RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 DENND4CQ5VZ89 1909 aa12.13□□□□□ -0.47
TMEM258-205ENST00000540434 OBSL1O75147 1896 aa12.12□□□□□ -0.47
TMEM258-205ENST00000540434 A0A1W2PRU2 124 aa12.12□□□□□ -0.47
TMEM258-205ENST00000540434 TADA3O75528 432 aa12.12□□□□□ -0.47
TMEM258-205ENST00000540434 CCDC130P13994 396 aa12.12□□□□□ -0.47
TMEM258-205ENST00000540434 PCSK1P29120 753 aa12.12□□□□□ -0.47
TMEM258-205ENST00000540434 ALDH1A3P47895 512 aa12.12□□□□□ -0.47
TMEM258-205ENST00000540434 CYP27A1Q02318 531 aa12.12□□□□□ -0.47
TMEM258-205ENST00000540434 INCA1Q0VD86 236 aa12.12□□□□□ -0.47
TMEM258-205ENST00000540434 NFE2Q16621 373 aaPredicted RBP12.12□□□□□ -0.47
TMEM258-205ENST00000540434 CFAP221Q4G0U5 840 aa12.12□□□□□ -0.47
TMEM258-205ENST00000540434 ZNF394Q53GI3 561 aa12.12□□□□□ -0.47
TMEM258-205ENST00000540434 SH3PXD2AQ5TCZ1 1133 aa12.12□□□□□ -0.47
TMEM258-205ENST00000540434 DPY19L2P1Q6NXN4 242 aa12.12□□□□□ -0.47
TMEM258-205ENST00000540434 PDZD3Q86UT5 571 aa12.12□□□□□ -0.47
TMEM258-205ENST00000540434 CREBRFQ8IUR6 639 aa12.12□□□□□ -0.47
TMEM258-205ENST00000540434 SPATA2LQ8IUW3 424 aaPredicted RBP12.12□□□□□ -0.47
TMEM258-205ENST00000540434 ARHGEF19Q8IW93 802 aa12.12□□□□□ -0.47
TMEM258-205ENST00000540434 FUKQ8N0W3 1084 aa12.12□□□□□ -0.47
TMEM258-205ENST00000540434 CRYBG2Q8N1P7 616 aa12.12□□□□□ -0.47
TMEM258-205ENST00000540434 B3GALNT2Q8NCR0 500 aa12.12□□□□□ -0.47
TMEM258-205ENST00000540434 ZMIZ2Q8NF64 920 aa12.12□□□□□ -0.47
TMEM258-205ENST00000540434 C2orf15Q8WU43 125 aaKnown RBP12.12□□□□□ -0.47
TMEM258-205ENST00000540434 FAM3CQ92520 227 aa12.12□□□□□ -0.47
TMEM258-205ENST00000540434 LRRC3BQ96PB8 259 aa12.12□□□□□ -0.47
TMEM258-205ENST00000540434 KCNK16Q96T55 309 aa12.12□□□□□ -0.47
TMEM258-205ENST00000540434 NIF3L1Q9GZT8 377 aa12.12□□□□□ -0.47
TMEM258-205ENST00000540434 METTL14Q9HCE5 456 aaKnown RBP12.12□□□□□ -0.47
TMEM258-205ENST00000540434 TRPV5Q9NQA5 729 aa12.12□□□□□ -0.47
TMEM258-205ENST00000540434 HSFX1Q9UBD0 423 aa12.12□□□□□ -0.47
TMEM258-205ENST00000540434 MAGEC2Q9UBF1 373 aaPredicted RBP12.12□□□□□ -0.47
TMEM258-205ENST00000540434 ATG2BQ96BY7 2078 aa12.12□□□□□ -0.47
TMEM258-205ENST00000540434 ZNF638Q14966 1978 aaKnown RBP12.11□□□□□ -0.47
TMEM258-205ENST00000540434 SLC38A8A6NNN8 435 aa12.11□□□□□ -0.47
TMEM258-205ENST00000540434 C4orf47A7E2U8 309 aa12.11□□□□□ -0.47
TMEM258-205ENST00000540434 GOLGA6L22H0YM25 854 aa12.11□□□□□ -0.47
TMEM258-205ENST00000540434 RNF225M0QZC1 329 aaPredicted RBP12.11□□□□□ -0.47
TMEM258-205ENST00000540434 HYAL3O43820 417 aaPredicted RBP12.11□□□□□ -0.47
TMEM258-205ENST00000540434 CILPO75339 1184 aa12.11□□□□□ -0.47
TMEM258-205ENST00000540434 CLSTN1O94985 981 aa12.11□□□□□ -0.47
TMEM258-205ENST00000540434 EPN2O95208 641 aa12.11□□□□□ -0.47
TMEM258-205ENST00000540434 PAPSS2O95340 614 aaPredicted RBP12.11□□□□□ -0.47
TMEM258-205ENST00000540434 F11P03951 625 aa12.11□□□□□ -0.47
TMEM258-205ENST00000540434 ACO1P21399 889 aaKnown RBP12.11□□□□□ -0.47
TMEM258-205ENST00000540434 ERCC5P28715 1186 aaPredicted RBP12.11□□□□□ -0.47
TMEM258-205ENST00000540434 PXNP49023 591 aaPredicted RBP12.11□□□□□ -0.47
TMEM258-205ENST00000540434 TUFMP49411 452 aaKnown RBP12.11□□□□□ -0.47
TMEM258-205ENST00000540434 PGFP49763 221 aa12.11□□□□□ -0.47
TMEM258-205ENST00000540434 EPHB3P54753 998 aa12.11□□□□□ -0.47
TMEM258-205ENST00000540434 CYP4F8P98187 520 aa12.11□□□□□ -0.47
TMEM258-205ENST00000540434 PLD1Q13393 1074 aa12.11□□□□□ -0.47
TMEM258-205ENST00000540434 WDR44Q5JSH3 913 aa12.11□□□□□ -0.47
TMEM258-205ENST00000540434 FAM78AQ5JUQ0 283 aa12.11□□□□□ -0.47
TMEM258-205ENST00000540434 MIIPQ5JXC2 388 aa12.11□□□□□ -0.47
TMEM258-205ENST00000540434 CCDC183Q5T5S1 534 aa12.11□□□□□ -0.47
TMEM258-205ENST00000540434 CAVIN1Q6NZI2 390 aaKnown RBP12.11□□□□□ -0.47
TMEM258-205ENST00000540434 GJB7Q6PEY0 223 aa12.11□□□□□ -0.47
TMEM258-205ENST00000540434 Q6ZS52 159 aa12.11□□□□□ -0.47
TMEM258-205ENST00000540434 KBTBD6Q86V97 674 aa12.11□□□□□ -0.47
TMEM258-205ENST00000540434 SCN4BQ8IWT1 228 aa12.11□□□□□ -0.47
TMEM258-205ENST00000540434 SPEM1Q8N4L4 309 aa12.11□□□□□ -0.47
TMEM258-205ENST00000540434 SLC4A11Q8NBS3 891 aa12.11□□□□□ -0.47
TMEM258-205ENST00000540434 EHBP1Q8NDI1 1231 aa12.11□□□□□ -0.47
TMEM258-205ENST00000540434 KREMEN1Q96MU8 473 aa12.11□□□□□ -0.47
TMEM258-205ENST00000540434 SMOQ99835 787 aa12.11□□□□□ -0.47
TMEM258-205ENST00000540434 CRACR2AQ9BSW2 395 aa12.11□□□□□ -0.47
TMEM258-205ENST00000540434 HSD3B7Q9H2F3 369 aa12.11□□□□□ -0.47
TMEM258-205ENST00000540434 FAM49BQ9NUQ9 324 aa12.11□□□□□ -0.47
TMEM258-205ENST00000540434 AJAP1Q9UKB5 411 aaPredicted RBP12.11□□□□□ -0.47
TMEM258-205ENST00000540434 ANAPC1Q9H1A4 1944 aa12.11□□□□□ -0.47
TMEM258-205ENST00000540434 KIF26AQ9ULI4 1882 aaPredicted RBP12.1□□□□□ -0.47
TMEM258-205ENST00000540434 FREM2Q5SZK8 3169 aa12.1□□□□□ -0.47
TMEM258-205ENST00000540434 F8VP50 259 aa12.1□□□□□ -0.47
TMEM258-205ENST00000540434 PMM2O15305 246 aa12.1□□□□□ -0.47
TMEM258-205ENST00000540434 MBD3O95983 291 aa12.1□□□□□ -0.47
TMEM258-205ENST00000540434 AFPP02771 609 aaKnown RBP12.1□□□□□ -0.47
TMEM258-205ENST00000540434 SLC9A1P19634 815 aa12.1□□□□□ -0.47
TMEM258-205ENST00000540434 GABRR2P28476 465 aa12.1□□□□□ -0.47
TMEM258-205ENST00000540434 VIPR2P41587 438 aa12.1□□□□□ -0.47
TMEM258-205ENST00000540434 MAGEA11P43364 429 aa12.1□□□□□ -0.47
TMEM258-205ENST00000540434 RAD23BP54727 409 aa12.1□□□□□ -0.47
TMEM258-205ENST00000540434 SMARCB1Q12824 385 aa12.1□□□□□ -0.47
TMEM258-205ENST00000540434 NCAPHQ15003 741 aa12.1□□□□□ -0.47
TMEM258-205ENST00000540434 COL28A1Q2UY09 1125 aa12.1□□□□□ -0.47
TMEM258-205ENST00000540434 PLA2G2CQ5R387 149 aa12.1□□□□□ -0.47
TMEM258-205ENST00000540434 PDZD4Q76G19 769 aaPredicted RBP12.1□□□□□ -0.47
TMEM258-205ENST00000540434 RRAGAQ7L523 313 aa12.1□□□□□ -0.47
TMEM258-205ENST00000540434 ADAM32Q8TC27 787 aa12.1□□□□□ -0.47
TMEM258-205ENST00000540434 FAM200AQ8TCP9 573 aa12.1□□□□□ -0.47
TMEM258-205ENST00000540434 SLC2A14Q8TDB8 520 aa12.1□□□□□ -0.47
TMEM258-205ENST00000540434 SLC22A12Q96S37 553 aa12.1□□□□□ -0.47
TMEM258-205ENST00000540434 ZSWIM1Q9BR11 485 aa12.1□□□□□ -0.47
TMEM258-205ENST00000540434 FUCA2Q9BTY2 467 aa12.1□□□□□ -0.47
TMEM258-205ENST00000540434 SLC46A2Q9BY10 475 aa12.1□□□□□ -0.47
TMEM258-205ENST00000540434 SMG9Q9H0W8 520 aaKnown RBP12.1□□□□□ -0.47
TMEM258-205ENST00000540434 BRD9Q9H8M2 597 aa12.1□□□□□ -0.47
TMEM258-205ENST00000540434 CYP3A43Q9HB55 503 aa12.1□□□□□ -0.47
TMEM258-205ENST00000540434 ABCB6Q9NP58 842 aa12.1□□□□□ -0.47
TMEM258-205ENST00000540434 CISHQ9NSE2 258 aa12.1□□□□□ -0.47
TMEM258-205ENST00000540434 KLK13Q9UKR3 277 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms