RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 LMTK2Q8IWU2 1503 aa15.46■□□□□ 0.07
SMARCA4-207ENST00000541122 E2F8A0AVK6 867 aa15.46■□□□□ 0.06
SMARCA4-207ENST00000541122 CCDC142Q17RM4 750 aa15.46■□□□□ 0.06
SMARCA4-207ENST00000541122 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.46■□□□□ 0.062e-7■■■■■ 278.5
SMARCA4-207ENST00000541122 C9orf16Q9BUW7 83 aa15.46■□□□□ 0.06
SMARCA4-207ENST00000541122 PLGRKTQ9HBL7 147 aa15.46■□□□□ 0.06
SMARCA4-207ENST00000541122 KIAA1257Q9ULG3 409 aa15.46■□□□□ 0.06
SMARCA4-207ENST00000541122 CLOCKO15516 846 aa15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 AKAP3O75969 853 aa15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 ABHD2P08910 425 aa15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 GARTP22102 1010 aa15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 RRM1P23921 792 aa15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 CDK7P50613 346 aa15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 NR1H2P55055 460 aa15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 MGAT5Q09328 741 aa15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 NFYCQ13952 458 aa15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 DGUOKQ16854 277 aa15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 Q4G0T1 1027 aa15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 APPL2Q8NEU8 664 aa15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 ZNF333Q96JL9 665 aa15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 GCNAQ96QF7 691 aa15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 PI4K2AQ9BTU6 479 aa15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 BDH2Q9BUT1 245 aa15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 PNMA3Q9UL41 463 aa15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 C1orf232A0A0U1RR37 186 aa15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 PNMA8CA0A1B0GUJ8 204 aa15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 MED26O95402 600 aa15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 NCKAP1LP55160 1127 aa15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 AMPD2Q01433 879 aa15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 RRP1BQ14684 758 aaKnown RBP15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 LACTB2Q53H82 288 aaPredicted RBP15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 CCDC80Q76M96 950 aa15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 ZNF34Q8IZ26 560 aa15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 VCPIP1Q96JH7 1222 aa15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 ZFYVE19Q96K21 471 aa15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 AXIN2Q9Y2T1 843 aa15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 IQGAP1P46940 1657 aa15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 SNTNA6NMZ2 147 aa15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 RAD17O75943 681 aa15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 RARAP10276 462 aa15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 CASP4P49662 377 aa15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 GEMP55040 296 aa15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 RPL10AP62906 217 aaKnown RBP15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 AUHQ13825 339 aaKnown RBP15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 SLC25A41Q8N5S1 370 aa15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 SRPK1Q96SB4 655 aaKnown RBP15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 TBC1D10AQ9BXI6 508 aa15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 AVENQ9NQS1 362 aaPredicted RBP15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 DAGLAQ9Y4D2 1042 aa15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 SNX9Q9Y5X1 595 aa15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 V9GYQ6 96 aa15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 KCNJ2P63252 427 aa15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 KRT33BQ14525 404 aa15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 TKFCQ3LXA3 575 aa15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 CYP4A22Q5TCH4 519 aa15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 CACHD1Q5VU97 1274 aa15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 DHFR2Q86XF0 187 aa15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 CENPLQ8N0S6 344 aaPredicted RBP15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 TMEM121Q9BTD3 319 aa15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 ATXN10Q9UBB4 475 aa15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 RUVBL2Q9Y230 463 aaKnown RBP15.45■□□□□ 0.06
SMARCA4-207ENST00000541122 UBDO15205 165 aa15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 CBFA2T3O75081 653 aa15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 MED24O75448 989 aa15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 ADRA2BP18089 450 aa15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 KRT20P35900 424 aa15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 PKN2Q16513 984 aaKnown RBP15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 KYAT3Q6YP21 454 aaKnown RBP15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 THUMPD3Q9BV44 507 aaKnown RBP15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 NDEL1Q9GZM8 345 aa15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 PCYOX1Q9UHG3 505 aa15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 MSH4O15457 936 aa15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 RGS5O15539 181 aa15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 TBC1D12O60347 775 aa15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 SHOX2O60902 331 aaPredicted RBP15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 SUPT7LO94864 414 aa15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 RARBP10826 455 aa15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 PRKCIP41743 596 aa15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 GPSM2P81274 684 aa15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 POU4F1Q01851 419 aa15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 RSBN1Q5VWQ0 802 aaPredicted RBP15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 MTERF3Q96E29 417 aa15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 SPON2Q9BUD6 331 aa15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 LMCD1Q9NZU5 365 aa15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 SPATA31A3Q5VYP0 1347 aa15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 CEP152O94986 1710 aa15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 TSHRP16473 764 aa15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 RAD51Q06609 339 aa15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 CIAPIN1Q6FI81 312 aa15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 SLC22A9Q8IVM8 553 aa15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 LPAR1Q92633 364 aa15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 TMEM143Q96AN5 459 aa15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 H2AFY2Q9P0M6 372 aaPredicted RBP15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 CROTQ9UKG9 612 aa15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 PRR12Q9ULL5 1215 aa15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 SIK3Q9Y2K2 1263 aa15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 ACOT9Q9Y305 439 aa15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 CNOT3O75175 753 aaKnown RBP15.44■□□□□ 0.06
SMARCA4-207ENST00000541122 MYL4P12829 197 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms