RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 GRK7Q8WTQ7 553 aa5.94□□□□□ -1.46
DDB1-219ENST00000541513 KLHDC7BQ96G42 594 aa5.94□□□□□ -1.46
DDB1-219ENST00000541513 MRGPRX4Q96LA9 322 aa5.94□□□□□ -1.46
DDB1-219ENST00000541513 MFSD14AQ96MC6 490 aa5.94□□□□□ -1.46
DDB1-219ENST00000541513 FUZQ9BT04 418 aa5.94□□□□□ -1.46
DDB1-219ENST00000541513 MYL10Q9BUA6 226 aa5.94□□□□□ -1.46
DDB1-219ENST00000541513 CYP4F12Q9HCS2 524 aa5.94□□□□□ -1.46
DDB1-219ENST00000541513 HOXC10Q9NYD6 342 aa5.94□□□□□ -1.46
DDB1-219ENST00000541513 CALCOCO1Q9P1Z2 691 aa5.94□□□□□ -1.46
DDB1-219ENST00000541513 C5AR2Q9P296 337 aa5.94□□□□□ -1.46
DDB1-219ENST00000541513 EXTL2Q9UBQ6 330 aa5.94□□□□□ -1.46
DDB1-219ENST00000541513 LPAR3Q9UBY5 353 aa5.94□□□□□ -1.46
DDB1-219ENST00000541513 CPA4Q9UI42 421 aa5.94□□□□□ -1.46
DDB1-219ENST00000541513 MINPP1Q9UNW1 487 aa5.94□□□□□ -1.46
DDB1-219ENST00000541513 MED16Q9Y2X0 877 aa5.94□□□□□ -1.46
DDB1-219ENST00000541513 PCDHA3Q9Y5H8 950 aa5.94□□□□□ -1.46
DDB1-219ENST00000541513 PCDHA13Q9Y5I0 950 aa5.94□□□□□ -1.46
DDB1-219ENST00000541513 FAM169AQ9Y6X4 670 aa5.94□□□□□ -1.46
DDB1-219ENST00000541513 CACNA1FO60840 1977 aa5.94□□□□□ -1.46
DDB1-219ENST00000541513 NUP188Q5SRE5 1749 aa5.94□□□□□ -1.46
DDB1-219ENST00000541513 A0A087WZ62 844 aa5.93□□□□□ -1.46
DDB1-219ENST00000541513 UBA6A0AVT1 1052 aaPredicted RBP5.93□□□□□ -1.46
DDB1-219ENST00000541513 PTGES3LE9PB15 166 aa5.93□□□□□ -1.46
DDB1-219ENST00000541513 TXNL1O43396 289 aa5.93□□□□□ -1.46
DDB1-219ENST00000541513 ADAM20O43506 726 aa5.93□□□□□ -1.46
DDB1-219ENST00000541513 KIF1CO43896 1103 aaKnown RBP5.93□□□□□ -1.46
DDB1-219ENST00000541513 COQ9O75208 318 aa5.93□□□□□ -1.46
DDB1-219ENST00000541513 NEFHP12036 1026 aa5.93□□□□□ -1.46
DDB1-219ENST00000541513 EGR1P18146 543 aa5.93□□□□□ -1.46
DDB1-219ENST00000541513 BCL6P41182 706 aa5.93□□□□□ -1.46
DDB1-219ENST00000541513 PRPHP41219 470 aa5.93□□□□□ -1.46
DDB1-219ENST00000541513 CARSP49589 748 aaKnown RBP5.93□□□□□ -1.46
DDB1-219ENST00000541513 RGS3P49796 1198 aa5.93□□□□□ -1.46
DDB1-219ENST00000541513 GPC3P51654 580 aa5.93□□□□□ -1.46
DDB1-219ENST00000541513 RARSP54136 660 aaKnown RBP5.93□□□□□ -1.46
DDB1-219ENST00000541513 RIPK4P57078 832 aa5.93□□□□□ -1.46
DDB1-219ENST00000541513 STARD6P59095 220 aa5.93□□□□□ -1.46
DDB1-219ENST00000541513 POLR2FP61218 127 aaKnown RBP5.93□□□□□ -1.46
DDB1-219ENST00000541513 CCT2P78371 535 aaKnown RBP5.93□□□□□ -1.46
DDB1-219ENST00000541513 YWHAHQ04917 246 aaPredicted RBP5.93□□□□□ -1.46
DDB1-219ENST00000541513 DDR1Q08345 913 aa5.93□□□□□ -1.46
DDB1-219ENST00000541513 MRPL28Q13084 256 aaKnown RBP5.93□□□□□ -1.46
DDB1-219ENST00000541513 SEC23BQ15437 767 aa5.93□□□□□ -1.46
DDB1-219ENST00000541513 MRPL14Q6P1L8 145 aaKnown RBP5.93□□□□□ -1.46
DDB1-219ENST00000541513 TAF2Q6P1X5 1199 aa5.93□□□□□ -1.46
DDB1-219ENST00000541513 C16orf87Q6PH81 154 aa5.93□□□□□ -1.46
DDB1-219ENST00000541513 SLC2A7Q6PXP3 512 aa5.93□□□□□ -1.46
DDB1-219ENST00000541513 EP400NLQ6ZTU2 488 aa5.93□□□□□ -1.46
DDB1-219ENST00000541513 LRRC8DQ7L1W4 858 aa5.93□□□□□ -1.46
DDB1-219ENST00000541513 ZER1Q7Z7L7 766 aa5.93□□□□□ -1.46
DDB1-219ENST00000541513 SCN4BQ8IWT1 228 aa5.93□□□□□ -1.46
DDB1-219ENST00000541513 OR6B3Q8NGW1 331 aa5.93□□□□□ -1.46
DDB1-219ENST00000541513 CFHR4Q92496 578 aa5.93□□□□□ -1.46
DDB1-219ENST00000541513 HSPH1Q92598 858 aa5.93□□□□□ -1.46
DDB1-219ENST00000541513 FAM162AQ96A26 154 aa5.93□□□□□ -1.46
DDB1-219ENST00000541513 FOXRED1Q96CU9 486 aaPredicted RBP5.93□□□□□ -1.46
DDB1-219ENST00000541513 KTI12Q96EK9 354 aaPredicted RBP5.93□□□□□ -1.46
DDB1-219ENST00000541513 LRRC46Q96FV0 321 aa5.93□□□□□ -1.46
DDB1-219ENST00000541513 CHAMP1Q96JM3 812 aa5.93□□□□□ -1.46
DDB1-219ENST00000541513 COX4I2Q96KJ9 171 aa5.93□□□□□ -1.46
DDB1-219ENST00000541513 C16orf45Q96MC5 204 aaPredicted RBP5.93□□□□□ -1.46
DDB1-219ENST00000541513 TMEM237Q96Q45 408 aa5.93□□□□□ -1.46
DDB1-219ENST00000541513 CITED2Q99967 270 aaPredicted RBP5.93□□□□□ -1.46
DDB1-219ENST00000541513 FDXACB1Q9BRP7 624 aaPredicted RBP5.93□□□□□ -1.46
DDB1-219ENST00000541513 HDAC8Q9BY41 377 aa5.93□□□□□ -1.46
DDB1-219ENST00000541513 TRIM5Q9C035 493 aa5.93□□□□□ -1.46
DDB1-219ENST00000541513 NT5C3AQ9H0P0 336 aa5.93□□□□□ -1.46
DDB1-219ENST00000541513 TNMDQ9H2S6 317 aa5.93□□□□□ -1.46
DDB1-219ENST00000541513 COPS7BQ9H9Q2 264 aaPredicted RBP5.93□□□□□ -1.46
DDB1-219ENST00000541513 HCFC1R1Q9NWW0 138 aa5.93□□□□□ -1.46
DDB1-219ENST00000541513 TMOD3Q9NYL9 352 aa5.93□□□□□ -1.46
DDB1-219ENST00000541513 TAS2R10Q9NYW0 307 aa5.93□□□□□ -1.46
DDB1-219ENST00000541513 HECAQ9UBI9 543 aaPredicted RBP5.93□□□□□ -1.46
DDB1-219ENST00000541513 CACNG4Q9UBN1 327 aa5.93□□□□□ -1.46
DDB1-219ENST00000541513 LAMP5Q9UJQ1 280 aa5.93□□□□□ -1.46
DDB1-219ENST00000541513 CA14Q9ULX7 337 aa5.93□□□□□ -1.46
DDB1-219ENST00000541513 DERAQ9Y315 318 aa5.93□□□□□ -1.46
DDB1-219ENST00000541513 COL5A3P25940 1745 aaPredicted RBP5.93□□□□□ -1.46
DDB1-219ENST00000541513 MYH14Q7Z406 1995 aaKnown RBP5.93□□□□□ -1.46
DDB1-219ENST00000541513 TJP1Q07157 1748 aa5.92□□□□□ -1.46
DDB1-219ENST00000541513 QSER1Q2KHR3 1735 aa5.92□□□□□ -1.46
DDB1-219ENST00000541513 MBD3L4A6NDZ8 208 aaPredicted RBP5.92□□□□□ -1.46
DDB1-219ENST00000541513 MBD3L3A6NE82 208 aaPredicted RBP5.92□□□□□ -1.46
DDB1-219ENST00000541513 GPR25O00155 361 aa5.92□□□□□ -1.46
DDB1-219ENST00000541513 IGF2BP3O00425 579 aaKnown RBP eCLIP5.92□□□□□ -1.46
DDB1-219ENST00000541513 MEIS1O00470 390 aa5.92□□□□□ -1.46
DDB1-219ENST00000541513 PLSCR1O15162 318 aa5.92□□□□□ -1.46
DDB1-219ENST00000541513 FOXP2O15409 715 aa5.92□□□□□ -1.46
DDB1-219ENST00000541513 LRRN2O75325 713 aa5.92□□□□□ -1.46
DDB1-219ENST00000541513 TPPPO94811 219 aa5.92□□□□□ -1.46
DDB1-219ENST00000541513 GSPT1P15170 499 aaKnown RBP5.92□□□□□ -1.46
DDB1-219ENST00000541513 VAV1P15498 845 aa5.92□□□□□ -1.46
DDB1-219ENST00000541513 IL10P22301 178 aa5.92□□□□□ -1.46
DDB1-219ENST00000541513 FGFR4P22455 802 aa5.92□□□□□ -1.46
DDB1-219ENST00000541513 EPHA8P29322 1005 aaPredicted RBP5.92□□□□□ -1.46
DDB1-219ENST00000541513 HOXA11P31270 313 aaPredicted RBP5.92□□□□□ -1.46
DDB1-219ENST00000541513 AKT1P31749 480 aa5.92□□□□□ -1.46
DDB1-219ENST00000541513 HSPA4P34932 840 aa5.92□□□□□ -1.46
DDB1-219ENST00000541513 GPR15P49685 360 aa5.92□□□□□ -1.46
DDB1-219ENST00000541513 HERVK_113P62684 666 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms