RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 TPM1P09493 284 aa19.77■□□□□ 0.76
VPS33A-205ENST00000541169 USP17L7P0C7H9 530 aa19.77■□□□□ 0.76
VPS33A-205ENST00000541169 ZDHHC11BP0C7U3 371 aa19.77■□□□□ 0.76
VPS33A-205ENST00000541169 RPL34P49207 117 aaKnown RBP19.77■□□□□ 0.76
VPS33A-205ENST00000541169 TKTL1P51854 596 aa19.77■□□□□ 0.76
VPS33A-205ENST00000541169 ZNF268Q14587 947 aaPredicted RBP19.77■□□□□ 0.76
VPS33A-205ENST00000541169 SPECC1LQ69YQ0 1117 aa19.77■□□□□ 0.76
VPS33A-205ENST00000541169 PM20D1Q6GTS8 502 aa19.77■□□□□ 0.76
VPS33A-205ENST00000541169 PPP1R2P3Q6NXS1 205 aa19.77■□□□□ 0.76
VPS33A-205ENST00000541169 TRIM72Q6ZMU5 477 aa19.77■□□□□ 0.76
VPS33A-205ENST00000541169 CMTM8Q8IZV2 173 aa19.77■□□□□ 0.76
VPS33A-205ENST00000541169 TMEM35BQ8NCS4 154 aa19.77■□□□□ 0.76
VPS33A-205ENST00000541169 MSANTD4Q8NCY6 345 aa19.77■□□□□ 0.76
VPS33A-205ENST00000541169 UBA3Q8TBC4 463 aa19.77■□□□□ 0.76
VPS33A-205ENST00000541169 ZSCAN18Q8TBC5 510 aaPredicted RBP19.77■□□□□ 0.76
VPS33A-205ENST00000541169 IRGQQ8WZA9 623 aa19.77■□□□□ 0.76
VPS33A-205ENST00000541169 SYN2Q92777 582 aaPredicted RBP19.77■□□□□ 0.76
VPS33A-205ENST00000541169 SECISBP2LQ93073 1101 aaKnown RBP19.77■□□□□ 0.76
VPS33A-205ENST00000541169 ELSPBP1Q96BH3 223 aa19.77■□□□□ 0.76
VPS33A-205ENST00000541169 CLIC5Q9NZA1 410 aa19.77■□□□□ 0.76
VPS33A-205ENST00000541169 LIMD1Q9UGP4 676 aa19.77■□□□□ 0.76
VPS33A-205ENST00000541169 GFPT2O94808 682 aa19.76■□□□□ 0.75
VPS33A-205ENST00000541169 CDR2Q01850 454 aa19.76■□□□□ 0.75
VPS33A-205ENST00000541169 IFRD2Q12894 506 aaPredicted RBP19.76■□□□□ 0.75
VPS33A-205ENST00000541169 HECTD3Q5T447 861 aa19.76■□□□□ 0.75
VPS33A-205ENST00000541169 KLHDC10Q6PID8 442 aa19.76■□□□□ 0.75
VPS33A-205ENST00000541169 EPS8L1Q8TE68 723 aa19.76■□□□□ 0.75
VPS33A-205ENST00000541169 GOLGA1Q92805 767 aa19.76■□□□□ 0.75
VPS33A-205ENST00000541169 KCNK12Q9HB15 430 aa19.76■□□□□ 0.75
VPS33A-205ENST00000541169 AIPL1Q9NZN9 384 aa19.76■□□□□ 0.75
VPS33A-205ENST00000541169 OBSL1O75147 1896 aa19.75■□□□□ 0.75
VPS33A-205ENST00000541169 NUP210Q8TEM1 1887 aaPredicted RBP19.75■□□□□ 0.75
VPS33A-205ENST00000541169 DPYSL4O14531 572 aa19.75■□□□□ 0.75
VPS33A-205ENST00000541169 RALAP11233 206 aa19.75■□□□□ 0.75
VPS33A-205ENST00000541169 HDCP19113 662 aa19.75■□□□□ 0.75
VPS33A-205ENST00000541169 CDH5P33151 784 aaPredicted RBP19.75■□□□□ 0.75
VPS33A-205ENST00000541169 TDGQ13569 410 aa19.75■□□□□ 0.75
VPS33A-205ENST00000541169 HTR4Q13639 388 aa19.75■□□□□ 0.75
VPS33A-205ENST00000541169 FAM78AQ5JUQ0 283 aa19.75■□□□□ 0.75
VPS33A-205ENST00000541169 TMEM110Q86TL2 294 aa19.75■□□□□ 0.75
VPS33A-205ENST00000541169 DDX42Q86XP3 938 aaKnown RBP eCLIP19.75■□□□□ 0.75
VPS33A-205ENST00000541169 RNF135Q8IUD6 432 aa19.75■□□□□ 0.75
VPS33A-205ENST00000541169 ZDHHC17Q8IUH5 632 aa19.75■□□□□ 0.75
VPS33A-205ENST00000541169 UBALD2Q8IYN6 164 aa19.75■□□□□ 0.75
VPS33A-205ENST00000541169 CELF5Q8N6W0 485 aaKnown RBP19.75■□□□□ 0.75
VPS33A-205ENST00000541169 MAB21L3Q8N8X9 362 aa19.75■□□□□ 0.75
VPS33A-205ENST00000541169 DEPDC1BQ8WUY9 529 aa19.75■□□□□ 0.75
VPS33A-205ENST00000541169 SLC4A5Q9BY07 1137 aa19.75■□□□□ 0.75
VPS33A-205ENST00000541169 SLC46A2Q9BY10 475 aa19.75■□□□□ 0.75
VPS33A-205ENST00000541169 TTYH3Q9C0H2 523 aa19.75■□□□□ 0.75
VPS33A-205ENST00000541169 TDP1Q9NUW8 608 aa19.75■□□□□ 0.75
VPS33A-205ENST00000541169 CAPN11Q9UMQ6 739 aa19.75■□□□□ 0.75
VPS33A-205ENST00000541169 SORCS3Q9UPU3 1222 aa19.75■□□□□ 0.75
VPS33A-205ENST00000541169 BZW2Q9Y6E2 419 aaKnown RBP19.75■□□□□ 0.75
VPS33A-205ENST00000541169 TADA3O75528 432 aa19.74■□□□□ 0.75
VPS33A-205ENST00000541169 OLFM2O95897 454 aa19.74■□□□□ 0.75
VPS33A-205ENST00000541169 OAS1P00973 400 aaKnown RBP19.74■□□□□ 0.75
VPS33A-205ENST00000541169 ALADP13716 330 aa19.74■□□□□ 0.75
VPS33A-205ENST00000541169 TCF3P15923 654 aa19.74■□□□□ 0.75
VPS33A-205ENST00000541169 GJA1P17302 382 aa19.74■□□□□ 0.75
VPS33A-205ENST00000541169 SP100P23497 879 aaPredicted RBP19.74■□□□□ 0.75
VPS33A-205ENST00000541169 ZBED6P86452 979 aa19.74■□□□□ 0.75
VPS33A-205ENST00000541169 CYP4F8P98187 520 aa19.74■□□□□ 0.75
VPS33A-205ENST00000541169 SFMBT2Q5VUG0 894 aa19.74■□□□□ 0.75
VPS33A-205ENST00000541169 PMF1Q6P1K2 205 aa19.74■□□□□ 0.75
VPS33A-205ENST00000541169 GPRIN1Q7Z2K8 1008 aa19.74■□□□□ 0.75
VPS33A-205ENST00000541169 ARID3BQ8IVW6 561 aaPredicted RBP19.74■□□□□ 0.75
VPS33A-205ENST00000541169 DDX1Q92499 740 aaKnown RBP19.74■□□□□ 0.75
VPS33A-205ENST00000541169 BAP1Q92560 729 aa19.74■□□□□ 0.75
VPS33A-205ENST00000541169 TRIM5Q9C035 493 aa19.74■□□□□ 0.75
VPS33A-205ENST00000541169 RBSNQ9H1K0 784 aa19.74■□□□□ 0.75
VPS33A-205ENST00000541169 OLA1Q9NTK5 396 aaKnown RBP19.74■□□□□ 0.75
VPS33A-205ENST00000541169 GMIPQ9P107 970 aa19.74■□□□□ 0.75
VPS33A-205ENST00000541169 NOCTQ9UK39 431 aaKnown RBP19.74■□□□□ 0.75
VPS33A-205ENST00000541169 LUC7L2Q9Y383 392 aaKnown RBP19.74■□□□□ 0.75
VPS33A-205ENST00000541169 ABL1P00519 1130 aa19.73■□□□□ 0.75
VPS33A-205ENST00000541169 CKMP06732 381 aa19.73■□□□□ 0.75
VPS33A-205ENST00000541169 PNMA6AP0CW24 399 aaPredicted RBP19.73■□□□□ 0.75
VPS33A-205ENST00000541169 SLC7A9P82251 487 aa19.73■□□□□ 0.75
VPS33A-205ENST00000541169 PLCB2Q00722 1185 aa19.73■□□□□ 0.75
VPS33A-205ENST00000541169 GOLGA8FQ08AF8 430 aa19.73■□□□□ 0.75
VPS33A-205ENST00000541169 GOLGA8DPQ0D2H9 430 aa19.73■□□□□ 0.75
VPS33A-205ENST00000541169 ADIGQ0VDE8 80 aa19.73■□□□□ 0.75
VPS33A-205ENST00000541169 PTPN21Q16825 1174 aa19.73■□□□□ 0.75
VPS33A-205ENST00000541169 TXNDC8Q6A555 127 aa19.73■□□□□ 0.75
VPS33A-205ENST00000541169 DENND1BQ6P3S1 775 aa19.73■□□□□ 0.75
VPS33A-205ENST00000541169 BEND5Q7L4P6 421 aa19.73■□□□□ 0.75
VPS33A-205ENST00000541169 NOP9Q86U38 636 aaKnown RBP19.73■□□□□ 0.75
VPS33A-205ENST00000541169 IPO4Q8TEX9 1081 aaKnown RBP19.73■□□□□ 0.75
VPS33A-205ENST00000541169 ZSWIM3Q96MP5 696 aa19.73■□□□□ 0.75
VPS33A-205ENST00000541169 NACA2Q9H009 215 aa19.73■□□□□ 0.75
VPS33A-205ENST00000541169 TRPC7Q9HCX4 862 aa19.73■□□□□ 0.75
VPS33A-205ENST00000541169 ACP6Q9NPH0 428 aa19.73■□□□□ 0.75
VPS33A-205ENST00000541169 ST7Q9NRC1 585 aa19.73■□□□□ 0.75
VPS33A-205ENST00000541169 TMEM51Q9NW97 253 aa19.73■□□□□ 0.75
VPS33A-205ENST00000541169 THG1LQ9NWX6 298 aaKnown RBP19.73■□□□□ 0.75
VPS33A-205ENST00000541169 CHORDC1Q9UHD1 332 aaPredicted RBP19.73■□□□□ 0.75
VPS33A-205ENST00000541169 ARHGAP26Q9UNA1 814 aa19.73■□□□□ 0.75
VPS33A-205ENST00000541169 NUMBLQ9Y6R0 609 aa19.73■□□□□ 0.75
VPS33A-205ENST00000541169 ANAPC1Q9H1A4 1944 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms