RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 SKIP12755 728 aa15.49■□□□□ 0.07
ATL3-203ENST00000538786 ACAT1P24752 427 aaKnown RBP15.49■□□□□ 0.07
ATL3-203ENST00000538786 CDH6P55285 790 aa15.49■□□□□ 0.07
ATL3-203ENST00000538786 SLC29A2Q14542 456 aa15.49■□□□□ 0.07
ATL3-203ENST00000538786 PDK2Q15119 407 aa15.49■□□□□ 0.07
ATL3-203ENST00000538786 UPP1Q16831 310 aa15.49■□□□□ 0.07
ATL3-203ENST00000538786 P3H1Q32P28 736 aa15.49■□□□□ 0.07
ATL3-203ENST00000538786 KRT71Q3SY84 523 aa15.49■□□□□ 0.07
ATL3-203ENST00000538786 AGBL2Q5U5Z8 902 aa15.49■□□□□ 0.07
ATL3-203ENST00000538786 PIGZQ86VD9 579 aa15.49■□□□□ 0.07
ATL3-203ENST00000538786 CCDC25Q86WR0 208 aa15.49■□□□□ 0.07
ATL3-203ENST00000538786 MAP7D3Q8IWC1 876 aa15.49■□□□□ 0.07
ATL3-203ENST00000538786 C3orf58Q8NDZ4 430 aa15.49■□□□□ 0.07
ATL3-203ENST00000538786 CLEC4CQ8WTT0 213 aa15.49■□□□□ 0.07
ATL3-203ENST00000538786 GLT1D1Q96MS3 346 aa15.49■□□□□ 0.07
ATL3-203ENST00000538786 ADAM2Q99965 735 aa15.49■□□□□ 0.07
ATL3-203ENST00000538786 C11orf84Q9BUA3 381 aaPredicted RBP15.49■□□□□ 0.07
ATL3-203ENST00000538786 NPR3P17342 541 aa15.49■□□□□ 0.07
ATL3-203ENST00000538786 CAPN2P17655 700 aa15.49■□□□□ 0.07
ATL3-203ENST00000538786 SKOR1P84550 965 aa15.49■□□□□ 0.07
ATL3-203ENST00000538786 TFDP2Q14188 446 aa15.49■□□□□ 0.07
ATL3-203ENST00000538786 DPYSL3Q14195 570 aa15.49■□□□□ 0.07
ATL3-203ENST00000538786 EFHC1Q5JVL4 640 aa15.49■□□□□ 0.07
ATL3-203ENST00000538786 HIBCHQ6NVY1 386 aaPredicted RBP15.49■□□□□ 0.07
ATL3-203ENST00000538786 SCYL2Q6P3W7 929 aa15.49■□□□□ 0.07
ATL3-203ENST00000538786 DSTYKQ6XUX3 929 aa15.49■□□□□ 0.07
ATL3-203ENST00000538786 PAQR9Q6ZVX9 377 aa15.49■□□□□ 0.07
ATL3-203ENST00000538786 HOOK3Q86VS8 718 aa15.49■□□□□ 0.07
ATL3-203ENST00000538786 VSIG1Q86XK7 387 aa15.49■□□□□ 0.07
ATL3-203ENST00000538786 GLIS1Q8NBF1 620 aa15.49■□□□□ 0.07
ATL3-203ENST00000538786 RNF169Q8NCN4 708 aa15.49■□□□□ 0.07
ATL3-203ENST00000538786 KCTD13Q8WZ19 329 aa15.49■□□□□ 0.07
ATL3-203ENST00000538786 CENPIQ92674 756 aaPredicted RBP15.49■□□□□ 0.07
ATL3-203ENST00000538786 TSEN34Q9BSV6 310 aaKnown RBP15.49■□□□□ 0.07
ATL3-203ENST00000538786 TMEM121Q9BTD3 319 aa15.49■□□□□ 0.07
ATL3-203ENST00000538786 MAK16Q9BXY0 300 aaKnown RBP15.49■□□□□ 0.07
ATL3-203ENST00000538786 FOXP3Q9BZS1 431 aa15.49■□□□□ 0.07
ATL3-203ENST00000538786 CENPHQ9H3R5 247 aa15.49■□□□□ 0.07
ATL3-203ENST00000538786 PCDH9Q9HC56 1237 aa15.49■□□□□ 0.07
ATL3-203ENST00000538786 SAE1Q9UBE0 346 aaPredicted RBP15.49■□□□□ 0.07
ATL3-203ENST00000538786 CASTOR2A6NHX0 329 aa15.48■□□□□ 0.07
ATL3-203ENST00000538786 SGK1O00141 431 aa15.48■□□□□ 0.07
ATL3-203ENST00000538786 NDC80O14777 642 aa15.48■□□□□ 0.07
ATL3-203ENST00000538786 MDM4O15151 490 aa15.48■□□□□ 0.07
ATL3-203ENST00000538786 SHOX2O60902 331 aaPredicted RBP15.48■□□□□ 0.07
ATL3-203ENST00000538786 SHBGP04278 402 aa15.48■□□□□ 0.07
ATL3-203ENST00000538786 CHKAP35790 457 aa15.48■□□□□ 0.07
ATL3-203ENST00000538786 HDAC4P56524 1084 aa15.48■□□□□ 0.07
ATL3-203ENST00000538786 MDH1BQ5I0G3 518 aa15.48■□□□□ 0.07
ATL3-203ENST00000538786 KIAA0319Q5VV43 1072 aa15.48■□□□□ 0.07
ATL3-203ENST00000538786 KDM7AQ6ZMT4 941 aa15.48■□□□□ 0.07
ATL3-203ENST00000538786 CROCCP2Q86T23 111 aa15.48■□□□□ 0.07
ATL3-203ENST00000538786 PRUNE1Q86TP1 453 aa15.48■□□□□ 0.07
ATL3-203ENST00000538786 DDX23Q9BUQ8 820 aaKnown RBP15.48■□□□□ 0.07
ATL3-203ENST00000538786 TMEM109Q9BVC6 243 aa15.48■□□□□ 0.07
ATL3-203ENST00000538786 CRTAC1Q9NQ79 661 aa15.48■□□□□ 0.07
ATL3-203ENST00000538786 DNALI1O14645 258 aaPredicted RBP15.47■□□□□ 0.07
ATL3-203ENST00000538786 NR1D1P20393 614 aa15.47■□□□□ 0.07
ATL3-203ENST00000538786 YY1P25490 414 aa15.47■□□□□ 0.07
ATL3-203ENST00000538786 GRIK3Q13003 919 aa15.47■□□□□ 0.07
ATL3-203ENST00000538786 MMRN1Q13201 1228 aa15.47■□□□□ 0.07
ATL3-203ENST00000538786 KRT81Q14533 505 aa15.47■□□□□ 0.07
ATL3-203ENST00000538786 CCDC142Q17RM4 750 aa15.47■□□□□ 0.07
ATL3-203ENST00000538786 CEP128Q6ZU80 1094 aa15.47■□□□□ 0.07
ATL3-203ENST00000538786 RELL1Q8IUW5 271 aa15.47■□□□□ 0.07
ATL3-203ENST00000538786 ZNF784Q8NCA9 323 aaPredicted RBP15.47■□□□□ 0.07
ATL3-203ENST00000538786 SYT15Q9BQS2 421 aa15.47■□□□□ 0.07
ATL3-203ENST00000538786 MED10Q9BTT4 135 aa15.47■□□□□ 0.07
ATL3-203ENST00000538786 ADAM7Q9H2U9 754 aa15.47■□□□□ 0.07
ATL3-203ENST00000538786 CDC42EP4Q9H3Q1 356 aaKnown RBP15.47■□□□□ 0.07
ATL3-203ENST00000538786 A6NNZ2 444 aa15.47■□□□□ 0.07
ATL3-203ENST00000538786 CLDN5O00501 218 aa15.47■□□□□ 0.07
ATL3-203ENST00000538786 POMCP01189 267 aa15.47■□□□□ 0.07
ATL3-203ENST00000538786 ZSCAN5DPP0CG00 497 aa15.47■□□□□ 0.07
ATL3-203ENST00000538786 CKBP12277 381 aa15.47■□□□□ 0.07
ATL3-203ENST00000538786 ETS1P14921 441 aa15.47■□□□□ 0.07
ATL3-203ENST00000538786 PAX3P23760 479 aa15.47■□□□□ 0.07
ATL3-203ENST00000538786 ADIGQ0VDE8 80 aa15.47■□□□□ 0.07
ATL3-203ENST00000538786 GPS1Q13098 491 aa15.47■□□□□ 0.07
ATL3-203ENST00000538786 TUBB8Q3ZCM7 444 aa15.47■□□□□ 0.07
ATL3-203ENST00000538786 DNAJC21Q5F1R6 531 aaKnown RBP15.47■□□□□ 0.07
ATL3-203ENST00000538786 CLEC20AQ6ZU45 233 aa15.47■□□□□ 0.07
ATL3-203ENST00000538786 ZCCHC9Q8N567 271 aaKnown RBP15.47■□□□□ 0.07
ATL3-203ENST00000538786 SPATA18Q8TC71 538 aa15.47■□□□□ 0.07
ATL3-203ENST00000538786 RNF157Q96PX1 679 aa15.47■□□□□ 0.07
ATL3-203ENST00000538786 PAAF1Q9BRP4 392 aa15.47■□□□□ 0.07
ATL3-203ENST00000538786 SNRNP25Q9BV90 132 aaKnown RBP15.47■□□□□ 0.07
ATL3-203ENST00000538786 CAPS2Q9BXY5 557 aa15.47■□□□□ 0.07
ATL3-203ENST00000538786 KRT82Q9NSB4 513 aa15.47■□□□□ 0.07
ATL3-203ENST00000538786 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.47■□□□□ 0.07
ATL3-203ENST00000538786 CDH9Q9ULB4 789 aa15.47■□□□□ 0.07
ATL3-203ENST00000538786 TPX2Q9ULW0 747 aaKnown RBP15.47■□□□□ 0.07
ATL3-203ENST00000538786 ZNF487B1APH4 448 aa15.46■□□□□ 0.07
ATL3-203ENST00000538786 MCF2LO15068 1137 aa15.46■□□□□ 0.07
ATL3-203ENST00000538786 BEST1O76090 585 aa15.46■□□□□ 0.07
ATL3-203ENST00000538786 INHAP05111 366 aa15.46■□□□□ 0.07
ATL3-203ENST00000538786 FAM200BP0CF97 657 aa15.46■□□□□ 0.07
ATL3-203ENST00000538786 ODC1P11926 461 aa15.46■□□□□ 0.07
ATL3-203ENST00000538786 PECAM1P16284 738 aaPredicted RBP15.46■□□□□ 0.07
ATL3-203ENST00000538786 TFE3P19532 575 aaPredicted RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms