RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 ABL1P00519 1130 aa17.77■□□□□ 0.44
DDB1-215ENST00000539712 CD44P16070 742 aaKnown RBP17.77■□□□□ 0.44
DDB1-215ENST00000539712 BMP6P22004 513 aa17.77■□□□□ 0.44
DDB1-215ENST00000539712 IFNAR2P48551 515 aa17.77■□□□□ 0.44
DDB1-215ENST00000539712 MAP3K7CLP57077 242 aa17.77■□□□□ 0.44
DDB1-215ENST00000539712 GPRIN1Q7Z2K8 1008 aa17.77■□□□□ 0.44
DDB1-215ENST00000539712 ADGRG2Q8IZP9 1017 aa17.77■□□□□ 0.44
DDB1-215ENST00000539712 CPA6Q8N4T0 437 aa17.77■□□□□ 0.44
DDB1-215ENST00000539712 KIAA1958Q8N8K9 716 aa17.77■□□□□ 0.44
DDB1-215ENST00000539712 RUBCNQ92622 972 aa17.77■□□□□ 0.44
DDB1-215ENST00000539712 SMARCE1Q969G3 411 aa17.77■□□□□ 0.44
DDB1-215ENST00000539712 FBXO32Q969P5 355 aa17.77■□□□□ 0.44
DDB1-215ENST00000539712 P2RY13Q9BPV8 354 aa17.77■□□□□ 0.44
DDB1-215ENST00000539712 COMMD8Q9NX08 183 aa17.77■□□□□ 0.44
DDB1-215ENST00000539712 GMIPQ9P107 970 aa17.77■□□□□ 0.44
DDB1-215ENST00000539712 CHURC1-FNTBB4DL54 471 aa17.76■□□□□ 0.43
DDB1-215ENST00000539712 SCAMP3O14828 347 aaKnown RBP17.76■□□□□ 0.43
DDB1-215ENST00000539712 HRO43593 1189 aa17.76■□□□□ 0.43
DDB1-215ENST00000539712 SMC2O95347 1197 aa17.76■□□□□ 0.43
DDB1-215ENST00000539712 HOXA6P31267 233 aa17.76■□□□□ 0.43
DDB1-215ENST00000539712 FNTBP49356 437 aa17.76■□□□□ 0.43
DDB1-215ENST00000539712 NRLP54845 237 aa17.76■□□□□ 0.43
DDB1-215ENST00000539712 GRSF1Q12849 480 aaKnown RBP eCLIP17.76■□□□□ 0.43
DDB1-215ENST00000539712 CBWD6Q4V339 395 aa17.76■□□□□ 0.43
DDB1-215ENST00000539712 CBWD3Q5JTY5 395 aa17.76■□□□□ 0.43
DDB1-215ENST00000539712 CBWD5Q5RIA9 395 aa17.76■□□□□ 0.43
DDB1-215ENST00000539712 CLEC20AQ6ZU45 233 aa17.76■□□□□ 0.43
DDB1-215ENST00000539712 FILIP1Q7Z7B0 1213 aa17.76■□□□□ 0.43
DDB1-215ENST00000539712 PDZD8Q8NEN9 1154 aa17.76■□□□□ 0.43
DDB1-215ENST00000539712 TATDN2Q93075 761 aa17.76■□□□□ 0.43
DDB1-215ENST00000539712 CYFIP2Q96F07 1278 aa17.76■□□□□ 0.43
DDB1-215ENST00000539712 ARID3AQ99856 593 aa17.76■□□□□ 0.43
DDB1-215ENST00000539712 NT5C1AQ9BXI3 368 aa17.76■□□□□ 0.43
DDB1-215ENST00000539712 CCSER2Q9H7U1 834 aa17.76■□□□□ 0.43
DDB1-215ENST00000539712 POLR3BQ9NW08 1133 aaPredicted RBP17.76■□□□□ 0.43
DDB1-215ENST00000539712 RAB20Q9NX57 234 aa17.76■□□□□ 0.43
DDB1-215ENST00000539712 MAN1B1Q9UKM7 699 aa17.76■□□□□ 0.43
DDB1-215ENST00000539712 COQ4Q9Y3A0 265 aa17.76■□□□□ 0.43
DDB1-215ENST00000539712 CACNA1AO00555 2505 aa17.75■□□□□ 0.43
DDB1-215ENST00000539712 SLC16A3O15427 465 aaKnown RBP17.75■□□□□ 0.43
DDB1-215ENST00000539712 EPB41P11171 864 aaKnown RBP17.75■□□□□ 0.43
DDB1-215ENST00000539712 CD58P19256 250 aa17.75■□□□□ 0.43
DDB1-215ENST00000539712 DRD1P21728 446 aa17.75■□□□□ 0.43
DDB1-215ENST00000539712 ADORA2BP29275 332 aa17.75■□□□□ 0.43
DDB1-215ENST00000539712 OPRD1P41143 372 aa17.75■□□□□ 0.43
DDB1-215ENST00000539712 MXI1P50539 228 aa17.75■□□□□ 0.43
DDB1-215ENST00000539712 FKBP3Q00688 224 aaKnown RBP17.75■□□□□ 0.43
DDB1-215ENST00000539712 AMPD2Q01433 879 aa17.75■□□□□ 0.43
DDB1-215ENST00000539712 PPP2R5DQ14738 602 aa17.75■□□□□ 0.43
DDB1-215ENST00000539712 ISM2Q6H9L7 571 aa17.75■□□□□ 0.43
DDB1-215ENST00000539712 FBXL13Q8NEE6 735 aa17.75■□□□□ 0.43
DDB1-215ENST00000539712 WBP2Q969T9 261 aa17.75■□□□□ 0.43
DDB1-215ENST00000539712 FAXDC2Q96IV6 333 aa17.75■□□□□ 0.43
DDB1-215ENST00000539712 IMPG2Q9BZV3 1241 aa17.75■□□□□ 0.43
DDB1-215ENST00000539712 CFAP97Q9P2B7 532 aa17.75■□□□□ 0.43
DDB1-215ENST00000539712 SMG5Q9UPR3 1016 aaKnown RBP17.75■□□□□ 0.43
DDB1-215ENST00000539712 ANTXRLA6NF34 631 aa17.74■□□□□ 0.43
DDB1-215ENST00000539712 RNF40O75150 1001 aa17.74■□□□□ 0.43
DDB1-215ENST00000539712 CYP17A1P05093 508 aa17.74■□□□□ 0.43
DDB1-215ENST00000539712 FAM200BP0CF97 657 aa17.74■□□□□ 0.43
DDB1-215ENST00000539712 MBL2P11226 248 aaPredicted RBP17.74■□□□□ 0.43
DDB1-215ENST00000539712 TGM1P22735 817 aa17.74■□□□□ 0.43
DDB1-215ENST00000539712 TUBP50607 506 aa17.74■□□□□ 0.43
DDB1-215ENST00000539712 LRRC63Q05C16 580 aa17.74■□□□□ 0.43
DDB1-215ENST00000539712 MESP2Q0VG99 397 aa17.74■□□□□ 0.43
DDB1-215ENST00000539712 SRSF5Q13243 272 aaKnown RBP17.74■□□□□ 0.43
DDB1-215ENST00000539712 HECTD3Q5T447 861 aa17.74■□□□□ 0.43
DDB1-215ENST00000539712 RHBDF2Q6PJF5 856 aa17.74■□□□□ 0.43
DDB1-215ENST00000539712 CD101Q93033 1021 aa17.74■□□□□ 0.43
DDB1-215ENST00000539712 SLC35C1Q96A29 364 aa17.74■□□□□ 0.43
DDB1-215ENST00000539712 DUSP9Q99956 384 aaKnown RBP17.74■□□□□ 0.43
DDB1-215ENST00000539712 OSER1Q9NX31 292 aa17.74■□□□□ 0.43
DDB1-215ENST00000539712 LAMA1P25391 3075 aa17.74■□□□□ 0.43
DDB1-215ENST00000539712 PPP1R3GB7ZBB8 358 aa17.73■□□□□ 0.43
DDB1-215ENST00000539712 GREM1O60565 184 aa17.73■□□□□ 0.43
DDB1-215ENST00000539712 NFATC1O95644 943 aa17.73■□□□□ 0.43
DDB1-215ENST00000539712 TBX18O95935 607 aa17.73■□□□□ 0.43
DDB1-215ENST00000539712 CHRM1P11229 460 aaPredicted RBP17.73■□□□□ 0.43
DDB1-215ENST00000539712 RAD23BP54727 409 aa17.73■□□□□ 0.43
DDB1-215ENST00000539712 DHCR24Q15392 516 aa17.73■□□□□ 0.43
DDB1-215ENST00000539712 PPP1R26Q5T8A7 1209 aaPredicted RBP17.73■□□□□ 0.43
DDB1-215ENST00000539712 HEATR6Q6AI08 1181 aaKnown RBP17.73■□□□□ 0.43
DDB1-215ENST00000539712 LONP2Q86WA8 852 aa17.73■□□□□ 0.43
DDB1-215ENST00000539712 KIAA2013Q8IYS2 634 aa17.73■□□□□ 0.43
DDB1-215ENST00000539712 SLC4A11Q8NBS3 891 aa17.73■□□□□ 0.43
DDB1-215ENST00000539712 DHTKD1Q96HY7 919 aaPredicted RBP17.73■□□□□ 0.43
DDB1-215ENST00000539712 TSG101Q99816 390 aa17.73■□□□□ 0.43
DDB1-215ENST00000539712 NMUR1Q9HB89 426 aa17.73■□□□□ 0.43
DDB1-215ENST00000539712 CISHQ9NSE2 258 aa17.73■□□□□ 0.43
DDB1-215ENST00000539712 SCML2Q9UQR0 700 aa17.73■□□□□ 0.43
DDB1-215ENST00000539712 MYOFQ9NZM1 2061 aa17.73■□□□□ 0.43
DDB1-215ENST00000539712 MYH10P35580 1976 aa17.72■□□□□ 0.43
DDB1-215ENST00000539712 E2F8A0AVK6 867 aa17.72■□□□□ 0.43
DDB1-215ENST00000539712 K7EQS6 105 aa17.72■□□□□ 0.43
DDB1-215ENST00000539712 STX10O60499 249 aa17.72■□□□□ 0.43
DDB1-215ENST00000539712 NR1H3Q13133 447 aa17.72■□□□□ 0.43
DDB1-215ENST00000539712 MORC3Q14149 939 aa17.72■□□□□ 0.43
DDB1-215ENST00000539712 ZNF394Q53GI3 561 aa17.72■□□□□ 0.43
DDB1-215ENST00000539712 TTI2Q6NXR4 508 aa17.72■□□□□ 0.43
DDB1-215ENST00000539712 SFTPA1Q8IWL2 248 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms