RNA–Protein interactions for RNA: ENST00000539382.5

CTCFL-212, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-212ENST00000539382 CCDC70Q6NSX1 233 aa11.65□□□□□ -0.55
CTCFL-212ENST00000539382 SLC26A9Q7LBE3 791 aa11.65□□□□□ -0.55
CTCFL-212ENST00000539382 TMEM173Q86WV6 379 aaPredicted RBP11.65□□□□□ -0.55
CTCFL-212ENST00000539382 C11orf84Q9BUA3 381 aaPredicted RBP11.65□□□□□ -0.55
CTCFL-212ENST00000539382 KANSL3Q9P2N6 904 aa11.65□□□□□ -0.55
CTCFL-212ENST00000539382 USP18Q9UMW8 372 aa11.65□□□□□ -0.55
CTCFL-212ENST00000539382 NT5C1B-RDH14C9J2C7 533 aa11.64□□□□□ -0.55
CTCFL-212ENST00000539382 H3BQF6 201 aa11.64□□□□□ -0.55
CTCFL-212ENST00000539382 TRUB2O95900 331 aaKnown RBP11.64□□□□□ -0.55
CTCFL-212ENST00000539382 FAM153BP0C7A2 387 aa11.64□□□□□ -0.55
CTCFL-212ENST00000539382 BDNFP23560 247 aa11.64□□□□□ -0.55
CTCFL-212ENST00000539382 PCSK1P29120 753 aa11.64□□□□□ -0.55
CTCFL-212ENST00000539382 CDKN2BP42772 138 aa11.64□□□□□ -0.55
CTCFL-212ENST00000539382 HDAC4P56524 1084 aa11.64□□□□□ -0.55
CTCFL-212ENST00000539382 SNX1Q13596 522 aa11.64□□□□□ -0.55
CTCFL-212ENST00000539382 FAM153CQ494X1 144 aa11.64□□□□□ -0.55
CTCFL-212ENST00000539382 ZFYVE27Q5T4F4 411 aa11.64□□□□□ -0.55
CTCFL-212ENST00000539382 CCDC137Q6PK04 289 aaKnown RBP11.64□□□□□ -0.55
CTCFL-212ENST00000539382 HFE2Q6ZVN8 426 aa11.64□□□□□ -0.55
CTCFL-212ENST00000539382 POLNQ7Z5Q5 900 aa11.64□□□□□ -0.55
CTCFL-212ENST00000539382 TMCO2Q7Z6W1 182 aaPredicted RBP11.64□□□□□ -0.55
CTCFL-212ENST00000539382 RCOR2Q8IZ40 523 aa11.64□□□□□ -0.55
CTCFL-212ENST00000539382 AENQ8WTP8 325 aaKnown RBP11.64□□□□□ -0.55
CTCFL-212ENST00000539382 IFT81Q8WYA0 676 aa11.64□□□□□ -0.55
CTCFL-212ENST00000539382 APBB2Q92870 758 aa11.64□□□□□ -0.55
CTCFL-212ENST00000539382 MAGEB5Q9BZ81 275 aa11.64□□□□□ -0.55
CTCFL-212ENST00000539382 GPR62Q9BZJ7 368 aa11.64□□□□□ -0.55
CTCFL-212ENST00000539382 NEUROG2Q9H2A3 272 aa11.64□□□□□ -0.55
CTCFL-212ENST00000539382 MARCH5Q9NX47 278 aa11.64□□□□□ -0.55
CTCFL-212ENST00000539382 FAM153AQ9UHL3 310 aa11.64□□□□□ -0.55
CTCFL-212ENST00000539382 NFU1Q9UMS0 254 aa11.64□□□□□ -0.55
CTCFL-212ENST00000539382 GOLGA6L10A0A0M3HER8 536 aa11.63□□□□□ -0.55
CTCFL-212ENST00000539382 LRRD1A4D1F6 860 aa11.63□□□□□ -0.55
CTCFL-212ENST00000539382 TMEM189-UBE2V1I3L0A0 370 aa11.63□□□□□ -0.55
CTCFL-212ENST00000539382 COILP38432 576 aaPredicted RBP11.63□□□□□ -0.55
CTCFL-212ENST00000539382 SLC11A1P49279 550 aa11.63□□□□□ -0.55
CTCFL-212ENST00000539382 FAM193AP78312 1265 aa11.63□□□□□ -0.55
CTCFL-212ENST00000539382 DR1Q01658 176 aa11.63□□□□□ -0.55
CTCFL-212ENST00000539382 YWHAHQ04917 246 aaPredicted RBP11.63□□□□□ -0.55
CTCFL-212ENST00000539382 SPOCD1Q6ZMY3 1216 aa11.63□□□□□ -0.55
CTCFL-212ENST00000539382 METTL23Q86XA0 190 aa11.63□□□□□ -0.55
CTCFL-212ENST00000539382 ZDHHC17Q8IUH5 632 aa11.63□□□□□ -0.55
CTCFL-212ENST00000539382 ABI1Q8IZP0 508 aa11.63□□□□□ -0.55
CTCFL-212ENST00000539382 KCTD13Q8WZ19 329 aa11.63□□□□□ -0.55
CTCFL-212ENST00000539382 PLVAPQ9BX97 442 aa11.63□□□□□ -0.55
CTCFL-212ENST00000539382 LRRC19Q9H756 370 aa11.63□□□□□ -0.55
CTCFL-212ENST00000539382 NGRNQ9NPE2 291 aaKnown RBP11.63□□□□□ -0.55
CTCFL-212ENST00000539382 CYLDQ9NQC7 956 aa11.63□□□□□ -0.55
CTCFL-212ENST00000539382 TMEM39AQ9NV64 488 aa11.63□□□□□ -0.55
CTCFL-212ENST00000539382 ASNSD1Q9NWL6 643 aa11.63□□□□□ -0.55
CTCFL-212ENST00000539382 PCYOX1Q9UHG3 505 aa11.63□□□□□ -0.55
CTCFL-212ENST00000539382 LCMT1Q9UIC8 334 aa11.63□□□□□ -0.55
CTCFL-212ENST00000539382 VWA8A3KMH1 1905 aa11.63□□□□□ -0.55
CTCFL-212ENST00000539382 hCG_1818297A0A087WSY0 165 aa11.63□□□□□ -0.55
CTCFL-212ENST00000539382 DPYSL4O14531 572 aa11.63□□□□□ -0.55
CTCFL-212ENST00000539382 DAPK3O43293 454 aa11.63□□□□□ -0.55
CTCFL-212ENST00000539382 RNF8O76064 485 aa11.63□□□□□ -0.55
CTCFL-212ENST00000539382 UPP2O95045 317 aa11.63□□□□□ -0.55
CTCFL-212ENST00000539382 TYMPP19971 482 aa11.63□□□□□ -0.55
CTCFL-212ENST00000539382 PCK1P35558 622 aa11.63□□□□□ -0.55
CTCFL-212ENST00000539382 ACADSBP45954 432 aa11.63□□□□□ -0.55
CTCFL-212ENST00000539382 TKTL1P51854 596 aa11.63□□□□□ -0.55
CTCFL-212ENST00000539382 ACAP1Q15027 740 aa11.63□□□□□ -0.55
CTCFL-212ENST00000539382 CLUL1Q15846 466 aa11.63□□□□□ -0.55
CTCFL-212ENST00000539382 JAMLQ86YT9 394 aa11.63□□□□□ -0.55
CTCFL-212ENST00000539382 C12orf50Q8NA57 414 aaPredicted RBP11.63□□□□□ -0.55
CTCFL-212ENST00000539382 CMASQ8NFW8 434 aaPredicted RBP11.63□□□□□ -0.55
CTCFL-212ENST00000539382 FAM172AQ8WUF8 416 aa11.63□□□□□ -0.55
CTCFL-212ENST00000539382 BCL7CQ8WUZ0 217 aaPredicted RBP11.63□□□□□ -0.55
CTCFL-212ENST00000539382 HSPH1Q92598 858 aa11.63□□□□□ -0.55
CTCFL-212ENST00000539382 FAM193BQ96PV7 902 aaPredicted RBP11.63□□□□□ -0.55
CTCFL-212ENST00000539382 TRIM31Q9BZY9 425 aa11.63□□□□□ -0.55
CTCFL-212ENST00000539382 CSNK1G1Q9HCP0 422 aa11.63□□□□□ -0.55
CTCFL-212ENST00000539382 GPATCH2LQ9NWQ4 482 aa11.63□□□□□ -0.55
CTCFL-212ENST00000539382 SAE1Q9UBE0 346 aaPredicted RBP11.63□□□□□ -0.55
CTCFL-212ENST00000539382 DSEQ9UL01 958 aa11.63□□□□□ -0.55
CTCFL-212ENST00000539382 LAMA3Q16787 3333 aa11.62□□□□□ -0.55
CTCFL-212ENST00000539382 TRIM43BA6NCK2 446 aa11.62□□□□□ -0.55
CTCFL-212ENST00000539382 TBKBP1A7MCY6 615 aa11.62□□□□□ -0.55
CTCFL-212ENST00000539382 TADA2AO75478 443 aa11.62□□□□□ -0.55
CTCFL-212ENST00000539382 FYNP06241 537 aa11.62□□□□□ -0.55
CTCFL-212ENST00000539382 KDELR1P24390 212 aa11.62□□□□□ -0.55
CTCFL-212ENST00000539382 TNFRSF8P28908 595 aa11.62□□□□□ -0.55
CTCFL-212ENST00000539382 CHRNA3P32297 505 aa11.62□□□□□ -0.55
CTCFL-212ENST00000539382 MRPS5P82675 430 aaKnown RBP11.62□□□□□ -0.55
CTCFL-212ENST00000539382 MMRN1Q13201 1228 aa11.62□□□□□ -0.55
CTCFL-212ENST00000539382 CASP8Q14790 479 aa11.62□□□□□ -0.55
CTCFL-212ENST00000539382 CA9Q16790 459 aa11.62□□□□□ -0.55
CTCFL-212ENST00000539382 ZC3H12AQ5D1E8 599 aaKnown RBP11.62□□□□□ -0.55
CTCFL-212ENST00000539382 TFDP3Q5H9I0 405 aa11.62□□□□□ -0.55
CTCFL-212ENST00000539382 RAB41Q5JT25 222 aa11.62□□□□□ -0.55
CTCFL-212ENST00000539382 OTUD1Q5VV17 481 aaPredicted RBP11.62□□□□□ -0.55
CTCFL-212ENST00000539382 SYPL2Q5VXT5 272 aa11.62□□□□□ -0.55
CTCFL-212ENST00000539382 BHLHA9Q7RTU4 235 aa11.62□□□□□ -0.55
CTCFL-212ENST00000539382 MAATS1Q7Z4T9 603 aa11.62□□□□□ -0.55
CTCFL-212ENST00000539382 NPAS4Q8IUM7 802 aa11.62□□□□□ -0.55
CTCFL-212ENST00000539382 IFT20Q8IY31 132 aa11.62□□□□□ -0.55
CTCFL-212ENST00000539382 CCDC26Q8TAB7 109 aa11.62□□□□□ -0.55
CTCFL-212ENST00000539382 SEC14L1Q92503 715 aa11.62□□□□□ -0.55
CTCFL-212ENST00000539382 TRIM43Q96BQ3 446 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms