RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 NETO2Q8NC67 525 aa13.47□□□□□ -0.25
MSH6-210ENST00000540021 JOSD2Q8TAC2 188 aa13.47□□□□□ -0.25
MSH6-210ENST00000540021 GDPD5Q8WTR4 605 aa13.47□□□□□ -0.25
MSH6-210ENST00000540021 PGBD4Q96DM1 585 aa13.47□□□□□ -0.25
MSH6-210ENST00000540021 TMA16Q96EY4 203 aaKnown RBP13.47□□□□□ -0.25
MSH6-210ENST00000540021 MIPEPQ99797 713 aa13.47□□□□□ -0.25
MSH6-210ENST00000540021 USP18Q9UMW8 372 aa13.47□□□□□ -0.25
MSH6-210ENST00000540021 SOX13Q9UN79 622 aa13.47□□□□□ -0.25
MSH6-210ENST00000540021 ZACNQ401N2 412 aa13.46□□□□□ -0.25
MSH6-210ENST00000540021 TMCO4Q5TGY1 634 aa13.46□□□□□ -0.25
MSH6-210ENST00000540021 PRAMEF18Q5VWM3 479 aa13.46□□□□□ -0.25
MSH6-210ENST00000540021 ZNF354CQ86Y25 554 aa13.46□□□□□ -0.25
MSH6-210ENST00000540021 NLRP7Q8WX94 980 aa13.46□□□□□ -0.25
MSH6-210ENST00000540021 FAM49BQ9NUQ9 324 aa13.46□□□□□ -0.25
MSH6-210ENST00000540021 APBA3O96018 575 aa13.46□□□□□ -0.25
MSH6-210ENST00000540021 ABCG1P45844 678 aa13.46□□□□□ -0.25
MSH6-210ENST00000540021 NUDT2P50583 147 aa13.46□□□□□ -0.25
MSH6-210ENST00000540021 MOGSQ13724 837 aa13.46□□□□□ -0.25
MSH6-210ENST00000540021 FASTKD1Q53R41 847 aaKnown RBP13.46□□□□□ -0.25
MSH6-210ENST00000540021 CES3Q6UWW8 571 aa13.46□□□□□ -0.25
MSH6-210ENST00000540021 NCAPG2Q86XI2 1143 aa13.46□□□□□ -0.25
MSH6-210ENST00000540021 MPP4Q96JB8 637 aa13.46□□□□□ -0.25
MSH6-210ENST00000540021 RSAD1Q9HA92 442 aa13.46□□□□□ -0.25
MSH6-210ENST00000540021 MAN1C1Q9NR34 630 aa13.46□□□□□ -0.25
MSH6-210ENST00000540021 PAK5Q9P286 719 aa13.46□□□□□ -0.25
MSH6-210ENST00000540021 POLIQ9UNA4 740 aa13.46□□□□□ -0.25
MSH6-210ENST00000540021 ZNF711Q9Y462 761 aa13.46□□□□□ -0.25
MSH6-210ENST00000540021 DTNAQ9Y4J8 743 aa13.46□□□□□ -0.25
MSH6-210ENST00000540021 ATP8B3O60423 1300 aa13.46□□□□□ -0.25
MSH6-210ENST00000540021 XPO1O14980 1071 aaKnown RBP13.46□□□□□ -0.26
MSH6-210ENST00000540021 DCXO43602 365 aa13.46□□□□□ -0.26
MSH6-210ENST00000540021 CCNE2O96020 404 aa13.46□□□□□ -0.26
MSH6-210ENST00000540021 FESP07332 822 aa13.46□□□□□ -0.26
MSH6-210ENST00000540021 HNRNPCP07910 306 aaKnown RBP eCLIP13.46□□□□□ -0.26
MSH6-210ENST00000540021 LYNP07948 512 aa13.46□□□□□ -0.26
MSH6-210ENST00000540021 T-ENOLP0DO92 83 aa13.46□□□□□ -0.26
MSH6-210ENST00000540021 MIPP30301 263 aa13.46□□□□□ -0.26
MSH6-210ENST00000540021 CAP2P40123 477 aa13.46□□□□□ -0.26
MSH6-210ENST00000540021 DENND1BQ6P3S1 775 aa13.46□□□□□ -0.26
MSH6-210ENST00000540021 ECSITQ9BQ95 431 aa13.46□□□□□ -0.26
MSH6-210ENST00000540021 IDI2Q9BXS1 227 aa13.46□□□□□ -0.26
MSH6-210ENST00000540021 NUF2Q9BZD4 464 aa13.46□□□□□ -0.26
MSH6-210ENST00000540021 ASCC2Q9H1I8 757 aaPredicted RBP13.46□□□□□ -0.26
MSH6-210ENST00000540021 STX18Q9P2W9 335 aaKnown RBP13.46□□□□□ -0.26
MSH6-210ENST00000540021 COL18A1P39060 1754 aa13.46□□□□□ -0.26
MSH6-210ENST00000540021 PLCH1Q4KWH8 1693 aa13.46□□□□□ -0.26
MSH6-210ENST00000540021 A8MXQ7 604 aa13.45□□□□□ -0.26
MSH6-210ENST00000540021 RAG1P15918 1043 aa13.45□□□□□ -0.26
MSH6-210ENST00000540021 GPX6P59796 221 aa13.45□□□□□ -0.26
MSH6-210ENST00000540021 TAF5Q15542 800 aa13.45□□□□□ -0.26
MSH6-210ENST00000540021 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.45□□□□□ -0.262e-7■■■■□ 25.1
MSH6-210ENST00000540021 PPP2R3CQ969Q6 453 aa13.45□□□□□ -0.26
MSH6-210ENST00000540021 PHACTR1Q9C0D0 580 aa13.45□□□□□ -0.26
MSH6-210ENST00000540021 SLC38A10Q9HBR0 1119 aa13.45□□□□□ -0.26
MSH6-210ENST00000540021 TMEM191CA6NGB0 347 aa13.45□□□□□ -0.26
MSH6-210ENST00000540021 CASQ2O14958 399 aaPredicted RBP13.45□□□□□ -0.26
MSH6-210ENST00000540021 ATP9BO43861 1147 aa13.45□□□□□ -0.26
MSH6-210ENST00000540021 TMEM63AO94886 807 aa13.45□□□□□ -0.26
MSH6-210ENST00000540021 KDELR1P24390 212 aa13.45□□□□□ -0.26
MSH6-210ENST00000540021 KLRC2P26717 231 aa13.45□□□□□ -0.26
MSH6-210ENST00000540021 TNFSF9P41273 254 aa13.45□□□□□ -0.26
MSH6-210ENST00000540021 MRPS9P82933 396 aaKnown RBP13.45□□□□□ -0.26
MSH6-210ENST00000540021 C15orf59Q2T9L4 293 aaPredicted RBP13.45□□□□□ -0.26
MSH6-210ENST00000540021 PLEKHG4Q58EX7 1191 aa13.45□□□□□ -0.26
MSH6-210ENST00000540021 TATDN1Q6P1N9 297 aa13.45□□□□□ -0.26
MSH6-210ENST00000540021 NIM1KQ8IY84 436 aa13.45□□□□□ -0.26
MSH6-210ENST00000540021 SLCO2A1Q92959 643 aa13.45□□□□□ -0.26
MSH6-210ENST00000540021 USP13Q92995 863 aaPredicted RBP13.45□□□□□ -0.26
MSH6-210ENST00000540021 CDHR1Q96JP9 859 aa13.45□□□□□ -0.26
MSH6-210ENST00000540021 MRPL4Q9BYD3 311 aaKnown RBP13.45□□□□□ -0.26
MSH6-210ENST00000540021 KLHL4Q9C0H6 718 aa13.45□□□□□ -0.26
MSH6-210ENST00000540021 TRPV6Q9H1D0 765 aa13.45□□□□□ -0.26
MSH6-210ENST00000540021 APOBEC3GQ9HC16 384 aaKnown RBP13.45□□□□□ -0.26
MSH6-210ENST00000540021 ACSS2Q9NR19 701 aa13.45□□□□□ -0.26
MSH6-210ENST00000540021 TCEA3O75764 348 aa13.45□□□□□ -0.26
MSH6-210ENST00000540021 RBL1P28749 1068 aa13.45□□□□□ -0.26
MSH6-210ENST00000540021 SOX11P35716 441 aa13.45□□□□□ -0.26
MSH6-210ENST00000540021 ARL4AP40617 200 aa13.45□□□□□ -0.26
MSH6-210ENST00000540021 NCKAP1LP55160 1127 aa13.45□□□□□ -0.26
MSH6-210ENST00000540021 PRAMEP78395 509 aa13.45□□□□□ -0.26
MSH6-210ENST00000540021 FSCBQ5H9T9 825 aa13.45□□□□□ -0.26
MSH6-210ENST00000540021 EFHC2Q5JST6 749 aa13.45□□□□□ -0.26
MSH6-210ENST00000540021 DACT2Q5SW24 774 aa13.45□□□□□ -0.26
MSH6-210ENST00000540021 CCDC60Q8IWA6 550 aaPredicted RBP13.45□□□□□ -0.26
MSH6-210ENST00000540021 MCUQ8NE86 351 aa13.45□□□□□ -0.26
MSH6-210ENST00000540021 ZNF516Q92618 1163 aa13.45□□□□□ -0.26
MSH6-210ENST00000540021 OPTNQ96CV9 577 aa13.45□□□□□ -0.26
MSH6-210ENST00000540021 SERPINI1Q99574 410 aa13.45□□□□□ -0.26
MSH6-210ENST00000540021 TLK1Q9UKI8 766 aa13.45□□□□□ -0.26
MSH6-210ENST00000540021 A0A1B0GUL6 1792 aa13.45□□□□□ -0.26
MSH6-210ENST00000540021 CST3P01034 146 aaPredicted RBP13.45□□□□□ -0.26
MSH6-210ENST00000540021 ITGAVP06756 1048 aa13.45□□□□□ -0.26
MSH6-210ENST00000540021 MX2P20592 715 aa13.45□□□□□ -0.26
MSH6-210ENST00000540021 IFRD2Q12894 506 aaPredicted RBP13.45□□□□□ -0.26
MSH6-210ENST00000540021 RARS2Q5T160 578 aaKnown RBP13.45□□□□□ -0.26
MSH6-210ENST00000540021 N4BP2L1Q5TBK1 243 aaPredicted RBP13.45□□□□□ -0.26
MSH6-210ENST00000540021 IL31Q6EBC2 164 aa13.45□□□□□ -0.26
MSH6-210ENST00000540021 DDX1Q92499 740 aaKnown RBP13.45□□□□□ -0.26
MSH6-210ENST00000540021 RNF34Q969K3 372 aa13.45□□□□□ -0.26
MSH6-210ENST00000540021 VCPIP1Q96JH7 1222 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms