RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 KYAT3Q6YP21 454 aaKnown RBP7.15□□□□□ -1.26
SORT1-209ENST00000538502 DEFB107AQ8IZN7 70 aa7.15□□□□□ -1.26
SORT1-209ENST00000538502 BORCS5Q969J3 196 aa7.15□□□□□ -1.26
SORT1-209ENST00000538502 TJP2Q9UDY2 1190 aa7.15□□□□□ -1.26
SORT1-209ENST00000538502 SLC30A1Q9Y6M5 507 aa7.15□□□□□ -1.26
SORT1-209ENST00000538502 GLI2P10070 1586 aa7.15□□□□□ -1.27
SORT1-209ENST00000538502 ZBTB39O15060 712 aa7.15□□□□□ -1.27
SORT1-209ENST00000538502 CLOCKO15516 846 aa7.15□□□□□ -1.27
SORT1-209ENST00000538502 MYL4P12829 197 aa7.15□□□□□ -1.27
SORT1-209ENST00000538502 CPA3P15088 417 aa7.15□□□□□ -1.27
SORT1-209ENST00000538502 GCLCP48506 637 aaPredicted RBP7.15□□□□□ -1.27
SORT1-209ENST00000538502 MTTPP55157 894 aa7.15□□□□□ -1.27
SORT1-209ENST00000538502 MYL6P60660 151 aa7.15□□□□□ -1.27
SORT1-209ENST00000538502 OVGP1Q12889 678 aa7.15□□□□□ -1.27
SORT1-209ENST00000538502 PARP6Q2NL67 630 aa7.15□□□□□ -1.27
SORT1-209ENST00000538502 XRRA1Q6P2D8 792 aa7.15□□□□□ -1.27
SORT1-209ENST00000538502 PDPRQ8NCN5 879 aa7.15□□□□□ -1.27
SORT1-209ENST00000538502 SLC30A5Q8TAD4 765 aa7.15□□□□□ -1.27
SORT1-209ENST00000538502 DGCR14Q96DF8 476 aaKnown RBP7.15□□□□□ -1.27
SORT1-209ENST00000538502 THUMPD3Q9BV44 507 aaKnown RBP7.15□□□□□ -1.27
SORT1-209ENST00000538502 OSBPL10Q9BXB5 764 aa7.15□□□□□ -1.27
SORT1-209ENST00000538502 IARS2Q9NSE4 1012 aaKnown RBP7.15□□□□□ -1.27
SORT1-209ENST00000538502 MAP3K20Q9NYL2 800 aaKnown RBP7.15□□□□□ -1.27
SORT1-209ENST00000538502 RRN3Q9NYV6 651 aa7.15□□□□□ -1.27
SORT1-209ENST00000538502 TAF4O00268 1085 aa7.15□□□□□ -1.27
SORT1-209ENST00000538502 LCP1P13796 627 aa7.15□□□□□ -1.27
SORT1-209ENST00000538502 ADORA2BP29275 332 aa7.15□□□□□ -1.27
SORT1-209ENST00000538502 RABL6Q3YEC7 729 aaPredicted RBP7.15□□□□□ -1.27
SORT1-209ENST00000538502 DENND1BQ6P3S1 775 aa7.15□□□□□ -1.27
SORT1-209ENST00000538502 STOX1Q6ZVD7 989 aa7.15□□□□□ -1.27
SORT1-209ENST00000538502 SULF1Q8IWU6 871 aa7.15□□□□□ -1.27
SORT1-209ENST00000538502 DHRSXQ8N5I4 330 aa7.15□□□□□ -1.27
SORT1-209ENST00000538502 STARD8Q92502 1023 aa7.15□□□□□ -1.27
SORT1-209ENST00000538502 SEC31BQ9NQW1 1179 aa7.15□□□□□ -1.27
SORT1-209ENST00000538502 SLC39A10Q9ULF5 831 aa7.15□□□□□ -1.27
SORT1-209ENST00000538502 RUVBL2Q9Y230 463 aaKnown RBP7.15□□□□□ -1.27
SORT1-209ENST00000538502 PEX1O43933 1283 aa7.14□□□□□ -1.27
SORT1-209ENST00000538502 PGK2P07205 417 aa7.14□□□□□ -1.27
SORT1-209ENST00000538502 TFE3P19532 575 aaPredicted RBP7.14□□□□□ -1.27
SORT1-209ENST00000538502 ACAT1P24752 427 aaKnown RBP7.14□□□□□ -1.27
SORT1-209ENST00000538502 DNAJB2P25686 324 aa7.14□□□□□ -1.27
SORT1-209ENST00000538502 PON1P27169 355 aa7.14□□□□□ -1.27
SORT1-209ENST00000538502 STK4Q13043 487 aa7.14□□□□□ -1.27
SORT1-209ENST00000538502 TBX2Q13207 712 aaPredicted RBP7.14□□□□□ -1.27
SORT1-209ENST00000538502 RIPK1Q13546 671 aa7.14□□□□□ -1.27
SORT1-209ENST00000538502 QRICH1Q2TAL8 776 aa7.14□□□□□ -1.27
SORT1-209ENST00000538502 MRNIPQ6NTE8 343 aa7.14□□□□□ -1.27
SORT1-209ENST00000538502 MOXD1Q6UVY6 613 aa7.14□□□□□ -1.27
SORT1-209ENST00000538502 CAMK1DQ8IU85 385 aa7.14□□□□□ -1.27
SORT1-209ENST00000538502 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.14□□□□□ -1.27
SORT1-209ENST00000538502 TATDN2Q93075 761 aa7.14□□□□□ -1.27
SORT1-209ENST00000538502 PPP1R10Q96QC0 940 aaKnown RBP7.14□□□□□ -1.27
SORT1-209ENST00000538502 PHACTR1Q9C0D0 580 aa7.14□□□□□ -1.27
SORT1-209ENST00000538502 HDHD2Q9H0R4 259 aa7.14□□□□□ -1.27
SORT1-209ENST00000538502 SH3GLB1Q9Y371 365 aa7.14□□□□□ -1.27
SORT1-209ENST00000538502 HBS1LQ9Y450 684 aaKnown RBP7.14□□□□□ -1.27
SORT1-209ENST00000538502 FCHO1O14526 889 aa7.14□□□□□ -1.27
SORT1-209ENST00000538502 IDH3BO43837 385 aa7.14□□□□□ -1.27
SORT1-209ENST00000538502 TSC22D2O75157 780 aa7.14□□□□□ -1.27
SORT1-209ENST00000538502 UNC5CO95185 931 aa7.14□□□□□ -1.27
SORT1-209ENST00000538502 PDGFRBP09619 1106 aa7.14□□□□□ -1.27
SORT1-209ENST00000538502 NMT1P30419 496 aaKnown RBP7.14□□□□□ -1.27
SORT1-209ENST00000538502 BROXQ5VW32 411 aa7.14□□□□□ -1.27
SORT1-209ENST00000538502 KLHL17Q6TDP4 642 aa7.14□□□□□ -1.27
SORT1-209ENST00000538502 LRRC49Q8IUZ0 686 aa7.14□□□□□ -1.27
SORT1-209ENST00000538502 ULK2Q8IYT8 1036 aa7.14□□□□□ -1.27
SORT1-209ENST00000538502 RTKN2Q8IZC4 609 aa7.14□□□□□ -1.27
SORT1-209ENST00000538502 FAM71DQ8N9W8 422 aa7.14□□□□□ -1.27
SORT1-209ENST00000538502 ACTRT2Q8TDY3 377 aa7.14□□□□□ -1.27
SORT1-209ENST00000538502 NOL6Q9H6R4 1146 aaKnown RBP7.14□□□□□ -1.27
SORT1-209ENST00000538502 RGS18Q9NS28 235 aa7.14□□□□□ -1.27
SORT1-209ENST00000538502 ZSCAN32Q9NX65 697 aa7.14□□□□□ -1.27
SORT1-209ENST00000538502 NAALADL1Q9UQQ1 740 aa7.14□□□□□ -1.27
SORT1-209ENST00000538502 SNAP91O60641 907 aa7.14□□□□□ -1.27
SORT1-209ENST00000538502 PRKCBP05771 671 aa7.14□□□□□ -1.27
SORT1-209ENST00000538502 TTLL4Q14679 1199 aa7.14□□□□□ -1.27
SORT1-209ENST00000538502 CYP51A1Q16850 503 aa7.14□□□□□ -1.27
SORT1-209ENST00000538502 XKR3Q5GH77 459 aa7.14□□□□□ -1.27
SORT1-209ENST00000538502 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.14□□□□□ -1.27
SORT1-209ENST00000538502 CKAP2Q8WWK9 683 aa7.14□□□□□ -1.27
SORT1-209ENST00000538502 ZNF669Q96BR6 464 aaPredicted RBP7.14□□□□□ -1.27
SORT1-209ENST00000538502 KIF12Q96FN5 646 aa7.14□□□□□ -1.27
SORT1-209ENST00000538502 NIF3L1Q9GZT8 377 aa7.14□□□□□ -1.27
SORT1-209ENST00000538502 LRMDAQ9H2I8 198 aa7.14□□□□□ -1.27
SORT1-209ENST00000538502 TCF7L2Q9NQB0 619 aa7.14□□□□□ -1.27
SORT1-209ENST00000538502 AVENQ9NQS1 362 aaPredicted RBP7.14□□□□□ -1.27
SORT1-209ENST00000538502 ANKEF1Q9NU02 776 aa7.14□□□□□ -1.27
SORT1-209ENST00000538502 KLHL11Q9NVR0 708 aa7.14□□□□□ -1.27
SORT1-209ENST00000538502 VAV3Q9UKW4 847 aa7.14□□□□□ -1.27
SORT1-209ENST00000538502 ZBTB1Q9Y2K1 713 aa7.14□□□□□ -1.27
SORT1-209ENST00000538502 IGSF9BQ9UPX0 1349 aa7.14□□□□□ -1.27
SORT1-209ENST00000538502 PNPLA6Q8IY17 1366 aa7.14□□□□□ -1.27
SORT1-209ENST00000538502 UBDO15205 165 aa7.14□□□□□ -1.27
SORT1-209ENST00000538502 MSH3P20585 1137 aa7.14□□□□□ -1.27
SORT1-209ENST00000538502 RPA1P27694 616 aa7.14□□□□□ -1.27
SORT1-209ENST00000538502 GJA8P48165 433 aa7.14□□□□□ -1.27
SORT1-209ENST00000538502 FOXD4Q12950 439 aaPredicted RBP7.14□□□□□ -1.27
SORT1-209ENST00000538502 SPANXN3Q5MJ09 141 aa7.14□□□□□ -1.27
SORT1-209ENST00000538502 NT5DC1Q5TFE4 455 aa7.14□□□□□ -1.27
SORT1-209ENST00000538502 CWF19L1Q69YN2 538 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms