RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 ZNF214Q9UL59 606 aaPredicted RBP13.81□□□□□ -0.2
UBE3B-209ENST00000539584 USP18Q9UMW8 372 aa13.81□□□□□ -0.2
UBE3B-209ENST00000539584 ZBTB12Q9Y330 459 aaPredicted RBP13.81□□□□□ -0.2
UBE3B-209ENST00000539584 NUMBLQ9Y6R0 609 aa13.81□□□□□ -0.2
UBE3B-209ENST00000539584 TCRBV7S3A2A0A539 114 aa13.81□□□□□ -0.2
UBE3B-209ENST00000539584 CAPN14A8MX76 684 aa13.81□□□□□ -0.2
UBE3B-209ENST00000539584 TBX10O75333 385 aa13.81□□□□□ -0.2
UBE3B-209ENST00000539584 BGNP21810 368 aa13.81□□□□□ -0.2
UBE3B-209ENST00000539584 CNTFP26441 200 aa13.81□□□□□ -0.2
UBE3B-209ENST00000539584 SERPINB9P50453 376 aa13.81□□□□□ -0.2
UBE3B-209ENST00000539584 YWHAGP61981 247 aaKnown RBP eCLIP13.81□□□□□ -0.2
UBE3B-209ENST00000539584 GAD2Q05329 585 aa13.81□□□□□ -0.2
UBE3B-209ENST00000539584 MXD4Q14582 209 aaPredicted RBP13.81□□□□□ -0.2
UBE3B-209ENST00000539584 PDK2Q15119 407 aa13.81□□□□□ -0.2
UBE3B-209ENST00000539584 SMTNL2Q2TAL5 461 aa13.81□□□□□ -0.2
UBE3B-209ENST00000539584 FAM160B1Q5W0V3 765 aa13.81□□□□□ -0.2
UBE3B-209ENST00000539584 DARS2Q6PI48 645 aaKnown RBP13.81□□□□□ -0.2
UBE3B-209ENST00000539584 RINLQ6ZS11 566 aa13.81□□□□□ -0.2
UBE3B-209ENST00000539584 CYS1Q717R9 158 aa13.81□□□□□ -0.2
UBE3B-209ENST00000539584 XYLT1Q86Y38 959 aa13.81□□□□□ -0.2
UBE3B-209ENST00000539584 ZBTB8OSQ8IWT0 167 aa13.81□□□□□ -0.2
UBE3B-209ENST00000539584 CEP120Q8N960 986 aa13.81□□□□□ -0.2
UBE3B-209ENST00000539584 MCUQ8NE86 351 aa13.81□□□□□ -0.2
UBE3B-209ENST00000539584 E2F7Q96AV8 911 aa13.81□□□□□ -0.2
UBE3B-209ENST00000539584 FAM167AQ96KS9 214 aa13.81□□□□□ -0.2
UBE3B-209ENST00000539584 TEPSINQ96N21 525 aa13.81□□□□□ -0.2
UBE3B-209ENST00000539584 ZNF184Q99676 751 aaPredicted RBP13.81□□□□□ -0.2
UBE3B-209ENST00000539584 ACO2Q99798 780 aaKnown RBP13.81□□□□□ -0.2
UBE3B-209ENST00000539584 XYLT2Q9H1B5 865 aa13.81□□□□□ -0.2
UBE3B-209ENST00000539584 FAM96AQ9H5X1 160 aa13.81□□□□□ -0.2
UBE3B-209ENST00000539584 GPAMQ9HCL2 828 aa13.81□□□□□ -0.2
UBE3B-209ENST00000539584 DDX43Q9NXZ2 648 aaKnown RBP13.81□□□□□ -0.2
UBE3B-209ENST00000539584 PDP2Q9P2J9 529 aa13.81□□□□□ -0.2
UBE3B-209ENST00000539584 ZNF487B1APH4 448 aa13.8□□□□□ -0.2
UBE3B-209ENST00000539584 SMIM24O75264 130 aa13.8□□□□□ -0.2
UBE3B-209ENST00000539584 CSDE1O75534 798 aaKnown RBP13.8□□□□□ -0.2
UBE3B-209ENST00000539584 CIB2O75838 187 aa13.8□□□□□ -0.2
UBE3B-209ENST00000539584 PDHA1P08559 390 aa13.8□□□□□ -0.2
UBE3B-209ENST00000539584 TGM2P21980 687 aa13.8□□□□□ -0.2
UBE3B-209ENST00000539584 SP100P23497 879 aaPredicted RBP13.8□□□□□ -0.2
UBE3B-209ENST00000539584 MIPP30301 263 aa13.8□□□□□ -0.2
UBE3B-209ENST00000539584 ZNF143P52747 638 aaPredicted RBP13.8□□□□□ -0.2
UBE3B-209ENST00000539584 SP4Q02446 784 aa13.8□□□□□ -0.2
UBE3B-209ENST00000539584 ZNF394Q53GI3 561 aa13.8□□□□□ -0.2
UBE3B-209ENST00000539584 KCNT1Q5JUK3 1230 aa13.8□□□□□ -0.2
UBE3B-209ENST00000539584 DENND1BQ6P3S1 775 aa13.8□□□□□ -0.2
UBE3B-209ENST00000539584 SESTD1Q86VW0 696 aa13.8□□□□□ -0.2
UBE3B-209ENST00000539584 CRLF3Q8IUI8 442 aa13.8□□□□□ -0.2
UBE3B-209ENST00000539584 MFN1Q8IWA4 741 aa13.8□□□□□ -0.2
UBE3B-209ENST00000539584 TTLL6Q8N841 843 aa13.8□□□□□ -0.2
UBE3B-209ENST00000539584 JOSD2Q8TAC2 188 aa13.8□□□□□ -0.2
UBE3B-209ENST00000539584 USP6NLQ92738 828 aa13.8□□□□□ -0.2
UBE3B-209ENST00000539584 FAF2Q96CS3 445 aa13.8□□□□□ -0.2
UBE3B-209ENST00000539584 KLF6Q99612 283 aaPredicted RBP13.8□□□□□ -0.2
UBE3B-209ENST00000539584 SYT15Q9BQS2 421 aa13.8□□□□□ -0.2
UBE3B-209ENST00000539584 BCO2Q9BYV7 579 aa13.8□□□□□ -0.2
UBE3B-209ENST00000539584 YIPF3Q9GZM5 350 aa13.8□□□□□ -0.2
UBE3B-209ENST00000539584 KLC2Q9H0B6 622 aa13.8□□□□□ -0.2
UBE3B-209ENST00000539584 MYOZ2Q9NPC6 264 aa13.8□□□□□ -0.2
UBE3B-209ENST00000539584 FBXO6Q9NRD1 293 aaPredicted RBP13.8□□□□□ -0.2
UBE3B-209ENST00000539584 TAGLN3Q9UI15 199 aa13.8□□□□□ -0.2
UBE3B-209ENST00000539584 C19orf81C9J6K1 198 aa13.8□□□□□ -0.2
UBE3B-209ENST00000539584 SPECC1L-ADORA2AF8WAN1 911 aa13.8□□□□□ -0.2
UBE3B-209ENST00000539584 FKBP6O75344 327 aa13.8□□□□□ -0.2
UBE3B-209ENST00000539584 TM7SF2O76062 418 aa13.8□□□□□ -0.2
UBE3B-209ENST00000539584 IL18RAPO95256 599 aa13.8□□□□□ -0.2
UBE3B-209ENST00000539584 HMGCRP04035 888 aa13.8□□□□□ -0.2
UBE3B-209ENST00000539584 AP2B1P63010 937 aa13.8□□□□□ -0.2
UBE3B-209ENST00000539584 ROR2Q01974 943 aaKnown RBP13.8□□□□□ -0.2
UBE3B-209ENST00000539584 RCN2Q14257 317 aa13.8□□□□□ -0.2
UBE3B-209ENST00000539584 KYAT3Q6YP21 454 aaKnown RBP13.8□□□□□ -0.2
UBE3B-209ENST00000539584 ADGRG6Q86SQ4 1221 aa13.8□□□□□ -0.2
UBE3B-209ENST00000539584 NIM1KQ8IY84 436 aa13.8□□□□□ -0.2
UBE3B-209ENST00000539584 KIAA0319LQ8IZA0 1049 aa13.8□□□□□ -0.2
UBE3B-209ENST00000539584 TTC39CQ8N584 583 aa13.8□□□□□ -0.2
UBE3B-209ENST00000539584 CNPY3Q9BT09 278 aa13.8□□□□□ -0.2
UBE3B-209ENST00000539584 ADAM33Q9BZ11 813 aa13.8□□□□□ -0.2
UBE3B-209ENST00000539584 BCLAF3A2AJT9 711 aaKnown RBP13.79□□□□□ -0.2
UBE3B-209ENST00000539584 B2RBV5 119 aa13.79□□□□□ -0.2
UBE3B-209ENST00000539584 TRIM49D1C9J1S8 452 aa13.79□□□□□ -0.2
UBE3B-209ENST00000539584 KRT36O76013 467 aa13.79□□□□□ -0.2
UBE3B-209ENST00000539584 C1QAP02745 245 aa13.79□□□□□ -0.2
UBE3B-209ENST00000539584 SERPINA6P08185 405 aa13.79□□□□□ -0.2
UBE3B-209ENST00000539584 HOXC6P09630 235 aa13.79□□□□□ -0.2
UBE3B-209ENST00000539584 CD19P15391 556 aa13.79□□□□□ -0.2
UBE3B-209ENST00000539584 CRHR1P34998 444 aa13.79□□□□□ -0.2
UBE3B-209ENST00000539584 PEX19P40855 299 aa13.79□□□□□ -0.2
UBE3B-209ENST00000539584 PAPOLAP51003 745 aaKnown RBP13.79□□□□□ -0.2
UBE3B-209ENST00000539584 WASHC5Q12768 1159 aa13.79□□□□□ -0.2
UBE3B-209ENST00000539584 BOLA3Q53S33 107 aa13.79□□□□□ -0.2
UBE3B-209ENST00000539584 ZNF667Q5HYK9 610 aa13.79□□□□□ -0.2
UBE3B-209ENST00000539584 DCAF15Q66K64 600 aa13.79□□□□□ -0.2
UBE3B-209ENST00000539584 AAGABQ6PD74 315 aa13.79□□□□□ -0.2
UBE3B-209ENST00000539584 TIFABQ6ZNK6 161 aa13.79□□□□□ -0.2
UBE3B-209ENST00000539584 IGDCC3Q8IVU1 814 aa13.79□□□□□ -0.2
UBE3B-209ENST00000539584 SCUBE1Q8IWY4 988 aa13.79□□□□□ -0.2
UBE3B-209ENST00000539584 DHX37Q8IY37 1157 aaKnown RBP13.79□□□□□ -0.2
UBE3B-209ENST00000539584 ARHGAP18Q8N392 663 aa13.79□□□□□ -0.2
UBE3B-209ENST00000539584 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.79□□□□□ -0.2
UBE3B-209ENST00000539584 TEKT4Q8WW24 435 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms