RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 TXNRD2Q9NNW7 524 aa12.48□□□□□ -0.41
CPNE8-203ENST00000538596 FBXO6Q9NRD1 293 aaPredicted RBP12.48□□□□□ -0.41
CPNE8-203ENST00000538596 DNAH12Q6ZR08 3092 aa12.48□□□□□ -0.41
CPNE8-203ENST00000538596 C2CD2LO14523 706 aa12.48□□□□□ -0.41
CPNE8-203ENST00000538596 BGNP21810 368 aa12.48□□□□□ -0.41
CPNE8-203ENST00000538596 CTC1Q2NKJ3 1217 aa12.48□□□□□ -0.41
CPNE8-203ENST00000538596 ANKRD20A2Q5SQ80 823 aa12.48□□□□□ -0.41
CPNE8-203ENST00000538596 ANKRD20A1Q5TYW2 823 aa12.48□□□□□ -0.41
CPNE8-203ENST00000538596 ANKRD20A3Q5VUR7 823 aa12.48□□□□□ -0.41
CPNE8-203ENST00000538596 FYB2Q5VWT5 728 aa12.48□□□□□ -0.41
CPNE8-203ENST00000538596 CDHR3Q6ZTQ4 885 aa12.48□□□□□ -0.41
CPNE8-203ENST00000538596 FAM183BPQ6ZVS7 135 aa12.48□□□□□ -0.41
CPNE8-203ENST00000538596 RPAINQ86UA6 219 aa12.48□□□□□ -0.41
CPNE8-203ENST00000538596 FAF2Q96CS3 445 aa12.48□□□□□ -0.41
CPNE8-203ENST00000538596 CYTH2Q99418 400 aa12.48□□□□□ -0.41
CPNE8-203ENST00000538596 CXCL16Q9H2A7 254 aa12.48□□□□□ -0.41
CPNE8-203ENST00000538596 IFT122Q9HBG6 1241 aa12.48□□□□□ -0.41
CPNE8-203ENST00000538596 RAB6BQ9NRW1 208 aa12.48□□□□□ -0.41
CPNE8-203ENST00000538596 CFAP69A5D8W1 941 aa12.48□□□□□ -0.41
CPNE8-203ENST00000538596 CXorf49A8MYA2 514 aaPredicted RBP12.48□□□□□ -0.41
CPNE8-203ENST00000538596 PEX11AO75192 247 aa12.48□□□□□ -0.41
CPNE8-203ENST00000538596 KCNJ11Q14654 390 aa12.48□□□□□ -0.41
CPNE8-203ENST00000538596 NOMO1Q15155 1222 aa12.48□□□□□ -0.41
CPNE8-203ENST00000538596 PARP6Q2NL67 630 aa12.48□□□□□ -0.41
CPNE8-203ENST00000538596 Q3C1V9 767 aa12.48□□□□□ -0.41
CPNE8-203ENST00000538596 NOL9Q5SY16 702 aaKnown RBP12.48□□□□□ -0.41
CPNE8-203ENST00000538596 WDR78Q5VTH9 848 aa12.48□□□□□ -0.41
CPNE8-203ENST00000538596 MIPEPQ99797 713 aa12.48□□□□□ -0.41
CPNE8-203ENST00000538596 MAGEB5Q9BZ81 275 aa12.48□□□□□ -0.41
CPNE8-203ENST00000538596 RSAD1Q9HA92 442 aa12.48□□□□□ -0.41
CPNE8-203ENST00000538596 PPCSQ9HAB8 311 aa12.48□□□□□ -0.41
CPNE8-203ENST00000538596 SSU72Q9NP77 194 aaKnown RBP12.48□□□□□ -0.41
CPNE8-203ENST00000538596 WDR35Q9P2L0 1181 aa12.48□□□□□ -0.41
CPNE8-203ENST00000538596 HEY2Q9UBP5 337 aa12.48□□□□□ -0.41
CPNE8-203ENST00000538596 TEX264Q9Y6I9 313 aa12.48□□□□□ -0.41
CPNE8-203ENST00000538596 TRIP11Q15643 1979 aa12.47□□□□□ -0.41
CPNE8-203ENST00000538596 A0A087WZ62 844 aa12.47□□□□□ -0.41
CPNE8-203ENST00000538596 IRF6O14896 467 aa12.47□□□□□ -0.41
CPNE8-203ENST00000538596 KCNN4O15554 427 aa12.47□□□□□ -0.41
CPNE8-203ENST00000538596 UGT1A9O60656 530 aa12.47□□□□□ -0.41
CPNE8-203ENST00000538596 LGR5O75473 907 aa12.47□□□□□ -0.41
CPNE8-203ENST00000538596 ATP5HO75947 161 aa12.47□□□□□ -0.41
CPNE8-203ENST00000538596 IL4RP24394 825 aa12.47□□□□□ -0.41
CPNE8-203ENST00000538596 ZNF143P52747 638 aaPredicted RBP12.47□□□□□ -0.41
CPNE8-203ENST00000538596 NDST1P52848 882 aa12.47□□□□□ -0.41
CPNE8-203ENST00000538596 ZNF200P98182 395 aaPredicted RBP12.47□□□□□ -0.41
CPNE8-203ENST00000538596 CA9Q16790 459 aa12.47□□□□□ -0.41
CPNE8-203ENST00000538596 SLC45A4Q5BKX6 768 aa12.47□□□□□ -0.41
CPNE8-203ENST00000538596 RFWD3Q6PCD5 774 aa12.47□□□□□ -0.41
CPNE8-203ENST00000538596 CTAGE3PQ8IX95 158 aa12.47□□□□□ -0.41
CPNE8-203ENST00000538596 HPDLQ96IR7 371 aa12.47□□□□□ -0.41
CPNE8-203ENST00000538596 FDXACB1Q9BRP7 624 aaPredicted RBP12.47□□□□□ -0.41
CPNE8-203ENST00000538596 TSSK1BQ9BXA7 367 aa12.47□□□□□ -0.41
CPNE8-203ENST00000538596 UGT1A7Q9HAW7 530 aa12.47□□□□□ -0.41
CPNE8-203ENST00000538596 UGT1A10Q9HAW8 530 aa12.47□□□□□ -0.41
CPNE8-203ENST00000538596 UGT1A8Q9HAW9 530 aa12.47□□□□□ -0.41
CPNE8-203ENST00000538596 USP29Q9HBJ7 922 aa12.47□□□□□ -0.41
CPNE8-203ENST00000538596 ARL8BQ9NVJ2 186 aa12.47□□□□□ -0.41
CPNE8-203ENST00000538596 ASNSD1Q9NWL6 643 aa12.47□□□□□ -0.41
CPNE8-203ENST00000538596 SLC5A4Q9NY91 659 aa12.47□□□□□ -0.41
CPNE8-203ENST00000538596 FETUBQ9UGM5 382 aa12.47□□□□□ -0.41
CPNE8-203ENST00000538596 TNFSF13BQ9Y275 285 aa12.47□□□□□ -0.41
CPNE8-203ENST00000538596 IKBKGQ9Y6K9 419 aa12.47□□□□□ -0.41
CPNE8-203ENST00000538596 PTPRFP10586 1907 aa12.47□□□□□ -0.41
CPNE8-203ENST00000538596 PAPPA2Q9BXP8 1791 aa12.47□□□□□ -0.41
CPNE8-203ENST00000538596 C2CD4BA6NLJ0 364 aa12.47□□□□□ -0.41
CPNE8-203ENST00000538596 CNMDO75829 334 aa12.47□□□□□ -0.41
CPNE8-203ENST00000538596 HMGCRP04035 888 aa12.47□□□□□ -0.41
CPNE8-203ENST00000538596 INHBAP08476 426 aa12.47□□□□□ -0.41
CPNE8-203ENST00000538596 NEFHP12036 1026 aa12.47□□□□□ -0.41
CPNE8-203ENST00000538596 GPD1P21695 349 aa12.47□□□□□ -0.41
CPNE8-203ENST00000538596 RBL1P28749 1068 aa12.47□□□□□ -0.41
CPNE8-203ENST00000538596 ETV4P43268 484 aa12.47□□□□□ -0.41
CPNE8-203ENST00000538596 GABRB2P47870 512 aa12.47□□□□□ -0.41
CPNE8-203ENST00000538596 SLC10A6Q3KNW5 377 aa12.47□□□□□ -0.41
CPNE8-203ENST00000538596 SH2D5Q6ZV89 423 aa12.47□□□□□ -0.41
CPNE8-203ENST00000538596 TTC7BQ86TV6 843 aa12.47□□□□□ -0.41
CPNE8-203ENST00000538596 PPM1NQ8N819 430 aa12.47□□□□□ -0.41
CPNE8-203ENST00000538596 SLC44A1Q8WWI5 657 aa12.47□□□□□ -0.41
CPNE8-203ENST00000538596 LPIN3Q9BQK8 851 aa12.47□□□□□ -0.41
CPNE8-203ENST00000538596 MECRQ9BV79 373 aa12.47□□□□□ -0.41
CPNE8-203ENST00000538596 DENND2DQ9H6A0 471 aaPredicted RBP12.47□□□□□ -0.41
CPNE8-203ENST00000538596 KCNK13Q9HB14 408 aa12.47□□□□□ -0.41
CPNE8-203ENST00000538596 NGRNQ9NPE2 291 aaKnown RBP12.47□□□□□ -0.41
CPNE8-203ENST00000538596 RNF19AQ9NV58 838 aa12.47□□□□□ -0.41
CPNE8-203ENST00000538596 TSPAN16Q9UKR8 245 aa12.47□□□□□ -0.41
CPNE8-203ENST00000538596 NDC80O14777 642 aa12.46□□□□□ -0.41
CPNE8-203ENST00000538596 TM9SF1O15321 606 aa12.46□□□□□ -0.41
CPNE8-203ENST00000538596 VTNP04004 478 aa12.46□□□□□ -0.41
CPNE8-203ENST00000538596 PFKMP08237 780 aa12.46□□□□□ -0.41
CPNE8-203ENST00000538596 TROVE2P10155 538 aaKnown RBP eCLIP12.46□□□□□ -0.41
CPNE8-203ENST00000538596 SERPINB3P29508 390 aa12.46□□□□□ -0.41
CPNE8-203ENST00000538596 NEK3P51956 506 aa12.46□□□□□ -0.41
CPNE8-203ENST00000538596 PLPPR4Q7Z2D5 763 aa12.46□□□□□ -0.41
CPNE8-203ENST00000538596 PLD5Q8N7P1 536 aa12.46□□□□□ -0.41
CPNE8-203ENST00000538596 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.46□□□□□ -0.41
CPNE8-203ENST00000538596 INPP5DQ92835 1189 aa12.46□□□□□ -0.41
CPNE8-203ENST00000538596 MIEF2Q96C03 454 aa12.46□□□□□ -0.41
CPNE8-203ENST00000538596 OTUD5Q96G74 571 aa12.46□□□□□ -0.41
CPNE8-203ENST00000538596 FRMD8P1Q9BZ68 369 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms