RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 TBC1D13Q9NVG8 400 aa8.89□□□□□ -0.99
CHD4-208ENST00000540960 POLR3BQ9NW08 1133 aaPredicted RBP8.89□□□□□ -0.99
CHD4-208ENST00000540960 MRFAP1Q9Y605 127 aa8.89□□□□□ -0.99
CHD4-208ENST00000540960 FHOD1Q9Y613 1164 aa8.89□□□□□ -0.99
CHD4-208ENST00000540960 ATMQ13315 3056 aa8.89□□□□□ -0.99
CHD4-208ENST00000540960 CREBBPQ92793 2442 aa8.89□□□□□ -0.99
CHD4-208ENST00000540960 THADAQ6YHU6 1953 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 CTAGE15A4D2H0 777 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 INO80B-WBP1J3KQ70 363 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 CES2O00748 559 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 EPHB6O15197 1021 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 MEFVO15553 781 aaPredicted RBP8.88□□□□□ -0.99
CHD4-208ENST00000540960 ERLIN2O94905 339 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 C22orf31O95567 290 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 TNNC2P02585 160 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 ADH1AP07327 375 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 TMEM253P0C7T8 217 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 CTAGE8P0CG41 777 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 TRIM49P0CI25 452 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 TRIM49CP0CI26 452 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 MYBL1P10243 752 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 DLATP10515 647 aaKnown RBP8.88□□□□□ -0.99
CHD4-208ENST00000540960 KLRC1P26715 233 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 HOXA6P31267 233 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 PIK3CAP42336 1068 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 PDE6CP51160 858 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 ARID5AQ03989 594 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 PTK2Q05397 1052 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 BIRC3Q13489 604 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 TRPC3Q13507 836 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 TCEAL1Q15170 157 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 PPP2R5EQ16537 467 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 ZACNQ401N2 412 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 CBWD6Q4V339 395 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 CBWD3Q5JTY5 395 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 CBWD5Q5RIA9 395 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 PAPD7Q5XG87 772 aaKnown RBP8.88□□□□□ -0.99
CHD4-208ENST00000540960 PKN3Q6P5Z2 889 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 LILRA6Q6PI73 481 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 SV2AQ7L0J3 742 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 CTAGE6Q86UF2 777 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 MARCH9Q86YJ5 346 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 BRSK2Q8IWQ3 736 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 CTAGE4Q8IX94 777 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 NPAS3Q8IXF0 933 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 RHOT2Q8IXI1 618 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 FAM71AQ8IYT1 594 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 SLC35F6Q8N357 371 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 PPM1KQ8N3J5 372 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 PNPLA1Q8N8W4 532 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 RABGGTAQ92696 567 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 ANKRD36BP1Q96IX9 119 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 SCLT1Q96NL6 688 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 ACO2Q99798 780 aaKnown RBP8.88□□□□□ -0.99
CHD4-208ENST00000540960 SH2D3AQ9BRG2 576 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 SELENOOQ9BVL4 669 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 TARS2Q9BW92 718 aaKnown RBP8.88□□□□□ -0.99
CHD4-208ENST00000540960 MRPL9Q9BYD2 267 aaKnown RBP8.88□□□□□ -0.99
CHD4-208ENST00000540960 CCDC113Q9H0I3 377 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 SLC32A1Q9H598 525 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 PRORYQ9H606 182 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 ASB7Q9H672 318 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 PLEKHA5Q9HAU0 1116 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 ZDHHC7Q9NXF8 308 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 ADAMTS1Q9UHI8 967 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 NAGPAQ9UK23 515 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 AKT3Q9Y243 479 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 PCDHB2Q9Y5E7 798 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 PIAS3Q9Y6X2 628 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 MGAQ8IWI9 3026 aa8.88□□□□□ -0.99
CHD4-208ENST00000540960 ANKRD62A6NC57 917 aa8.87□□□□□ -0.99
CHD4-208ENST00000540960 GOLGA8IPA6NC78 632 aa8.87□□□□□ -0.99
CHD4-208ENST00000540960 GOLGA8JA6NMD2 632 aa8.87□□□□□ -0.99
CHD4-208ENST00000540960 LRRIQ3A6PVS8 624 aaPredicted RBP8.87□□□□□ -0.99
CHD4-208ENST00000540960 ZBTB42B2RXF5 422 aa8.87□□□□□ -0.99
CHD4-208ENST00000540960 H0Y626 953 aa8.87□□□□□ -0.99
CHD4-208ENST00000540960 KHNYNO15037 678 aaKnown RBP8.87□□□□□ -0.99
CHD4-208ENST00000540960 XPOTO43592 962 aaKnown RBP8.87□□□□□ -0.99
CHD4-208ENST00000540960 GPR32O75388 356 aa8.87□□□□□ -0.99
CHD4-208ENST00000540960 ERLIN1O75477 346 aa8.87□□□□□ -0.99
CHD4-208ENST00000540960 ECI2O75521 394 aa8.87□□□□□ -0.99
CHD4-208ENST00000540960 ZMYND10O75800 440 aa8.87□□□□□ -0.99
CHD4-208ENST00000540960 DDHD2O94830 711 aa8.87□□□□□ -0.99
CHD4-208ENST00000540960 TRIM16O95361 564 aa8.87□□□□□ -0.99
CHD4-208ENST00000540960 ATICP31939 592 aa8.87□□□□□ -0.99
CHD4-208ENST00000540960 CYP27A1Q02318 531 aa8.87□□□□□ -0.99
CHD4-208ENST00000540960 GFPT1Q06210 699 aaPredicted RBP8.87□□□□□ -0.99
CHD4-208ENST00000540960 PPP3CAQ08209 521 aa8.87□□□□□ -0.99
CHD4-208ENST00000540960 CYP4F3Q08477 520 aa8.87□□□□□ -0.99
CHD4-208ENST00000540960 ZNF568Q3ZCX4 644 aa8.87□□□□□ -0.99
CHD4-208ENST00000540960 CCDC181Q5TID7 509 aa8.87□□□□□ -0.99
CHD4-208ENST00000540960 DPY19L2P1Q6NXN4 242 aa8.87□□□□□ -0.99
CHD4-208ENST00000540960 HACE1Q8IYU2 909 aa8.87□□□□□ -0.99
CHD4-208ENST00000540960 LMO3Q8TAP4 145 aa8.87□□□□□ -0.99
CHD4-208ENST00000540960 SHC3Q92529 594 aa8.87□□□□□ -0.99
CHD4-208ENST00000540960 DNASE1L2Q92874 299 aa8.87□□□□□ -0.99
CHD4-208ENST00000540960 SAAL1Q96ER3 474 aa8.87□□□□□ -0.99
CHD4-208ENST00000540960 MCRS1Q96EZ8 462 aa8.87□□□□□ -0.99
CHD4-208ENST00000540960 B3GALT6Q96L58 329 aa8.87□□□□□ -0.99
CHD4-208ENST00000540960 NLRP4Q96MN2 994 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms