RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 KIF18AQ8NI77 898 aa11.19□□□□□ -0.62
LEMD3-202ENST00000539442 SPPL3Q8TCT6 385 aa11.19□□□□□ -0.62
LEMD3-202ENST00000539442 POF1BQ8WVV4 589 aa11.19□□□□□ -0.62
LEMD3-202ENST00000539442 IRGQQ8WZA9 623 aa11.19□□□□□ -0.62
LEMD3-202ENST00000539442 RNF25Q96BH1 459 aaPredicted RBP11.19□□□□□ -0.62
LEMD3-202ENST00000539442 SPATA17Q96L03 361 aa11.19□□□□□ -0.62
LEMD3-202ENST00000539442 PGLYRP2Q96PD5 576 aa11.19□□□□□ -0.62
LEMD3-202ENST00000539442 MCEEQ96PE7 176 aa11.19□□□□□ -0.62
LEMD3-202ENST00000539442 NAPGQ99747 312 aaPredicted RBP11.19□□□□□ -0.62
LEMD3-202ENST00000539442 TCF25Q9BQ70 676 aa11.19□□□□□ -0.62
LEMD3-202ENST00000539442 EMILIN2Q9BXX0 1053 aa11.19□□□□□ -0.62
LEMD3-202ENST00000539442 PBX4Q9BYU1 374 aa11.19□□□□□ -0.62
LEMD3-202ENST00000539442 NGRNQ9NPE2 291 aaKnown RBP11.19□□□□□ -0.62
LEMD3-202ENST00000539442 TLR9Q9NR96 1032 aa11.19□□□□□ -0.62
LEMD3-202ENST00000539442 METTL5Q9NRN9 209 aaKnown RBP11.19□□□□□ -0.62
LEMD3-202ENST00000539442 COMMD8Q9NX08 183 aa11.19□□□□□ -0.62
LEMD3-202ENST00000539442 CHORDC1Q9UHD1 332 aaPredicted RBP11.19□□□□□ -0.62
LEMD3-202ENST00000539442 IP6K2Q9UHH9 426 aa11.19□□□□□ -0.62
LEMD3-202ENST00000539442 TMEM59LQ9UK28 342 aa11.19□□□□□ -0.62
LEMD3-202ENST00000539442 USP3Q9Y6I4 520 aa11.19□□□□□ -0.62
LEMD3-202ENST00000539442 NLRC5Q86WI3 1866 aa11.19□□□□□ -0.62
LEMD3-202ENST00000539442 PTPRDP23468 1912 aa11.18□□□□□ -0.62
LEMD3-202ENST00000539442 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.18□□□□□ -0.62
LEMD3-202ENST00000539442 CTAGE9A4FU28 777 aa11.18□□□□□ -0.62
LEMD3-202ENST00000539442 TNFRSF10BO14763 440 aa11.18□□□□□ -0.62
LEMD3-202ENST00000539442 FSCN2O14926 492 aa11.18□□□□□ -0.62
LEMD3-202ENST00000539442 TEX28O15482 410 aa11.18□□□□□ -0.62
LEMD3-202ENST00000539442 HSF2BPO75031 334 aa11.18□□□□□ -0.62
LEMD3-202ENST00000539442 PROSCO94903 275 aa11.18□□□□□ -0.62
LEMD3-202ENST00000539442 ARHGEF15O94989 841 aa11.18□□□□□ -0.62
LEMD3-202ENST00000539442 VNN2O95498 520 aa11.18□□□□□ -0.62
LEMD3-202ENST00000539442 ZBED1O96006 694 aa11.18□□□□□ -0.62
LEMD3-202ENST00000539442 C1RP00736 705 aa11.18□□□□□ -0.62
LEMD3-202ENST00000539442 ADH1AP07327 375 aa11.18□□□□□ -0.62
LEMD3-202ENST00000539442 DESP17661 470 aa11.18□□□□□ -0.62
LEMD3-202ENST00000539442 SLC5A3P53794 718 aa11.18□□□□□ -0.62
LEMD3-202ENST00000539442 DAOAP59103 153 aa11.18□□□□□ -0.62
LEMD3-202ENST00000539442 RPL7AP62424 266 aaKnown RBP11.18□□□□□ -0.62
LEMD3-202ENST00000539442 ADCY1Q08828 1119 aa11.18□□□□□ -0.62
LEMD3-202ENST00000539442 PIGHQ14442 188 aaPredicted RBP11.18□□□□□ -0.62
LEMD3-202ENST00000539442 MESDQ14696 234 aa11.18□□□□□ -0.62
LEMD3-202ENST00000539442 ACAP1Q15027 740 aa11.18□□□□□ -0.62
LEMD3-202ENST00000539442 MGAT5BQ3V5L5 792 aa11.18□□□□□ -0.62
LEMD3-202ENST00000539442 DNTTIP2Q5QJE6 756 aaKnown RBP11.18□□□□□ -0.62
LEMD3-202ENST00000539442 PM20D1Q6GTS8 502 aa11.18□□□□□ -0.62
LEMD3-202ENST00000539442 GPRIN1Q7Z2K8 1008 aa11.18□□□□□ -0.62
LEMD3-202ENST00000539442 PHLDB2Q86SQ0 1253 aa11.18□□□□□ -0.62
LEMD3-202ENST00000539442 SCN4BQ8IWT1 228 aa11.18□□□□□ -0.62
LEMD3-202ENST00000539442 SCUBE3Q8IX30 993 aa11.18□□□□□ -0.62
LEMD3-202ENST00000539442 TDHQ8IZJ6 230 aa11.18□□□□□ -0.62
LEMD3-202ENST00000539442 NIPA2Q8N8Q9 360 aa11.18□□□□□ -0.62
LEMD3-202ENST00000539442 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.18□□□□□ -0.62
LEMD3-202ENST00000539442 SEPT5Q99719 369 aaPredicted RBP11.18□□□□□ -0.62
LEMD3-202ENST00000539442 TRIM62Q9BVG3 475 aa11.18□□□□□ -0.62
LEMD3-202ENST00000539442 ULBP1Q9BZM6 244 aa11.18□□□□□ -0.62
LEMD3-202ENST00000539442 FBXO44Q9H4M3 255 aa11.18□□□□□ -0.62
LEMD3-202ENST00000539442 ALG13Q9NP73 1137 aaKnown RBP11.18□□□□□ -0.62
LEMD3-202ENST00000539442 ENTPD7Q9NQZ7 604 aa11.18□□□□□ -0.62
LEMD3-202ENST00000539442 YBX2Q9Y2T7 364 aaKnown RBP11.18□□□□□ -0.62
LEMD3-202ENST00000539442 ALG6Q9Y672 507 aa11.18□□□□□ -0.62
LEMD3-202ENST00000539442 C2CD4BA6NLJ0 364 aa11.17□□□□□ -0.62
LEMD3-202ENST00000539442 MIF4GDA9UHW6 222 aaKnown RBP11.17□□□□□ -0.62
LEMD3-202ENST00000539442 H3BNC9 293 aa11.17□□□□□ -0.62
LEMD3-202ENST00000539442 PIK3R2O00459 728 aa11.17□□□□□ -0.62
LEMD3-202ENST00000539442 DPYSL4O14531 572 aa11.17□□□□□ -0.62
LEMD3-202ENST00000539442 LPXNO60711 386 aa11.17□□□□□ -0.62
LEMD3-202ENST00000539442 DAB1O75553 588 aa11.17□□□□□ -0.62
LEMD3-202ENST00000539442 RTN3O95197 1032 aaPredicted RBP11.17□□□□□ -0.62
LEMD3-202ENST00000539442 GJB6O95452 261 aa11.17□□□□□ -0.62
LEMD3-202ENST00000539442 CXCL14O95715 111 aa11.17□□□□□ -0.62
LEMD3-202ENST00000539442 CNPP09543 421 aaKnown RBP11.17□□□□□ -0.62
LEMD3-202ENST00000539442 GPD1P21695 349 aa11.17□□□□□ -0.62
LEMD3-202ENST00000539442 ELF1P32519 619 aa11.17□□□□□ -0.62
LEMD3-202ENST00000539442 RFC1P35251 1148 aaPredicted RBP11.17□□□□□ -0.62
LEMD3-202ENST00000539442 ZNF143P52747 638 aaPredicted RBP11.17□□□□□ -0.62
LEMD3-202ENST00000539442 DUSP4Q13115 394 aa11.17□□□□□ -0.62
LEMD3-202ENST00000539442 DDR2Q16832 855 aa11.17□□□□□ -0.62
LEMD3-202ENST00000539442 MEI1Q5TIA1 1274 aa11.17□□□□□ -0.62
LEMD3-202ENST00000539442 BEND5Q7L4P6 421 aa11.17□□□□□ -0.62
LEMD3-202ENST00000539442 PEX26Q7Z412 305 aa11.17□□□□□ -0.62
LEMD3-202ENST00000539442 NT5DC3Q86UY8 548 aa11.17□□□□□ -0.62
LEMD3-202ENST00000539442 TCEAL8Q8IYN2 117 aa11.17□□□□□ -0.62
LEMD3-202ENST00000539442 NUP93Q8N1F7 819 aa11.17□□□□□ -0.62
LEMD3-202ENST00000539442 TTC9BQ8N6N2 239 aa11.17□□□□□ -0.62
LEMD3-202ENST00000539442 MRPL43Q8N983 215 aaKnown RBP11.17□□□□□ -0.62
LEMD3-202ENST00000539442 JOSD2Q8TAC2 188 aa11.17□□□□□ -0.62
LEMD3-202ENST00000539442 AUTS2Q8WXX7 1259 aa11.17□□□□□ -0.62
LEMD3-202ENST00000539442 GOLGA1Q92805 767 aa11.17□□□□□ -0.62
LEMD3-202ENST00000539442 PIWIL1Q96J94 861 aaKnown RBP11.17□□□□□ -0.62
LEMD3-202ENST00000539442 NCAPGQ9BPX3 1015 aa11.17□□□□□ -0.62
LEMD3-202ENST00000539442 LMAN2LQ9H0V9 348 aa11.17□□□□□ -0.62
LEMD3-202ENST00000539442 CRISPLD1Q9H336 500 aa11.17□□□□□ -0.62
LEMD3-202ENST00000539442 RRAGDQ9NQL2 400 aaPredicted RBP11.17□□□□□ -0.62
LEMD3-202ENST00000539442 IL37Q9NZH6 218 aa11.17□□□□□ -0.62
LEMD3-202ENST00000539442 EHD2Q9NZN4 543 aa11.17□□□□□ -0.62
LEMD3-202ENST00000539442 AMFRQ9UKV5 643 aa11.17□□□□□ -0.62
LEMD3-202ENST00000539442 FAM92AA1XBS5 289 aa11.16□□□□□ -0.62
LEMD3-202ENST00000539442 C2orf71A6NGG8 1288 aa11.16□□□□□ -0.62
LEMD3-202ENST00000539442 RIOK3O14730 519 aaKnown RBP11.16□□□□□ -0.62
LEMD3-202ENST00000539442 FANCGO15287 622 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms