RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 STRIP2Q9ULQ0 834 aa14.26□□□□□ -0.13
BNIP3-202ENST00000540159 DRG1Q9Y295 367 aaKnown RBP14.26□□□□□ -0.13
BNIP3-202ENST00000540159 SNX9Q9Y5X1 595 aa14.26□□□□□ -0.13
BNIP3-202ENST00000540159 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.25□□□□□ -0.13
BNIP3-202ENST00000540159 PRPSAP2O60256 369 aa14.25□□□□□ -0.13
BNIP3-202ENST00000540159 TRUB2O95900 331 aaKnown RBP14.25□□□□□ -0.13
BNIP3-202ENST00000540159 CYP2C8P10632 490 aa14.25□□□□□ -0.13
BNIP3-202ENST00000540159 PHBP35232 272 aa14.25□□□□□ -0.13
BNIP3-202ENST00000540159 RABGGTBP53611 331 aa14.25□□□□□ -0.13
BNIP3-202ENST00000540159 EFHC2Q5JST6 749 aa14.25□□□□□ -0.13
BNIP3-202ENST00000540159 APOBEC3FQ8IUX4 373 aaKnown RBP14.25□□□□□ -0.13
BNIP3-202ENST00000540159 DCAKDQ8WVC6 231 aa14.25□□□□□ -0.13
BNIP3-202ENST00000540159 ZNF570Q96NI8 536 aa14.25□□□□□ -0.13
BNIP3-202ENST00000540159 FAM49AQ9H0Q0 323 aaPredicted RBP14.25□□□□□ -0.13
BNIP3-202ENST00000540159 C15orf41Q9Y2V0 281 aa14.25□□□□□ -0.13
BNIP3-202ENST00000540159 ALDH3A1P30838 453 aa14.25□□□□□ -0.13
BNIP3-202ENST00000540159 MBTD1Q05BQ5 628 aa14.25□□□□□ -0.13
BNIP3-202ENST00000540159 NBPF20Q3BBV1 942 aa14.25□□□□□ -0.13
BNIP3-202ENST00000540159 MROH9Q5TGP6 573 aa14.25□□□□□ -0.13
BNIP3-202ENST00000540159 DTX3LQ8TDB6 740 aa14.25□□□□□ -0.13
BNIP3-202ENST00000540159 MANSC1Q9H8J5 431 aa14.25□□□□□ -0.13
BNIP3-202ENST00000540159 SMG5Q9UPR3 1016 aaKnown RBP14.25□□□□□ -0.13
BNIP3-202ENST00000540159 STARD13Q9Y3M8 1113 aa14.25□□□□□ -0.13
BNIP3-202ENST00000540159 SSC5DA1L4H1 1573 aa14.25□□□□□ -0.13
BNIP3-202ENST00000540159 PARP14Q460N5 1801 aa14.24□□□□□ -0.13
BNIP3-202ENST00000540159 FAM237BA0A1B0GVD1 139 aa14.24□□□□□ -0.13
BNIP3-202ENST00000540159 TRIM49D1C9J1S8 452 aa14.24□□□□□ -0.13
BNIP3-202ENST00000540159 GPD2P43304 727 aa14.24□□□□□ -0.13
BNIP3-202ENST00000540159 LRRC38Q5VT99 294 aa14.24□□□□□ -0.13
BNIP3-202ENST00000540159 PMF1Q6P1K2 205 aa14.24□□□□□ -0.13
BNIP3-202ENST00000540159 MPP5Q8N3R9 675 aa14.24□□□□□ -0.13
BNIP3-202ENST00000540159 FAM13CQ8NE31 585 aa14.24□□□□□ -0.13
BNIP3-202ENST00000540159 ACAP3Q96P50 834 aa14.24□□□□□ -0.13
BNIP3-202ENST00000540159 TMPRSS4Q9NRS4 437 aa14.24□□□□□ -0.13
BNIP3-202ENST00000540159 NOP53Q9NZM5 478 aaKnown RBP14.24□□□□□ -0.13
BNIP3-202ENST00000540159 KCNG1Q9UIX4 513 aa14.24□□□□□ -0.13
BNIP3-202ENST00000540159 PRPF4O43172 522 aaKnown RBP eCLIP14.24□□□□□ -0.139e-14■■□□□ 13.3
BNIP3-202ENST00000540159 ARF4P18085 180 aaPredicted RBP14.24□□□□□ -0.13
BNIP3-202ENST00000540159 RCN2Q14257 317 aa14.24□□□□□ -0.13
BNIP3-202ENST00000540159 SLC10A6Q3KNW5 377 aa14.24□□□□□ -0.13
BNIP3-202ENST00000540159 CELF3Q5SZQ8 465 aaKnown RBP14.24□□□□□ -0.13
BNIP3-202ENST00000540159 PPP1R26Q5T8A7 1209 aaPredicted RBP14.24□□□□□ -0.13
BNIP3-202ENST00000540159 FYB2Q5VWT5 728 aa14.24□□□□□ -0.13
BNIP3-202ENST00000540159 CASC4Q6P4E1 433 aa14.24□□□□□ -0.13
BNIP3-202ENST00000540159 TRMT10BQ6PF06 316 aaKnown RBP14.24□□□□□ -0.13
BNIP3-202ENST00000540159 RIBC1Q8N443 379 aaPredicted RBP14.24□□□□□ -0.13
BNIP3-202ENST00000540159 ARMC2Q8NEN0 867 aa14.24□□□□□ -0.13
BNIP3-202ENST00000540159 SLC7A6OSQ96CW6 309 aaPredicted RBP14.24□□□□□ -0.13
BNIP3-202ENST00000540159 KIF12Q96FN5 646 aa14.24□□□□□ -0.13
BNIP3-202ENST00000540159 L3MBTL3Q96JM7 780 aaPredicted RBP14.24□□□□□ -0.13
BNIP3-202ENST00000540159 IQCGQ9H095 443 aaKnown RBP14.24□□□□□ -0.13
BNIP3-202ENST00000540159 ACSS3Q9H6R3 686 aa14.24□□□□□ -0.13
BNIP3-202ENST00000540159 IFT122Q9HBG6 1241 aa14.24□□□□□ -0.13
BNIP3-202ENST00000540159 GPRC5DQ9NZD1 345 aa14.24□□□□□ -0.13
BNIP3-202ENST00000540159 KANSL3Q9P2N6 904 aa14.24□□□□□ -0.13
BNIP3-202ENST00000540159 PCDHGC3Q9UN70 934 aa14.24□□□□□ -0.13
BNIP3-202ENST00000540159 ACTL7BQ9Y614 415 aa14.24□□□□□ -0.13
BNIP3-202ENST00000540159 APOC4-APOC2K7ER74 178 aa14.23□□□□□ -0.13
BNIP3-202ENST00000540159 FZD9O00144 591 aa14.23□□□□□ -0.13
BNIP3-202ENST00000540159 MED7O43513 233 aa14.23□□□□□ -0.13
BNIP3-202ENST00000540159 APOC2P02655 101 aa14.23□□□□□ -0.13
BNIP3-202ENST00000540159 PDHA1P08559 390 aa14.23□□□□□ -0.13
BNIP3-202ENST00000540159 ATP2A2P16615 1042 aaKnown RBP14.23□□□□□ -0.13
BNIP3-202ENST00000540159 ADORA2BP29275 332 aa14.23□□□□□ -0.13
BNIP3-202ENST00000540159 KCTD2Q14681 263 aa14.23□□□□□ -0.13
BNIP3-202ENST00000540159 KIZQ2M2Z5 673 aa14.23□□□□□ -0.13
BNIP3-202ENST00000540159 GOLGA7BQ2TAP0 167 aa14.23□□□□□ -0.13
BNIP3-202ENST00000540159 DRICH1Q6PGQ1 229 aaPredicted RBP14.23□□□□□ -0.13
BNIP3-202ENST00000540159 ALYREFQ86V81 257 aaKnown RBP14.23□□□□□ -0.13
BNIP3-202ENST00000540159 RELL1Q8IUW5 271 aa14.23□□□□□ -0.13
BNIP3-202ENST00000540159 FAM172AQ8WUF8 416 aa14.23□□□□□ -0.13
BNIP3-202ENST00000540159 RSRC1Q96IZ7 334 aaKnown RBP14.23□□□□□ -0.13
BNIP3-202ENST00000540159 NUDCD1Q96RS6 583 aa14.23□□□□□ -0.13
BNIP3-202ENST00000540159 TSSK1BQ9BXA7 367 aa14.23□□□□□ -0.13
BNIP3-202ENST00000540159 TXLNGQ9NUQ3 528 aa14.23□□□□□ -0.13
BNIP3-202ENST00000540159 ARL8BQ9NVJ2 186 aa14.23□□□□□ -0.13
BNIP3-202ENST00000540159 DOCK1Q14185 1865 aa14.23□□□□□ -0.13
BNIP3-202ENST00000540159 SOCS7O14512 581 aa14.23□□□□□ -0.13
BNIP3-202ENST00000540159 CILPO75339 1184 aa14.23□□□□□ -0.13
BNIP3-202ENST00000540159 NPTXRO95502 500 aa14.23□□□□□ -0.13
BNIP3-202ENST00000540159 ZBED1O96006 694 aa14.23□□□□□ -0.13
BNIP3-202ENST00000540159 YARSP54577 528 aaKnown RBP14.23□□□□□ -0.13
BNIP3-202ENST00000540159 BCAR1P56945 870 aa14.23□□□□□ -0.13
BNIP3-202ENST00000540159 ZNF200P98182 395 aaPredicted RBP14.23□□□□□ -0.13
BNIP3-202ENST00000540159 R3HDM1Q15032 1099 aaKnown RBP14.23□□□□□ -0.13
BNIP3-202ENST00000540159 ANKRD20A2Q5SQ80 823 aa14.23□□□□□ -0.13
BNIP3-202ENST00000540159 ANKRD20A1Q5TYW2 823 aa14.23□□□□□ -0.13
BNIP3-202ENST00000540159 ANKRD20A3Q5VUR7 823 aa14.23□□□□□ -0.13
BNIP3-202ENST00000540159 TSHZ1Q6ZSZ6 1077 aa14.23□□□□□ -0.13
BNIP3-202ENST00000540159 APBB1IPQ7Z5R6 666 aaPredicted RBP14.23□□□□□ -0.13
BNIP3-202ENST00000540159 RIOX2Q8IUF8 465 aa14.23□□□□□ -0.13
BNIP3-202ENST00000540159 FGD4Q96M96 766 aa14.23□□□□□ -0.13
BNIP3-202ENST00000540159 ZNF518BQ9C0D4 1074 aa14.23□□□□□ -0.13
BNIP3-202ENST00000540159 PCMTD2Q9NV79 361 aa14.23□□□□□ -0.13
BNIP3-202ENST00000540159 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.23□□□□□ -0.13
BNIP3-202ENST00000540159 LCP1P13796 627 aa14.23□□□□□ -0.13
BNIP3-202ENST00000540159 GPD1P21695 349 aa14.23□□□□□ -0.13
BNIP3-202ENST00000540159 PAX7P23759 505 aa14.23□□□□□ -0.13
BNIP3-202ENST00000540159 GBE1Q04446 702 aa14.23□□□□□ -0.13
BNIP3-202ENST00000540159 CDCA2Q69YH5 1023 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms