RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 ACSS3Q9H6R3 686 aa14.68□□□□□ -0.06
UBE3B-210ENST00000539599 CSADQ9Y600 493 aa14.68□□□□□ -0.06
UBE3B-210ENST00000539599 SCN1AP35498 2009 aa14.68□□□□□ -0.06
UBE3B-210ENST00000539599 APOC4-APOC2K7ER74 178 aa14.68□□□□□ -0.06
UBE3B-210ENST00000539599 C22orf31O95567 290 aa14.68□□□□□ -0.06
UBE3B-210ENST00000539599 APOC2P02655 101 aa14.68□□□□□ -0.06
UBE3B-210ENST00000539599 PFKMP08237 780 aa14.68□□□□□ -0.06
UBE3B-210ENST00000539599 CCNB1P14635 433 aa14.68□□□□□ -0.06
UBE3B-210ENST00000539599 PTPN7P35236 360 aa14.68□□□□□ -0.06
UBE3B-210ENST00000539599 ROR1Q01973 937 aa14.68□□□□□ -0.06
UBE3B-210ENST00000539599 TTLL12Q14166 644 aaPredicted RBP14.68□□□□□ -0.06
UBE3B-210ENST00000539599 R3HDM1Q15032 1099 aaKnown RBP14.68□□□□□ -0.06
UBE3B-210ENST00000539599 SEPT7Q16181 437 aaKnown RBP14.68□□□□□ -0.06
UBE3B-210ENST00000539599 NOL9Q5SY16 702 aaKnown RBP14.68□□□□□ -0.06
UBE3B-210ENST00000539599 PPP1R26Q5T8A7 1209 aaPredicted RBP14.68□□□□□ -0.06
UBE3B-210ENST00000539599 NLRP9Q7RTR0 991 aa14.68□□□□□ -0.06
UBE3B-210ENST00000539599 UNC5BQ8IZJ1 945 aa14.68□□□□□ -0.06
UBE3B-210ENST00000539599 PDIK1LQ8N165 341 aa14.68□□□□□ -0.06
UBE3B-210ENST00000539599 SLC7A6OSQ96CW6 309 aaPredicted RBP14.68□□□□□ -0.06
UBE3B-210ENST00000539599 GABBR2O75899 941 aa14.68□□□□□ -0.06
UBE3B-210ENST00000539599 IL4RP24394 825 aa14.68□□□□□ -0.06
UBE3B-210ENST00000539599 GBP2P32456 591 aaPredicted RBP14.68□□□□□ -0.06
UBE3B-210ENST00000539599 ELF1P32519 619 aa14.68□□□□□ -0.06
UBE3B-210ENST00000539599 GMPRP36959 345 aa14.68□□□□□ -0.06
UBE3B-210ENST00000539599 RFWD3Q6PCD5 774 aa14.68□□□□□ -0.06
UBE3B-210ENST00000539599 ADGRD1Q6QNK2 874 aa14.68□□□□□ -0.06
UBE3B-210ENST00000539599 CCDC125Q86Z20 511 aa14.68□□□□□ -0.06
UBE3B-210ENST00000539599 MPP5Q8N3R9 675 aa14.68□□□□□ -0.06
UBE3B-210ENST00000539599 PPM1NQ8N819 430 aa14.68□□□□□ -0.06
UBE3B-210ENST00000539599 CMASQ8NFW8 434 aaPredicted RBP14.68□□□□□ -0.06
UBE3B-210ENST00000539599 NDRG1Q92597 394 aaKnown RBP14.68□□□□□ -0.06
UBE3B-210ENST00000539599 MRPL45Q9BRJ2 306 aaKnown RBP14.68□□□□□ -0.06
UBE3B-210ENST00000539599 SMG5Q9UPR3 1016 aaKnown RBP14.68□□□□□ -0.06
UBE3B-210ENST00000539599 USH1CQ9Y6N9 552 aa14.68□□□□□ -0.06
UBE3B-210ENST00000539599 BRCA1P38398 1863 aaKnown RBP14.68□□□□□ -0.06
UBE3B-210ENST00000539599 MYO18AQ92614 2054 aaKnown RBP14.67□□□□□ -0.06
UBE3B-210ENST00000539599 CYB561D2O14569 222 aa14.67□□□□□ -0.06
UBE3B-210ENST00000539599 SKAP2O75563 359 aaPredicted RBP14.67□□□□□ -0.06
UBE3B-210ENST00000539599 SLC8A1P32418 973 aa14.67□□□□□ -0.06
UBE3B-210ENST00000539599 PHKA2P46019 1235 aa14.67□□□□□ -0.06
UBE3B-210ENST00000539599 IRX4P78413 519 aa14.67□□□□□ -0.06
UBE3B-210ENST00000539599 TAP1Q03518 808 aa14.67□□□□□ -0.06
UBE3B-210ENST00000539599 GRM1Q13255 1194 aa14.67□□□□□ -0.06
UBE3B-210ENST00000539599 GOLGA7BQ2TAP0 167 aa14.67□□□□□ -0.06
UBE3B-210ENST00000539599 MDH1BQ5I0G3 518 aa14.67□□□□□ -0.06
UBE3B-210ENST00000539599 CCDC62Q6P9F0 684 aa14.67□□□□□ -0.06
UBE3B-210ENST00000539599 BANPQ8N9N5 519 aa14.67□□□□□ -0.06
UBE3B-210ENST00000539599 MCRS1Q96EZ8 462 aa14.67□□□□□ -0.06
UBE3B-210ENST00000539599 FAM167AQ96KS9 214 aa14.67□□□□□ -0.06
UBE3B-210ENST00000539599 ZNF570Q96NI8 536 aa14.67□□□□□ -0.06
UBE3B-210ENST00000539599 MMP19Q99542 508 aa14.67□□□□□ -0.06
UBE3B-210ENST00000539599 CEP41Q9BYV8 373 aa14.67□□□□□ -0.06
UBE3B-210ENST00000539599 FOXP3Q9BZS1 431 aa14.67□□□□□ -0.06
UBE3B-210ENST00000539599 LHX5Q9H2C1 402 aa14.67□□□□□ -0.06
UBE3B-210ENST00000539599 DPEP3Q9H4B8 488 aa14.67□□□□□ -0.06
UBE3B-210ENST00000539599 PLAC1Q9HBJ0 212 aa14.67□□□□□ -0.06
UBE3B-210ENST00000539599 SMYD2Q9NRG4 433 aa14.67□□□□□ -0.06
UBE3B-210ENST00000539599 TMPRSS4Q9NRS4 437 aa14.67□□□□□ -0.06
UBE3B-210ENST00000539599 MAGEB2O15479 319 aa14.67□□□□□ -0.06
UBE3B-210ENST00000539599 MED7O43513 233 aa14.67□□□□□ -0.06
UBE3B-210ENST00000539599 LPXNO60711 386 aa14.67□□□□□ -0.06
UBE3B-210ENST00000539599 ENTPD5O75356 428 aa14.67□□□□□ -0.06
UBE3B-210ENST00000539599 LGR5O75473 907 aa14.67□□□□□ -0.06
UBE3B-210ENST00000539599 APRTP07741 180 aa14.67□□□□□ -0.06
UBE3B-210ENST00000539599 KRT81Q14533 505 aa14.67□□□□□ -0.06
UBE3B-210ENST00000539599 SETDB1Q15047 1291 aa14.67□□□□□ -0.06
UBE3B-210ENST00000539599 CCDC14Q49A88 953 aa14.67□□□□□ -0.06
UBE3B-210ENST00000539599 CES4AQ5XG92 561 aa14.67□□□□□ -0.06
UBE3B-210ENST00000539599 TLDC1Q6P9B6 456 aa14.67□□□□□ -0.06
UBE3B-210ENST00000539599 LONP2Q86WA8 852 aa14.67□□□□□ -0.06
UBE3B-210ENST00000539599 SLC16A10Q8TF71 515 aa14.67□□□□□ -0.06
UBE3B-210ENST00000539599 KCNN1Q92952 543 aa14.67□□□□□ -0.06
UBE3B-210ENST00000539599 MYCBPQ99417 103 aaPredicted RBP14.67□□□□□ -0.06
UBE3B-210ENST00000539599 TBC1D10AQ9BXI6 508 aa14.67□□□□□ -0.06
UBE3B-210ENST00000539599 ARMCX1Q9P291 453 aa14.67□□□□□ -0.06
UBE3B-210ENST00000539599 SLC24A2Q9UI40 661 aa14.67□□□□□ -0.06
UBE3B-210ENST00000539599 GJD2Q9UKL4 321 aa14.67□□□□□ -0.06
UBE3B-210ENST00000539599 TNFSF13BQ9Y275 285 aa14.67□□□□□ -0.06
UBE3B-210ENST00000539599 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.66□□□□□ -0.06
UBE3B-210ENST00000539599 CFAP69A5D8W1 941 aa14.66□□□□□ -0.06
UBE3B-210ENST00000539599 C2CD4BA6NLJ0 364 aa14.66□□□□□ -0.06
UBE3B-210ENST00000539599 TGFB3P10600 412 aa14.66□□□□□ -0.06
UBE3B-210ENST00000539599 NEFHP12036 1026 aa14.66□□□□□ -0.06
UBE3B-210ENST00000539599 GPD1P21695 349 aa14.66□□□□□ -0.06
UBE3B-210ENST00000539599 CPA2P48052 419 aa14.66□□□□□ -0.06
UBE3B-210ENST00000539599 RABGGTBP53611 331 aa14.66□□□□□ -0.06
UBE3B-210ENST00000539599 YARSP54577 528 aaKnown RBP14.66□□□□□ -0.06
UBE3B-210ENST00000539599 CRADDP78560 199 aa14.66□□□□□ -0.06
UBE3B-210ENST00000539599 ACVR2BQ13705 512 aa14.66□□□□□ -0.06
UBE3B-210ENST00000539599 TAZQ16635 292 aa14.66□□□□□ -0.06
UBE3B-210ENST00000539599 RFX8Q6ZV50 586 aa14.66□□□□□ -0.06
UBE3B-210ENST00000539599 TTC30AQ86WT1 665 aa14.66□□□□□ -0.06
UBE3B-210ENST00000539599 PQLC3Q8N755 202 aa14.66□□□□□ -0.06
UBE3B-210ENST00000539599 PLD5Q8N7P1 536 aa14.66□□□□□ -0.06
UBE3B-210ENST00000539599 C7orf31Q8N865 590 aa14.66□□□□□ -0.06
UBE3B-210ENST00000539599 GBP7Q8N8V2 638 aaPredicted RBP14.66□□□□□ -0.06
UBE3B-210ENST00000539599 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.66□□□□□ -0.06
UBE3B-210ENST00000539599 NLRP7Q8WX94 980 aa14.66□□□□□ -0.06
UBE3B-210ENST00000539599 APOL6Q9BWW8 343 aa14.66□□□□□ -0.06
UBE3B-210ENST00000539599 SLC13A1Q9BZW2 595 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms