RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 H3BRB1 525 aa9.67□□□□□ -0.86
DDB1-211ENST00000538280 RASSF9O75901 435 aa9.67□□□□□ -0.86
DDB1-211ENST00000538280 RNF8O76064 485 aa9.67□□□□□ -0.86
DDB1-211ENST00000538280 CD48P09326 243 aa9.67□□□□□ -0.86
DDB1-211ENST00000538280 ZNF286BP0CG31 522 aa9.67□□□□□ -0.86
DDB1-211ENST00000538280 NDST1P52848 882 aa9.67□□□□□ -0.86
DDB1-211ENST00000538280 ATN1P54259 1190 aaPredicted RBP9.67□□□□□ -0.86
DDB1-211ENST00000538280 GDF10P55107 478 aa9.67□□□□□ -0.86
DDB1-211ENST00000538280 GPX6P59796 221 aa9.67□□□□□ -0.86
DDB1-211ENST00000538280 PPARDQ03181 441 aa9.67□□□□□ -0.86
DDB1-211ENST00000538280 ORC1Q13415 861 aa9.67□□□□□ -0.86
DDB1-211ENST00000538280 FASTKD3Q14CZ7 662 aaKnown RBP9.67□□□□□ -0.86
DDB1-211ENST00000538280 DUSP28Q4G0W2 176 aa9.67□□□□□ -0.86
DDB1-211ENST00000538280 ZC3H12AQ5D1E8 599 aaKnown RBP9.67□□□□□ -0.86
DDB1-211ENST00000538280 ZFYVE27Q5T4F4 411 aa9.67□□□□□ -0.86
DDB1-211ENST00000538280 RNF187Q5TA31 235 aaPredicted RBP9.67□□□□□ -0.86
DDB1-211ENST00000538280 ARHGAP17Q68EM7 881 aa9.67□□□□□ -0.86
DDB1-211ENST00000538280 RGS9BPQ6ZS82 235 aa9.67□□□□□ -0.86
DDB1-211ENST00000538280 FAM183BPQ6ZVS7 135 aa9.67□□□□□ -0.86
DDB1-211ENST00000538280 CENPUQ71F23 418 aa9.67□□□□□ -0.86
DDB1-211ENST00000538280 SUGP1Q8IWZ8 645 aaKnown RBP9.67□□□□□ -0.86
DDB1-211ENST00000538280 PPIL6Q8IXY8 311 aa9.67□□□□□ -0.86
DDB1-211ENST00000538280 CCDC13Q8IYE1 715 aa9.67□□□□□ -0.86
DDB1-211ENST00000538280 LRRC52Q8N7C0 313 aa9.67□□□□□ -0.86
DDB1-211ENST00000538280 TRPV1Q8NER1 839 aa9.67□□□□□ -0.86
DDB1-211ENST00000538280 DENND1AQ8TEH3 1009 aa9.67□□□□□ -0.86
DDB1-211ENST00000538280 TEKT4Q8WW24 435 aa9.67□□□□□ -0.86
DDB1-211ENST00000538280 SOCS4Q8WXH5 440 aa9.67□□□□□ -0.86
DDB1-211ENST00000538280 HAUS1Q96CS2 278 aa9.67□□□□□ -0.86
DDB1-211ENST00000538280 SGSM3Q96HU1 749 aa9.67□□□□□ -0.86
DDB1-211ENST00000538280 SNX27Q96L92 541 aa9.67□□□□□ -0.86
DDB1-211ENST00000538280 MAGEB18Q96M61 343 aa9.67□□□□□ -0.86
DDB1-211ENST00000538280 ACAP3Q96P50 834 aa9.67□□□□□ -0.86
DDB1-211ENST00000538280 APBA2Q99767 749 aa9.67□□□□□ -0.86
DDB1-211ENST00000538280 WDR83Q9BRX9 315 aaKnown RBP9.67□□□□□ -0.86
DDB1-211ENST00000538280 TMEM121Q9BTD3 319 aa9.67□□□□□ -0.86
DDB1-211ENST00000538280 SLC4A5Q9BY07 1137 aa9.67□□□□□ -0.86
DDB1-211ENST00000538280 ADAMTS10Q9H324 1103 aa9.67□□□□□ -0.86
DDB1-211ENST00000538280 TUT1Q9H6E5 874 aaKnown RBP9.67□□□□□ -0.86
DDB1-211ENST00000538280 ZWILCHQ9H900 591 aa9.67□□□□□ -0.86
DDB1-211ENST00000538280 RSAD1Q9HA92 442 aa9.67□□□□□ -0.86
DDB1-211ENST00000538280 SSU72Q9NP77 194 aaKnown RBP9.67□□□□□ -0.86
DDB1-211ENST00000538280 SENP1Q9P0U3 644 aa9.67□□□□□ -0.86
DDB1-211ENST00000538280 SAMD15Q9P1V8 674 aa9.67□□□□□ -0.86
DDB1-211ENST00000538280 TSPAN16Q9UKR8 245 aa9.67□□□□□ -0.86
DDB1-211ENST00000538280 USP18Q9UMW8 372 aa9.67□□□□□ -0.86
DDB1-211ENST00000538280 NME7Q9Y5B8 376 aa9.67□□□□□ -0.86
DDB1-211ENST00000538280 EXOC1LA0A1B0GW35 172 aa9.66□□□□□ -0.86
DDB1-211ENST00000538280 RRN3P2A6NIE6 340 aa9.66□□□□□ -0.86
DDB1-211ENST00000538280 SGK1O00141 431 aa9.66□□□□□ -0.86
DDB1-211ENST00000538280 CSDE1O75534 798 aaKnown RBP9.66□□□□□ -0.86
DDB1-211ENST00000538280 ASMTLO95671 621 aa9.66□□□□□ -0.86
DDB1-211ENST00000538280 SMPD1P17405 629 aa9.66□□□□□ -0.86
DDB1-211ENST00000538280 SCNN1AP37088 669 aa9.66□□□□□ -0.86
DDB1-211ENST00000538280 SCTRP47872 440 aa9.66□□□□□ -0.86
DDB1-211ENST00000538280 RPL34P49207 117 aaKnown RBP9.66□□□□□ -0.86
DDB1-211ENST00000538280 WDR4P57081 412 aaKnown RBP9.66□□□□□ -0.86
DDB1-211ENST00000538280 XRCC4Q13426 336 aa9.66□□□□□ -0.86
DDB1-211ENST00000538280 PCBP1Q15365 356 aaKnown RBP eCLIP9.66□□□□□ -0.86
DDB1-211ENST00000538280 TAF5Q15542 800 aa9.66□□□□□ -0.86
DDB1-211ENST00000538280 SMTNL2Q2TAL5 461 aa9.66□□□□□ -0.86
DDB1-211ENST00000538280 FAM47CQ5HY64 1035 aa9.66□□□□□ -0.86
DDB1-211ENST00000538280 C9orf50Q5SZB4 431 aa9.66□□□□□ -0.86
DDB1-211ENST00000538280 FAM102AQ5T9C2 384 aaPredicted RBP9.66□□□□□ -0.86
DDB1-211ENST00000538280 ANKRD22Q5VYY1 191 aa9.66□□□□□ -0.86
DDB1-211ENST00000538280 CGB2Q6NT52 195 aa9.66□□□□□ -0.86
DDB1-211ENST00000538280 OLFML1Q6UWY5 402 aa9.66□□□□□ -0.86
DDB1-211ENST00000538280 PPP1R21Q6ZMI0 780 aa9.66□□□□□ -0.86
DDB1-211ENST00000538280 ARHGEF18Q6ZSZ5 1173 aa9.66□□□□□ -0.86
DDB1-211ENST00000538280 RFX6Q8HWS3 928 aa9.66□□□□□ -0.86
DDB1-211ENST00000538280 UNC45BQ8IWX7 931 aa9.66□□□□□ -0.86
DDB1-211ENST00000538280 NPLOC4Q8TAT6 608 aa9.66□□□□□ -0.86
DDB1-211ENST00000538280 STK32AQ8WU08 396 aa9.66□□□□□ -0.86
DDB1-211ENST00000538280 RXFP2Q8WXD0 754 aa9.66□□□□□ -0.86
DDB1-211ENST00000538280 KHSRPQ92945 711 aaKnown RBP eCLIP9.66□□□□□ -0.86
DDB1-211ENST00000538280 FAF2Q96CS3 445 aa9.66□□□□□ -0.86
DDB1-211ENST00000538280 RTP4Q96DX8 246 aa9.66□□□□□ -0.86
DDB1-211ENST00000538280 KIF12Q96FN5 646 aa9.66□□□□□ -0.86
DDB1-211ENST00000538280 MAML3Q96JK9 1138 aa9.66□□□□□ -0.86
DDB1-211ENST00000538280 NCAPGQ9BPX3 1015 aa9.66□□□□□ -0.86
DDB1-211ENST00000538280 ELAC2Q9BQ52 826 aaKnown RBP9.66□□□□□ -0.86
DDB1-211ENST00000538280 ADPGKQ9BRR6 497 aa9.66□□□□□ -0.86
DDB1-211ENST00000538280 NT5C1AQ9BXI3 368 aa9.66□□□□□ -0.86
DDB1-211ENST00000538280 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.66□□□□□ -0.86
DDB1-211ENST00000538280 PRKAG3Q9UGI9 489 aa9.66□□□□□ -0.86
DDB1-211ENST00000538280 SLC12A4Q9UP95 1085 aa9.66□□□□□ -0.86
DDB1-211ENST00000538280 USP15Q9Y4E8 981 aaPredicted RBP9.66□□□□□ -0.86
DDB1-211ENST00000538280 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.66□□□□□ -0.86
DDB1-211ENST00000538280 SMIM35A0A1B0GVV1 85 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 MBLAC1A4D2B0 266 aaPredicted RBP9.65□□□□□ -0.86
DDB1-211ENST00000538280 FAM47DPA6NHR8 397 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 FOXO6A8MYZ6 492 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 TCP11X1B4DZS4 312 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 E5RJQ4 531 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 TYROBPO43914 113 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 GPR32O75388 356 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 TMEM63AO94886 807 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 NPTXRO95502 500 aa9.65□□□□□ -0.86
DDB1-211ENST00000538280 VIMP08670 466 aaKnown RBP9.65□□□□□ -0.86
DDB1-211ENST00000538280 TAC1P20366 129 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms