RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 HOMER3Q9NSC5 361 aa17.68■□□□□ 0.42
COPS3-212ENST00000539941 DNAJB4Q9UDY4 337 aa17.68■□□□□ 0.42
COPS3-212ENST00000539941 NR2E1Q9Y466 385 aa17.68■□□□□ 0.42
COPS3-212ENST00000539941 HSF2BPO75031 334 aa17.67■□□□□ 0.42
COPS3-212ENST00000539941 HEXIM1O94992 359 aaKnown RBP17.67■□□□□ 0.42
COPS3-212ENST00000539941 KRT1P04264 644 aa17.67■□□□□ 0.42
COPS3-212ENST00000539941 ALDH2P05091 517 aa17.67■□□□□ 0.42
COPS3-212ENST00000539941 GLI1P08151 1106 aa17.67■□□□□ 0.42
COPS3-212ENST00000539941 TCF4P15884 667 aa17.67■□□□□ 0.42
COPS3-212ENST00000539941 GJC1P36383 396 aa17.67■□□□□ 0.42
COPS3-212ENST00000539941 FNTAP49354 379 aa17.67■□□□□ 0.42
COPS3-212ENST00000539941 ADIGQ0VDE8 80 aa17.67■□□□□ 0.42
COPS3-212ENST00000539941 ELAVL2Q12926 359 aaKnown RBP17.67■□□□□ 0.42
COPS3-212ENST00000539941 SIX1Q15475 284 aaPredicted RBP17.67■□□□□ 0.42
COPS3-212ENST00000539941 C4orf50Q6ZRC1 276 aa17.67■□□□□ 0.42
COPS3-212ENST00000539941 SIX6OS1Q8N1H7 587 aa17.67■□□□□ 0.42
COPS3-212ENST00000539941 LRRC43Q8N309 656 aa17.67■□□□□ 0.42
COPS3-212ENST00000539941 OR10T2Q8NGX3 314 aa17.67■□□□□ 0.42
COPS3-212ENST00000539941 SLITRK1Q96PX8 696 aa17.67■□□□□ 0.42
COPS3-212ENST00000539941 SMOQ99835 787 aa17.67■□□□□ 0.42
COPS3-212ENST00000539941 OSBPL8Q9BZF1 889 aa17.67■□□□□ 0.42
COPS3-212ENST00000539941 GDF3Q9NR23 364 aa17.67■□□□□ 0.42
COPS3-212ENST00000539941 PCYOX1Q9UHG3 505 aa17.67■□□□□ 0.42
COPS3-212ENST00000539941 ADAM28Q9UKQ2 775 aa17.67■□□□□ 0.42
COPS3-212ENST00000539941 EFR3BQ9Y2G0 817 aa17.67■□□□□ 0.42
COPS3-212ENST00000539941 PRG3Q9Y2Y8 225 aaPredicted RBP17.67■□□□□ 0.42
COPS3-212ENST00000539941 F8W810 466 aa17.67■□□□□ 0.42
COPS3-212ENST00000539941 NRP1O14786 923 aa17.67■□□□□ 0.42
COPS3-212ENST00000539941 RARAP10276 462 aa17.67■□□□□ 0.42
COPS3-212ENST00000539941 MIPP30301 263 aa17.67■□□□□ 0.42
COPS3-212ENST00000539941 MAP3K7CLP57077 242 aa17.67■□□□□ 0.42
COPS3-212ENST00000539941 SLC7A5Q01650 507 aa17.67■□□□□ 0.42
COPS3-212ENST00000539941 KLF1Q13351 362 aaPredicted RBP17.67■□□□□ 0.42
COPS3-212ENST00000539941 LRRC26Q2I0M4 334 aa17.67■□□□□ 0.42
COPS3-212ENST00000539941 CCDC14Q49A88 953 aa17.67■□□□□ 0.42
COPS3-212ENST00000539941 RAB41Q5JT25 222 aa17.67■□□□□ 0.42
COPS3-212ENST00000539941 ZFYVE27Q5T4F4 411 aa17.67■□□□□ 0.42
COPS3-212ENST00000539941 TRNP1Q6NT89 227 aa17.67■□□□□ 0.42
COPS3-212ENST00000539941 CCNI2Q6ZMN8 369 aaPredicted RBP17.67■□□□□ 0.42
COPS3-212ENST00000539941 ADAT2Q7Z6V5 191 aaKnown RBP17.67■□□□□ 0.42
COPS3-212ENST00000539941 EIF1ADQ8N9N8 165 aaKnown RBP17.67■□□□□ 0.42
COPS3-212ENST00000539941 LRRC19Q9H756 370 aa17.67■□□□□ 0.42
COPS3-212ENST00000539941 PNPLA8Q9NP80 782 aa17.67■□□□□ 0.42
COPS3-212ENST00000539941 USP18Q9UMW8 372 aa17.67■□□□□ 0.42
COPS3-212ENST00000539941 FAN1Q9Y2M0 1017 aa17.67■□□□□ 0.42
COPS3-212ENST00000539941 NR2E3Q9Y5X4 410 aa17.67■□□□□ 0.42
COPS3-212ENST00000539941 FNDC1Q4ZHG4 1894 aaPredicted RBP17.67■□□□□ 0.42
COPS3-212ENST00000539941 RANBP2P49792 3224 aaKnown RBP17.67■□□□□ 0.42
COPS3-212ENST00000539941 ABHD14A-ACY1A0A1B0GW23 586 aa17.66■□□□□ 0.42
COPS3-212ENST00000539941 FAM187AA6NFU0 413 aa17.66■□□□□ 0.42
COPS3-212ENST00000539941 TBKBP1A7MCY6 615 aa17.66■□□□□ 0.42
COPS3-212ENST00000539941 GRAP2O75791 330 aa17.66■□□□□ 0.42
COPS3-212ENST00000539941 BEST1O76090 585 aa17.66■□□□□ 0.42
COPS3-212ENST00000539941 TRUB2O95900 331 aaKnown RBP17.66■□□□□ 0.42
COPS3-212ENST00000539941 RALAP11233 206 aa17.66■□□□□ 0.42
COPS3-212ENST00000539941 GATMP50440 423 aa17.66■□□□□ 0.42
COPS3-212ENST00000539941 MRPS5P82675 430 aaKnown RBP17.66■□□□□ 0.42
COPS3-212ENST00000539941 ADCY1Q08828 1119 aa17.66■□□□□ 0.42
COPS3-212ENST00000539941 TAF5Q15542 800 aa17.66■□□□□ 0.42
COPS3-212ENST00000539941 SPOCD1Q6ZMY3 1216 aa17.66■□□□□ 0.42
COPS3-212ENST00000539941 DCP1BQ8IZD4 617 aaKnown RBP17.66■□□□□ 0.42
COPS3-212ENST00000539941 ZDHHC14Q8IZN3 488 aa17.66■□□□□ 0.42
COPS3-212ENST00000539941 MAGOHBQ96A72 148 aaKnown RBP17.66■□□□□ 0.42
COPS3-212ENST00000539941 TBCBQ99426 244 aa17.66■□□□□ 0.42
COPS3-212ENST00000539941 DDX23Q9BUQ8 820 aaKnown RBP17.66■□□□□ 0.42
COPS3-212ENST00000539941 FUT8Q9BYC5 575 aa17.66■□□□□ 0.42
COPS3-212ENST00000539941 DMAP1Q9NPF5 467 aaPredicted RBP17.66■□□□□ 0.42
COPS3-212ENST00000539941 CNGB3Q9NQW8 809 aa17.66■□□□□ 0.42
COPS3-212ENST00000539941 BCCIPQ9P287 314 aaKnown RBP eCLIP17.66■□□□□ 0.42
COPS3-212ENST00000539941 AMACRQ9UHK6 382 aa17.66■□□□□ 0.42
COPS3-212ENST00000539941 SF3B1O75533 1304 aaKnown RBP eCLIP17.65■□□□□ 0.423e-6■■■■■ 137.9
COPS3-212ENST00000539941 TCRBV7S2A1N4TA0A589 114 aa17.65■□□□□ 0.42
COPS3-212ENST00000539941 BHMG1C9JSJ3 638 aaPredicted RBP17.65■□□□□ 0.42
COPS3-212ENST00000539941 MAP2K7O14733 419 aa17.65■□□□□ 0.42
COPS3-212ENST00000539941 KIAA0355O15063 1070 aa17.65■□□□□ 0.42
COPS3-212ENST00000539941 EFCAB14O75071 495 aa17.65■□□□□ 0.42
COPS3-212ENST00000539941 DAB1O75553 588 aa17.65■□□□□ 0.42
COPS3-212ENST00000539941 TIMP1P01033 207 aa17.65■□□□□ 0.42
COPS3-212ENST00000539941 IL1R2P27930 398 aa17.65■□□□□ 0.42
COPS3-212ENST00000539941 SLC11A1P49279 550 aa17.65■□□□□ 0.42
COPS3-212ENST00000539941 TKTL1P51854 596 aa17.65■□□□□ 0.42
COPS3-212ENST00000539941 ATP13A4Q4VNC1 1196 aa17.65■□□□□ 0.42
COPS3-212ENST00000539941 TFDP3Q5H9I0 405 aa17.65■□□□□ 0.42
COPS3-212ENST00000539941 BEND6Q5SZJ8 279 aaPredicted RBP17.65■□□□□ 0.42
COPS3-212ENST00000539941 SCML4Q8N228 414 aa17.65■□□□□ 0.42
COPS3-212ENST00000539941 ZMIZ2Q8NF64 920 aa17.65■□□□□ 0.42
COPS3-212ENST00000539941 CMASQ8NFW8 434 aaPredicted RBP17.65■□□□□ 0.42
COPS3-212ENST00000539941 CLEC4CQ8WTT0 213 aa17.65■□□□□ 0.42
COPS3-212ENST00000539941 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.65■□□□□ 0.42
COPS3-212ENST00000539941 CENPIQ92674 756 aaPredicted RBP17.65■□□□□ 0.42
COPS3-212ENST00000539941 RNF25Q96BH1 459 aaPredicted RBP17.65■□□□□ 0.42
COPS3-212ENST00000539941 C11orf84Q9BUA3 381 aaPredicted RBP17.65■□□□□ 0.42
COPS3-212ENST00000539941 ZCWPW1Q9H0M4 648 aa17.65■□□□□ 0.42
COPS3-212ENST00000539941 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.65■□□□□ 0.42
COPS3-212ENST00000539941 RASAL2Q9UJF2 1139 aa17.65■□□□□ 0.42
COPS3-212ENST00000539941 PTPRDP23468 1912 aa17.65■□□□□ 0.42
COPS3-212ENST00000539941 LTBP2Q14767 1821 aa17.65■□□□□ 0.42
COPS3-212ENST00000539941 LRRD1A4D1F6 860 aa17.64■□□□□ 0.42
COPS3-212ENST00000539941 PRPSAP2O60256 369 aa17.64■□□□□ 0.42
COPS3-212ENST00000539941 TJP3O95049 919 aa17.64■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms