RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 EFR3BQ9Y2G0 817 aa12.36□□□□□ -0.43
VTN-202ENST00000539746 PCDHA3Q9Y5H8 950 aa12.36□□□□□ -0.43
VTN-202ENST00000539746 CDY1Q9Y6F8 540 aa12.36□□□□□ -0.43
VTN-202ENST00000539746 RCCD1A6NED2 376 aa12.35□□□□□ -0.43
VTN-202ENST00000539746 SOBPA7XYQ1 873 aa12.35□□□□□ -0.43
VTN-202ENST00000539746 I3L4J1 428 aa12.35□□□□□ -0.43
VTN-202ENST00000539746 KCNK3O14649 394 aa12.35□□□□□ -0.43
VTN-202ENST00000539746 TBC1D4O60343 1298 aa12.35□□□□□ -0.43
VTN-202ENST00000539746 ZRANB2O95218 330 aaKnown RBP eCLIP12.35□□□□□ -0.43
VTN-202ENST00000539746 SLU7O95391 586 aaKnown RBP12.35□□□□□ -0.43
VTN-202ENST00000539746 EFEMP2O95967 443 aa12.35□□□□□ -0.43
VTN-202ENST00000539746 LTFP02788 710 aa12.35□□□□□ -0.43
VTN-202ENST00000539746 LCP1P13796 627 aa12.35□□□□□ -0.43
VTN-202ENST00000539746 ZFXP17010 805 aaPredicted RBP12.35□□□□□ -0.43
VTN-202ENST00000539746 COMTP21964 271 aa12.35□□□□□ -0.43
VTN-202ENST00000539746 BMP8BP34820 402 aa12.35□□□□□ -0.43
VTN-202ENST00000539746 ADIGQ0VDE8 80 aa12.35□□□□□ -0.43
VTN-202ENST00000539746 NNTQ13423 1086 aa12.35□□□□□ -0.43
VTN-202ENST00000539746 PDK2Q15119 407 aa12.35□□□□□ -0.43
VTN-202ENST00000539746 SLC25A52Q3SY17 297 aa12.35□□□□□ -0.43
VTN-202ENST00000539746 PPP1R15BQ5SWA1 713 aa12.35□□□□□ -0.43
VTN-202ENST00000539746 BTBD8Q5XKL5 378 aa12.35□□□□□ -0.43
VTN-202ENST00000539746 PM20D1Q6GTS8 502 aa12.35□□□□□ -0.43
VTN-202ENST00000539746 PDZD4Q76G19 769 aaPredicted RBP12.35□□□□□ -0.43
VTN-202ENST00000539746 NT5DC3Q86UY8 548 aa12.35□□□□□ -0.43
VTN-202ENST00000539746 GPIHBP1Q8IV16 184 aa12.35□□□□□ -0.43
VTN-202ENST00000539746 SCN4BQ8IWT1 228 aa12.35□□□□□ -0.43
VTN-202ENST00000539746 KATNAL2Q8IYT4 538 aa12.35□□□□□ -0.43
VTN-202ENST00000539746 C17orf53Q8N3J3 647 aaPredicted RBP12.35□□□□□ -0.43
VTN-202ENST00000539746 WDTC1Q8N5D0 677 aa12.35□□□□□ -0.43
VTN-202ENST00000539746 TTC13Q8NBP0 860 aa12.35□□□□□ -0.43
VTN-202ENST00000539746 OR10T2Q8NGX3 314 aa12.35□□□□□ -0.43
VTN-202ENST00000539746 EXD1Q8NHP7 514 aa12.35□□□□□ -0.43
VTN-202ENST00000539746 ACTRT1Q8TDG2 376 aa12.35□□□□□ -0.43
VTN-202ENST00000539746 SERPINB11Q96P15 392 aa12.35□□□□□ -0.43
VTN-202ENST00000539746 CDCA3Q99618 268 aaPredicted RBP12.35□□□□□ -0.43
VTN-202ENST00000539746 PKMYT1Q99640 499 aa12.35□□□□□ -0.43
VTN-202ENST00000539746 L2HGDHQ9H9P8 463 aa12.35□□□□□ -0.43
VTN-202ENST00000539746 OSGEPQ9NPF4 335 aa12.35□□□□□ -0.43
VTN-202ENST00000539746 TLR9Q9NR96 1032 aa12.35□□□□□ -0.43
VTN-202ENST00000539746 METTL5Q9NRN9 209 aaKnown RBP12.35□□□□□ -0.43
VTN-202ENST00000539746 SCML2Q9UQR0 700 aa12.35□□□□□ -0.43
VTN-202ENST00000539746 CAPN6Q9Y6Q1 641 aa12.35□□□□□ -0.43
VTN-202ENST00000539746 DUSP10Q9Y6W6 482 aa12.35□□□□□ -0.43
VTN-202ENST00000539746 XYLBO75191 536 aa12.34□□□□□ -0.43
VTN-202ENST00000539746 TJP3O95049 919 aa12.34□□□□□ -0.43
VTN-202ENST00000539746 ITGB1P05556 798 aa12.34□□□□□ -0.43
VTN-202ENST00000539746 HAPLN1P10915 354 aaPredicted RBP12.34□□□□□ -0.43
VTN-202ENST00000539746 SYN1P17600 705 aa12.34□□□□□ -0.43
VTN-202ENST00000539746 YWHAQP27348 245 aa12.34□□□□□ -0.43
VTN-202ENST00000539746 OR1D2P34982 312 aa12.34□□□□□ -0.43
VTN-202ENST00000539746 CA8P35219 290 aa12.34□□□□□ -0.43
VTN-202ENST00000539746 GATMP50440 423 aa12.34□□□□□ -0.43
VTN-202ENST00000539746 ARPP19P56211 112 aa12.34□□□□□ -0.43
VTN-202ENST00000539746 TFDP2Q14188 446 aa12.34□□□□□ -0.43
VTN-202ENST00000539746 GLE1Q53GS7 698 aaKnown RBP12.34□□□□□ -0.43
VTN-202ENST00000539746 CYP4A22Q5TCH4 519 aa12.34□□□□□ -0.43
VTN-202ENST00000539746 KIAA0319Q5VV43 1072 aa12.34□□□□□ -0.43
VTN-202ENST00000539746 FAM183BPQ6ZVS7 135 aa12.34□□□□□ -0.43
VTN-202ENST00000539746 C16orf59Q7L2K0 433 aa12.34□□□□□ -0.43
VTN-202ENST00000539746 RSRC2Q7L4I2 434 aaKnown RBP12.34□□□□□ -0.43
VTN-202ENST00000539746 TCEAL8Q8IYN2 117 aa12.34□□□□□ -0.43
VTN-202ENST00000539746 ZNF276Q8N554 614 aa12.34□□□□□ -0.43
VTN-202ENST00000539746 ELMO3Q96BJ8 720 aa12.34□□□□□ -0.43
VTN-202ENST00000539746 ARHGEF26Q96DR7 871 aa12.34□□□□□ -0.43
VTN-202ENST00000539746 PGAP3Q96FM1 320 aaPredicted RBP12.34□□□□□ -0.43
VTN-202ENST00000539746 WDR24Q96S15 920 aa12.34□□□□□ -0.43
VTN-202ENST00000539746 OSBPL9Q96SU4 736 aa12.34□□□□□ -0.43
VTN-202ENST00000539746 SEPT5Q99719 369 aaPredicted RBP12.34□□□□□ -0.43
VTN-202ENST00000539746 MAK16Q9BXY0 300 aaKnown RBP12.34□□□□□ -0.43
VTN-202ENST00000539746 ZBP1Q9H171 429 aa12.34□□□□□ -0.43
VTN-202ENST00000539746 RETREG1Q9H6L5 497 aa12.34□□□□□ -0.43
VTN-202ENST00000539746 RCOR3Q9P2K3 495 aaPredicted RBP12.34□□□□□ -0.43
VTN-202ENST00000539746 MRFAP1Q9Y605 127 aa12.34□□□□□ -0.43
VTN-202ENST00000539746 USP3Q9Y6I4 520 aa12.34□□□□□ -0.43
VTN-202ENST00000539746 A0A1W2PPC1 479 aa12.33□□□□□ -0.44
VTN-202ENST00000539746 MTMR11A4FU01 709 aa12.33□□□□□ -0.44
VTN-202ENST00000539746 C2CD4BA6NLJ0 364 aa12.33□□□□□ -0.44
VTN-202ENST00000539746 EFCAB8A8MWE9 144 aa12.33□□□□□ -0.44
VTN-202ENST00000539746 F8VP50 259 aa12.33□□□□□ -0.44
VTN-202ENST00000539746 MDM4O15151 490 aa12.33□□□□□ -0.44
VTN-202ENST00000539746 ATP2C2O75185 946 aa12.33□□□□□ -0.44
VTN-202ENST00000539746 ABLIM3O94929 683 aa12.33□□□□□ -0.44
VTN-202ENST00000539746 FTCDO95954 541 aa12.33□□□□□ -0.44
VTN-202ENST00000539746 GLUD1P00367 558 aa12.33□□□□□ -0.44
VTN-202ENST00000539746 LRG1P02750 347 aa12.33□□□□□ -0.44
VTN-202ENST00000539746 MAGEA10P43363 369 aaPredicted RBP12.33□□□□□ -0.44
VTN-202ENST00000539746 RGS7P49802 495 aa12.33□□□□□ -0.44
VTN-202ENST00000539746 TUBP50607 506 aa12.33□□□□□ -0.44
VTN-202ENST00000539746 SLC5A3P53794 718 aa12.33□□□□□ -0.44
VTN-202ENST00000539746 DAOAP59103 153 aa12.33□□□□□ -0.44
VTN-202ENST00000539746 ROR1Q01973 937 aa12.33□□□□□ -0.44
VTN-202ENST00000539746 TCTN1Q2MV58 587 aa12.33□□□□□ -0.44
VTN-202ENST00000539746 EFHC2Q5JST6 749 aa12.33□□□□□ -0.44
VTN-202ENST00000539746 BRMS1LQ5PSV4 323 aa12.33□□□□□ -0.44
VTN-202ENST00000539746 RTP2Q5QGT7 225 aa12.33□□□□□ -0.44
VTN-202ENST00000539746 CC2D1AQ6P1N0 951 aaPredicted RBP12.33□□□□□ -0.44
VTN-202ENST00000539746 MAATS1Q7Z4T9 603 aa12.33□□□□□ -0.44
VTN-202ENST00000539746 SCUBE3Q8IX30 993 aa12.33□□□□□ -0.44
VTN-202ENST00000539746 CCDC26Q8TAB7 109 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms