RNA–Protein interactions for RNA: ENST00000540269.6

USP10-202, Transcript of ubiquitin specific peptidase 10, humanhuman

TSL 1 (best)

Gene USP10, Length 3,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP10-202ENST00000540269 SPON1Q9HCB6 807 aa12.94□□□□□ -0.34
USP10-202ENST00000540269 NGRNQ9NPE2 291 aaKnown RBP12.94□□□□□ -0.34
USP10-202ENST00000540269 NKIRAS1Q9NYS0 192 aa12.94□□□□□ -0.34
USP10-202ENST00000540269 XPO7Q9UIA9 1087 aaKnown RBP12.94□□□□□ -0.34
USP10-202ENST00000540269 E7ESA3 106 aa12.94□□□□□ -0.34
USP10-202ENST00000540269 GPR32O75388 356 aa12.94□□□□□ -0.34
USP10-202ENST00000540269 AKAP5P24588 427 aa12.94□□□□□ -0.34
USP10-202ENST00000540269 IGFBP6P24592 240 aaPredicted RBP12.94□□□□□ -0.34
USP10-202ENST00000540269 DNAJC3Q13217 504 aa12.94□□□□□ -0.34
USP10-202ENST00000540269 DUSP28Q4G0W2 176 aa12.94□□□□□ -0.34
USP10-202ENST00000540269 FAXCQ5TGI0 409 aa12.94□□□□□ -0.34
USP10-202ENST00000540269 C3orf62Q6ZUJ4 267 aa12.94□□□□□ -0.34
USP10-202ENST00000540269 SPATA21Q7Z572 469 aa12.94□□□□□ -0.34
USP10-202ENST00000540269 FAM228AQ86W67 206 aa12.94□□□□□ -0.34
USP10-202ENST00000540269 PLD5Q8N7P1 536 aa12.94□□□□□ -0.34
USP10-202ENST00000540269 OR6J1Q8NGC5 347 aa12.94□□□□□ -0.34
USP10-202ENST00000540269 TMEM40Q8WWA1 233 aa12.94□□□□□ -0.34
USP10-202ENST00000540269 APOL6Q9BWW8 343 aa12.94□□□□□ -0.34
USP10-202ENST00000540269 MIS12Q9H081 205 aa12.94□□□□□ -0.34
USP10-202ENST00000540269 USP29Q9HBJ7 922 aa12.94□□□□□ -0.34
USP10-202ENST00000540269 KLC4Q9NSK0 619 aa12.94□□□□□ -0.34
USP10-202ENST00000540269 CHMP2BQ9UQN3 213 aa12.94□□□□□ -0.34
USP10-202ENST00000540269 SPTLC1O15269 473 aa12.93□□□□□ -0.34
USP10-202ENST00000540269 TYROBPO43914 113 aa12.93□□□□□ -0.34
USP10-202ENST00000540269 P4HA1P13674 534 aa12.93□□□□□ -0.34
USP10-202ENST00000540269 ZBTB6Q15916 424 aa12.93□□□□□ -0.34
USP10-202ENST00000540269 DPP9Q86TI2 863 aa12.93□□□□□ -0.34
USP10-202ENST00000540269 RIBC1Q8N443 379 aaPredicted RBP12.93□□□□□ -0.34
USP10-202ENST00000540269 FITM2Q8N6M3 262 aa12.93□□□□□ -0.34
USP10-202ENST00000540269 TTC13Q8NBP0 860 aa12.93□□□□□ -0.34
USP10-202ENST00000540269 PCDH19Q8TAB3 1148 aa12.93□□□□□ -0.34
USP10-202ENST00000540269 PYROXD1Q8WU10 500 aa12.93□□□□□ -0.34
USP10-202ENST00000540269 MZB1Q8WU39 189 aa12.93□□□□□ -0.34
USP10-202ENST00000540269 FAM172AQ8WUF8 416 aa12.93□□□□□ -0.34
USP10-202ENST00000540269 SLC35F5Q8WV83 523 aa12.93□□□□□ -0.34
USP10-202ENST00000540269 SNX27Q96L92 541 aa12.93□□□□□ -0.34
USP10-202ENST00000540269 RNF157Q96PX1 679 aa12.93□□□□□ -0.34
USP10-202ENST00000540269 PTPN18Q99952 460 aa12.93□□□□□ -0.34
USP10-202ENST00000540269 NSRP1Q9H0G5 558 aaKnown RBP12.93□□□□□ -0.34
USP10-202ENST00000540269 RNF39Q9H2S5 420 aa12.93□□□□□ -0.34
USP10-202ENST00000540269 MCF2LO15068 1137 aa12.93□□□□□ -0.34
USP10-202ENST00000540269 STAU1O95793 577 aaKnown RBP12.93□□□□□ -0.34
USP10-202ENST00000540269 HOXD8P13378 290 aaPredicted RBP12.93□□□□□ -0.34
USP10-202ENST00000540269 LMO2P25791 158 aa12.93□□□□□ -0.34
USP10-202ENST00000540269 ARL4CP56559 192 aa12.93□□□□□ -0.34
USP10-202ENST00000540269 CCNA1P78396 465 aa12.93□□□□□ -0.34
USP10-202ENST00000540269 XRCC4Q13426 336 aa12.93□□□□□ -0.34
USP10-202ENST00000540269 SOWAHAQ2M3V2 549 aa12.93□□□□□ -0.34
USP10-202ENST00000540269 DARS2Q6PI48 645 aaKnown RBP12.93□□□□□ -0.34
USP10-202ENST00000540269 ARHGEF18Q6ZSZ5 1173 aa12.93□□□□□ -0.34
USP10-202ENST00000540269 RSAD1Q9HA92 442 aa12.93□□□□□ -0.34
USP10-202ENST00000540269 GOLGA2P5Q9HBQ8 144 aa12.93□□□□□ -0.34
USP10-202ENST00000540269 KLK14Q9P0G3 267 aa12.93□□□□□ -0.34
USP10-202ENST00000540269 NR2E3Q9Y5X4 410 aa12.93□□□□□ -0.34
USP10-202ENST00000540269 DOCK3Q8IZD9 2030 aa12.93□□□□□ -0.34
USP10-202ENST00000540269 GOLGA8RI6L899 631 aa12.92□□□□□ -0.34
USP10-202ENST00000540269 CCDC130P13994 396 aa12.92□□□□□ -0.34
USP10-202ENST00000540269 ELK3P41970 407 aa12.92□□□□□ -0.34
USP10-202ENST00000540269 HDAC4P56524 1084 aa12.92□□□□□ -0.34
USP10-202ENST00000540269 ZNF200P98182 395 aaPredicted RBP12.92□□□□□ -0.34
USP10-202ENST00000540269 ACVR2BQ13705 512 aa12.92□□□□□ -0.34
USP10-202ENST00000540269 GALNTL6Q49A17 601 aa12.92□□□□□ -0.34
USP10-202ENST00000540269 CYB5D1Q6P9G0 228 aa12.92□□□□□ -0.34
USP10-202ENST00000540269 C7orf31Q8N865 590 aa12.92□□□□□ -0.34
USP10-202ENST00000540269 UPF1Q92900 1129 aaKnown RBP eCLIP12.92□□□□□ -0.34
USP10-202ENST00000540269 PAFAH2Q99487 392 aa12.92□□□□□ -0.34
USP10-202ENST00000540269 SNRNP25Q9BV90 132 aaKnown RBP12.92□□□□□ -0.34
USP10-202ENST00000540269 SLC4A5Q9BY07 1137 aa12.92□□□□□ -0.34
USP10-202ENST00000540269 PCDH18Q9HCL0 1135 aa12.92□□□□□ -0.34
USP10-202ENST00000540269 CD248Q9HCU0 757 aa12.92□□□□□ -0.34
USP10-202ENST00000540269 PRPSAP2O60256 369 aa12.92□□□□□ -0.34
USP10-202ENST00000540269 DNAJC8O75937 253 aaPredicted RBP12.92□□□□□ -0.34
USP10-202ENST00000540269 PDGFRBP09619 1106 aa12.92□□□□□ -0.34
USP10-202ENST00000540269 NCALDP61601 193 aa12.92□□□□□ -0.34
USP10-202ENST00000540269 ROR1Q01973 937 aa12.92□□□□□ -0.34
USP10-202ENST00000540269 ACAP1Q15027 740 aa12.92□□□□□ -0.34
USP10-202ENST00000540269 DPY19L2Q6NUT2 758 aa12.92□□□□□ -0.34
USP10-202ENST00000540269 CATSPER4Q7RTX7 472 aa12.92□□□□□ -0.34
USP10-202ENST00000540269 ECHDC2Q86YB7 292 aa12.92□□□□□ -0.34
USP10-202ENST00000540269 TRIM56Q9BRZ2 755 aaKnown RBP12.92□□□□□ -0.34
USP10-202ENST00000540269 TINF2Q9BSI4 451 aa12.92□□□□□ -0.34
USP10-202ENST00000540269 DHRS4Q9BTZ2 278 aa12.92□□□□□ -0.34
USP10-202ENST00000540269 YY1AP1Q9H869 796 aa12.92□□□□□ -0.34
USP10-202ENST00000540269 PLAC1Q9HBJ0 212 aa12.92□□□□□ -0.34
USP10-202ENST00000540269 PSMC3IPQ9P2W1 217 aaPredicted RBP12.92□□□□□ -0.34
USP10-202ENST00000540269 MORF4L1Q9UBU8 362 aa12.92□□□□□ -0.34
USP10-202ENST00000540269 TRIM33Q9UPN9 1127 aa12.92□□□□□ -0.34
USP10-202ENST00000540269 MFHAS1Q9Y4C4 1052 aa12.92□□□□□ -0.34
USP10-202ENST00000540269 HEY1Q9Y5J3 304 aa12.92□□□□□ -0.34
USP10-202ENST00000540269 PRPF4O43172 522 aaKnown RBP eCLIP12.92□□□□□ -0.348e-11■■□□□ 14.2
USP10-202ENST00000540269 DYNC1LI2O43237 492 aaPredicted RBP12.92□□□□□ -0.34
USP10-202ENST00000540269 RECQL4O94761 1208 aa12.92□□□□□ -0.34
USP10-202ENST00000540269 KRT4P19013 534 aa12.92□□□□□ -0.34
USP10-202ENST00000540269 RBL1P28749 1068 aa12.92□□□□□ -0.34
USP10-202ENST00000540269 GRB14Q14449 540 aa12.92□□□□□ -0.34
USP10-202ENST00000540269 KCNJ11Q14654 390 aa12.92□□□□□ -0.34
USP10-202ENST00000540269 MTFR1Q15390 333 aa12.92□□□□□ -0.34
USP10-202ENST00000540269 DCAKDQ8WVC6 231 aa12.92□□□□□ -0.34
USP10-202ENST00000540269 KBTBD7Q8WVZ9 684 aa12.92□□□□□ -0.34
USP10-202ENST00000540269 NDRG1Q92597 394 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 1535.8 ms