541586 SELENOOQ9BVL4 669 aa29.2■■■□□ 2.27
CCM2-218ENST00000541586 SLC4A5Q9BY07 1137 aa29.2■■■□□ 2.27
CCM2-218ENST00000541586 MIF4GDA9UHW6 222 aaKnown RBP29.2■■■□□ 2.26
CCM2-218ENST00000541586 CES2O00748 559 aa29.2■■■□□ 2.26
CCM2-218ENST00000541586 TGM5O43548 720 aa29.2■■■□□ 2.26
CCM2-218ENST00000541586 PROSCO94903 275 aa29.2■■■□□ 2.26
CCM2-218ENST00000541586 ADCY1Q08828 1119 aa29.2■■■□□ 2.26
CCM2-218ENST00000541586 GPR17Q13304 367 aa29.2■■■□□ 2.26
CCM2-218ENST00000541586 PAQR9Q6ZVX9 377 aa29.2■■■□□ 2.26
CCM2-218ENST00000541586 ZNF461Q8TAF7 563 aa29.2■■■□□ 2.26
CCM2-218ENST00000541586 MCRS1Q96EZ8 462 aa29.2■■■□□ 2.26
CCM2-218ENST00000541586 MS4A14Q96JA4 679 aa29.2■■■□□ 2.26
CCM2-218ENST00000541586 PBKQ96KB5 322 aa29.2■■■□□ 2.26
CCM2-218ENST00000541586 GUCD1Q96NT3 240 aa29.2■■■□□ 2.26
CCM2-218ENST00000541586 CTAGE15A4D2H0 777 aa29.19■■■□□ 2.26
CCM2-218ENST00000541586 SIGLEC16A6NMB1 481 aa29.19■■■□□ 2.26
CCM2-218ENST00000541586 PIK3R2O00459 728 aa29.19■■■□□ 2.26
CCM2-218ENST00000541586 CLDN5O00501 218 aa29.19■■■□□ 2.26
CCM2-218ENST00000541586 CTAGE8P0CG41 777 aa29.19■■■□□ 2.26
CCM2-218ENST00000541586 CTAGE6Q86UF2 777 aa29.19■■■□□ 2.26
CCM2-218ENST00000541586 CTAGE4Q8IX94 777 aa29.19■■■□□ 2.26
CCM2-218ENST00000541586 ATAD1Q8NBU5 361 aa29.19■■■□□ 2.26
CCM2-218ENST00000541586 UBE2Q2Q8WVN8 375 aa29.19■■■□□ 2.26
CCM2-218ENST00000541586 MIS12Q9H081 205 aa29.19■■■□□ 2.26
CCM2-218ENST00000541586 MTMR10Q9NXD2 777 aa29.19■■■□□ 2.26
CCM2-218ENST00000541586 ABI2Q9NYB9 513 aaPredicted RBP29.19■■■□□ 2.26
CCM2-218ENST00000541586 EHD2Q9NZN4 543 aa29.19■■■□□ 2.26
CCM2-218ENST00000541586 NOL12Q9UGY1 213 aaKnown RBP eCLIP29.19■■■□□ 2.26
CCM2-218ENST00000541586 V9GYY5 206 aaPredicted RBP29.19■■■□□ 2.26
CCM2-218ENST00000541586 EFCAB8A8MWE9 144 aa29.18■■■□□ 2.26
CCM2-218ENST00000541586 GLUD1P00367 558 aa29.18■■■□□ 2.26
CCM2-218ENST00000541586 KRT3P12035 628 aa29.18■■■□□ 2.26
CCM2-218ENST00000541586 SLC1A1P43005 524 aa29.18■■■□□ 2.26
CCM2-218ENST00000541586 CLCN4P51793 760 aa29.18■■■□□ 2.26
CCM2-218ENST00000541586 NAA30Q147X3 362 aaPredicted RBP29.18■■■□□ 2.26
CCM2-218ENST00000541586 FAM171BQ6P995 826 aa29.18■■■□□ 2.26
CCM2-218ENST00000541586 TMEM110Q86TL2 294 aa29.18■■■□□ 2.26
CCM2-218ENST00000541586 MYCBPAPQ8TBZ2 947 aa29.18■■■□□ 2.26
CCM2-218ENST00000541586 KRT35Q92764 455 aa29.18■■■□□ 2.26
CCM2-218ENST00000541586 PCED1BQ96HM7 432 aa29.18■■■□□ 2.26
CCM2-218ENST00000541586 B3GNT5Q9BYG0 378 aa29.18■■■□□ 2.26
CCM2-218ENST00000541586 SMARCAL1Q9NZC9 954 aa29.18■■■□□ 2.26
CCM2-218ENST00000541586 IP6K2Q9UHH9 426 aa29.18■■■□□ 2.26
CCM2-218ENST00000541586 EYSQ5T1H1 3165 aa29.17■■■□□ 2.26
CCM2-218ENST00000541586 RBM10P98175 930 aaKnown RBP29.17■■■□□ 2.26
CCM2-218ENST00000541586 DUSP6Q16828 381 aa29.17■■■□□ 2.26
CCM2-218ENST00000541586 CCDC181Q5TID7 509 aa29.17■■■□□ 2.26
CCM2-218ENST00000541586 TSC1Q92574 1164 aa29.17■■■□□ 2.26
CCM2-218ENST00000541586 ALG3Q92685 438 aa29.17■■■□□ 2.26
CCM2-218ENST00000541586 MED10Q9BTT4 135 aa29.17■■■□□ 2.26
CCM2-218ENST00000541586 DUSP16Q9BY84 665 aa29.17■■■□□ 2.26
CCM2-218ENST00000541586 RNF14Q9UBS8 474 aa29.17■■■□□ 2.26
CCM2-218ENST00000541586 SLC27A5Q9Y2P5 690 aa29.17■■■□□ 2.26
CCM2-218ENST00000541586 GABBR2O75899 941 aa29.17■■■□□ 2.26
CCM2-218ENST00000541586 ABLIM3O94929 683 aa29.17■■■□□ 2.26
CCM2-218ENST00000541586 FOSL2P15408 326 aa29.17■■■□□ 2.26
CCM2-218ENST00000541586 POU3F3P20264 500 aaPredicted RBP29.17■■■□□ 2.26
CCM2-218ENST00000541586 ELF1P32519 619 aa29.17■■■□□ 2.26
CCM2-218ENST00000541586 MARCKSL1P49006 195 aa29.17■■■□□ 2.26
CCM2-218ENST00000541586 MAPRE1Q15691 268 aaKnown RBP29.17■■■□□ 2.26
CCM2-218ENST00000541586 CCDC85BQ15834 202 aaPredicted RBP29.17■■■□□ 2.26
CCM2-218ENST00000541586 CFAP221Q4G0U5 840 aa29.17■■■□□ 2.26
CCM2-218ENST00000541586 FAM183BPQ6ZVS7 135 aa29.17■■■□□ 2.26
CCM2-218ENST00000541586 SPATA2LQ8IUW3 424 aaPredicted RBP29.17■■■□□ 2.26
CCM2-218ENST00000541586 UBL4BQ8N7F7 174 aa29.17■■■□□ 2.26
CCM2-218ENST00000541586 MYLPFQ96A32 169 aa29.17■■■□□ 2.26
CCM2-218ENST00000541586 PKMYT1Q99640 499 aa29.17■■■□□ 2.26
CCM2-218ENST00000541586 CYP4F11Q9HBI6 524 aa29.17■■■□□ 2.26
CCM2-218ENST00000541586 METTL5Q9NRN9 209 aaKnown RBP29.17■■■□□ 2.26
CCM2-218ENST00000541586 HCFC2Q9Y5Z7 792 aa29.17■■■□□ 2.26
CCM2-218ENST00000541586 MTMR11A4FU01 709 aa29.16■■■□□ 2.26
CCM2-218ENST00000541586 EPCAMP16422 314 aa29.16■■■□□ 2.26
CCM2-218ENST00000541586 CTNNA2P26232 953 aa29.16■■■□□ 2.26
CCM2-218ENST00000541586 CTNNA1P35221 906 aaKnown RBP29.16■■■□□ 2.26
CCM2-218ENST00000541586 RFC1P35251 1148 aaPredicted RBP29.16■■■□□ 2.26
CCM2-218ENST00000541586 OGDHQ02218 1023 aa29.16■■■□□ 2.26
CCM2-218ENST00000541586 ZNF252P-AS1Q0IIN9 211 aa29.16■■■□□ 2.26
CCM2-218ENST00000541586 HYAL1Q12794 435 aa29.16■■■□□ 2.26
CCM2-218ENST00000541586 DUSP4Q13115 394 aa29.16■■■□□ 2.26
CCM2-218ENST00000541586 NFE2Q16621 373 aaPredicted RBP29.16■■■□□ 2.26
CCM2-218ENST00000541586 DCAF12L1Q5VU92 463 aa29.16■■■□□ 2.26
CCM2-218ENST00000541586 OR6B2Q6IFH4 312 aa29.16■■■□□ 2.26
CCM2-218ENST00000541586 JOSD2Q8TAC2 188 aa29.16■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms