RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 CDH6P55285 790 aa21.35■■□□□ 1.01
DDX55-205ENST00000538744 RAB6CQ53S08 254 aa21.35■■□□□ 1.01
DDX55-205ENST00000538744 DENND2CQ68D51 928 aa21.35■■□□□ 1.01
DDX55-205ENST00000538744 LHX8Q68G74 356 aa21.35■■□□□ 1.01
DDX55-205ENST00000538744 PIGZQ86VD9 579 aa21.35■■□□□ 1.01
DDX55-205ENST00000538744 ATP6V1G3Q96LB4 118 aa21.35■■□□□ 1.01
DDX55-205ENST00000538744 SYT15Q9BQS2 421 aa21.35■■□□□ 1.01
DDX55-205ENST00000538744 RAB6CQ9H0N0 254 aa21.35■■□□□ 1.01
DDX55-205ENST00000538744 EPB41L4BQ9H329 900 aa21.35■■□□□ 1.01
DDX55-205ENST00000538744 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.35■■□□□ 1.01
DDX55-205ENST00000538744 A0A1W2PQ45 241 aaPredicted RBP21.34■■□□□ 1.01
DDX55-205ENST00000538744 A0A1W2PQY0 241 aa21.34■■□□□ 1.01
DDX55-205ENST00000538744 HMGB1P1B2RPK0 211 aaPredicted RBP21.34■■□□□ 1.01
DDX55-205ENST00000538744 CLDN5O00501 218 aa21.34■■□□□ 1.01
DDX55-205ENST00000538744 POMCP01189 267 aa21.34■■□□□ 1.01
DDX55-205ENST00000538744 NUDT17P0C025 328 aa21.34■■□□□ 1.01
DDX55-205ENST00000538744 ARSEP51690 589 aa21.34■■□□□ 1.01
DDX55-205ENST00000538744 OTUD4Q01804 1114 aaKnown RBP21.34■■□□□ 1.01
DDX55-205ENST00000538744 PLCB3Q01970 1234 aa21.34■■□□□ 1.01
DDX55-205ENST00000538744 PDK2Q15119 407 aa21.34■■□□□ 1.01
DDX55-205ENST00000538744 EFHC1Q5JVL4 640 aa21.34■■□□□ 1.01
DDX55-205ENST00000538744 IZUMO3Q5VZ72 239 aa21.34■■□□□ 1.01
DDX55-205ENST00000538744 SCYL2Q6P3W7 929 aa21.34■■□□□ 1.01
DDX55-205ENST00000538744 ECHDC2Q86YB7 292 aa21.34■■□□□ 1.01
DDX55-205ENST00000538744 MAP7D3Q8IWC1 876 aa21.34■■□□□ 1.01
DDX55-205ENST00000538744 ACTL9Q8TC94 416 aa21.34■■□□□ 1.01
DDX55-205ENST00000538744 TRPV6Q9H1D0 765 aa21.34■■□□□ 1.01
DDX55-205ENST00000538744 CRTAC1Q9NQ79 661 aa21.34■■□□□ 1.01
DDX55-205ENST00000538744 APOC4-APOC2K7ER74 178 aa21.33■■□□□ 1.01
DDX55-205ENST00000538744 FKTNO75072 461 aa21.33■■□□□ 1.01
DDX55-205ENST00000538744 APOC2P02655 101 aa21.33■■□□□ 1.01
DDX55-205ENST00000538744 ODC1P11926 461 aa21.33■■□□□ 1.01
DDX55-205ENST00000538744 PAX3P23760 479 aa21.33■■□□□ 1.01
DDX55-205ENST00000538744 IFFO1Q0D2I5 559 aa21.33■■□□□ 1.01
DDX55-205ENST00000538744 TFDP2Q14188 446 aa21.33■■□□□ 1.01
DDX55-205ENST00000538744 KRT81Q14533 505 aa21.33■■□□□ 1.01
DDX55-205ENST00000538744 CCDC142Q17RM4 750 aa21.33■■□□□ 1.01
DDX55-205ENST00000538744 KIAA0319Q5VV43 1072 aa21.33■■□□□ 1.01
DDX55-205ENST00000538744 PAQR9Q6ZVX9 377 aa21.33■■□□□ 1.01
DDX55-205ENST00000538744 CCDC25Q86WR0 208 aa21.33■■□□□ 1.01
DDX55-205ENST00000538744 SLC43A3Q8NBI5 491 aa21.33■■□□□ 1.01
DDX55-205ENST00000538744 SPATA18Q8TC71 538 aa21.33■■□□□ 1.01
DDX55-205ENST00000538744 KCTD13Q8WZ19 329 aa21.33■■□□□ 1.01
DDX55-205ENST00000538744 UROC1Q96N76 676 aa21.33■■□□□ 1.01
DDX55-205ENST00000538744 PAAF1Q9BRP4 392 aa21.33■■□□□ 1.01
DDX55-205ENST00000538744 MAK16Q9BXY0 300 aaKnown RBP21.33■■□□□ 1.01
DDX55-205ENST00000538744 CDH9Q9ULB4 789 aa21.33■■□□□ 1.01
DDX55-205ENST00000538744 FAM200BP0CF97 657 aa21.32■■□□□ 1
DDX55-205ENST00000538744 LMAN1P49257 510 aa21.32■■□□□ 1
DDX55-205ENST00000538744 PRMT2P55345 433 aa21.32■■□□□ 1
DDX55-205ENST00000538744 ADIGQ0VDE8 80 aa21.32■■□□□ 1
DDX55-205ENST00000538744 TUSC3Q13454 348 aa21.32■■□□□ 1
DDX55-205ENST00000538744 DPYSL3Q14195 570 aa21.32■■□□□ 1
DDX55-205ENST00000538744 TIGD5Q53EQ6 642 aa21.32■■□□□ 1
DDX55-205ENST00000538744 KCTD16Q68DU8 428 aa21.32■■□□□ 1
DDX55-205ENST00000538744 CLEC20AQ6ZU45 233 aa21.32■■□□□ 1
DDX55-205ENST00000538744 TRMT10CQ7L0Y3 403 aaKnown RBP21.32■■□□□ 1
DDX55-205ENST00000538744 ZNF598Q86UK7 904 aaKnown RBP21.32■■□□□ 1
DDX55-205ENST00000538744 CENPIQ92674 756 aaPredicted RBP21.32■■□□□ 1
DDX55-205ENST00000538744 C11orf84Q9BUA3 381 aaPredicted RBP21.32■■□□□ 1
DDX55-205ENST00000538744 DDX23Q9BUQ8 820 aaKnown RBP21.32■■□□□ 1
DDX55-205ENST00000538744 SEMA4AQ9H3S1 761 aa21.32■■□□□ 1
DDX55-205ENST00000538744 STARD7Q9NQZ5 370 aa21.32■■□□□ 1
DDX55-205ENST00000538744 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.32■■□□□ 1
DDX55-205ENST00000538744 INPP5FQ9Y2H2 1132 aa21.32■■□□□ 1
DDX55-205ENST00000538744 TIMM13Q9Y5L4 95 aaPredicted RBP21.32■■□□□ 1
DDX55-205ENST00000538744 SGK1O00141 431 aa21.32■■□□□ 1
DDX55-205ENST00000538744 NDC80O14777 642 aa21.32■■□□□ 1
DDX55-205ENST00000538744 MDM4O15151 490 aa21.32■■□□□ 1
DDX55-205ENST00000538744 PCSK1P29120 753 aa21.32■■□□□ 1
DDX55-205ENST00000538744 GRK4P32298 578 aa21.32■■□□□ 1
DDX55-205ENST00000538744 HDAC4P56524 1084 aa21.32■■□□□ 1
DDX55-205ENST00000538744 DMTNQ08495 405 aa21.32■■□□□ 1
DDX55-205ENST00000538744 P3H1Q32P28 736 aa21.32■■□□□ 1
DDX55-205ENST00000538744 ZNF771Q7L3S4 317 aaPredicted RBP21.32■■□□□ 1
DDX55-205ENST00000538744 VSIG1Q86XK7 387 aa21.32■■□□□ 1
DDX55-205ENST00000538744 SNRNP25Q9BV90 132 aaKnown RBP21.32■■□□□ 1
DDX55-205ENST00000538744 LRRC4Q9HBW1 653 aa21.32■■□□□ 1
DDX55-205ENST00000538744 PCDH9Q9HC56 1237 aa21.32■■□□□ 1
DDX55-205ENST00000538744 AAASQ9NRG9 546 aa21.32■■□□□ 1
DDX55-205ENST00000538744 KRT82Q9NSB4 513 aa21.32■■□□□ 1
DDX55-205ENST00000538744 INPPL1O15357 1258 aa21.31■■□□□ 1
DDX55-205ENST00000538744 VEGFBP49765 207 aa21.31■■□□□ 1
DDX55-205ENST00000538744 MMRN1Q13201 1228 aa21.31■■□□□ 1
DDX55-205ENST00000538744 AGBL2Q5U5Z8 902 aa21.31■■□□□ 1
DDX55-205ENST00000538744 TRAF7Q6Q0C0 670 aa21.31■■□□□ 1
DDX55-205ENST00000538744 METTL23Q86XA0 190 aa21.31■■□□□ 1
DDX55-205ENST00000538744 SH2D3CQ8N5H7 860 aa21.31■■□□□ 1
DDX55-205ENST00000538744 TMEM121Q9BTD3 319 aa21.31■■□□□ 1
DDX55-205ENST00000538744 FOXP3Q9BZS1 431 aa21.31■■□□□ 1
DDX55-205ENST00000538744 CENPHQ9H3R5 247 aa21.31■■□□□ 1
DDX55-205ENST00000538744 RGS18Q9NS28 235 aa21.31■■□□□ 1
DDX55-205ENST00000538744 SAE1Q9UBE0 346 aaPredicted RBP21.31■■□□□ 1
DDX55-205ENST00000538744 PTCH2Q9Y6C5 1203 aa21.31■■□□□ 1
DDX55-205ENST00000538744 PCNTO95613 3336 aa21.31■■□□□ 1
DDX55-205ENST00000538744 DNALI1O14645 258 aaPredicted RBP21.3■■□□□ 1
DDX55-205ENST00000538744 RIPK2O43353 540 aa21.3■■□□□ 1
DDX55-205ENST00000538744 BEST1O76090 585 aa21.3■■□□□ 1
DDX55-205ENST00000538744 B3GAT3O94766 335 aa21.3■■□□□ 1
DDX55-205ENST00000538744 SLC29A2Q14542 456 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms