RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 WHRNQ9P202 907 aa11.26□□□□□ -0.61
CLIP1-210ENST00000538120 GGT7Q9UJ14 662 aa11.26□□□□□ -0.61
CLIP1-210ENST00000538120 IPPQ9Y573 584 aa11.26□□□□□ -0.61
CLIP1-210ENST00000538120 SCN1AP35498 2009 aa11.25□□□□□ -0.61
CLIP1-210ENST00000538120 CCT8L1PA6NM43 557 aa11.25□□□□□ -0.61
CLIP1-210ENST00000538120 PIK3R2O00459 728 aa11.25□□□□□ -0.61
CLIP1-210ENST00000538120 LIASO43766 372 aa11.25□□□□□ -0.61
CLIP1-210ENST00000538120 GNAT1P11488 350 aa11.25□□□□□ -0.61
CLIP1-210ENST00000538120 ELF1P32519 619 aa11.25□□□□□ -0.61
CLIP1-210ENST00000538120 COPS2P61201 443 aa11.25□□□□□ -0.61
CLIP1-210ENST00000538120 TRIM32Q13049 653 aa11.25□□□□□ -0.61
CLIP1-210ENST00000538120 MTA1Q13330 715 aa11.25□□□□□ -0.61
CLIP1-210ENST00000538120 HIBCHQ6NVY1 386 aaPredicted RBP11.25□□□□□ -0.61
CLIP1-210ENST00000538120 FAM183BPQ6ZVS7 135 aa11.25□□□□□ -0.61
CLIP1-210ENST00000538120 LIMS2Q7Z4I7 341 aa11.25□□□□□ -0.61
CLIP1-210ENST00000538120 PRUNE1Q86TP1 453 aa11.25□□□□□ -0.61
CLIP1-210ENST00000538120 KIRREL3Q8IZU9 778 aa11.25□□□□□ -0.61
CLIP1-210ENST00000538120 EPS8L3Q8TE67 593 aaKnown RBP11.25□□□□□ -0.61
CLIP1-210ENST00000538120 GRK7Q8WTQ7 553 aa11.25□□□□□ -0.61
CLIP1-210ENST00000538120 KBTBD7Q8WVZ9 684 aa11.25□□□□□ -0.61
CLIP1-210ENST00000538120 TBC1D31Q96DN5 1066 aa11.25□□□□□ -0.61
CLIP1-210ENST00000538120 PRMT1Q99873 361 aaKnown RBP11.25□□□□□ -0.61
CLIP1-210ENST00000538120 MTG1Q9BT17 334 aaPredicted RBP11.25□□□□□ -0.61
CLIP1-210ENST00000538120 UPF3AQ9H1J1 476 aaKnown RBP11.25□□□□□ -0.61
CLIP1-210ENST00000538120 PABPC3Q9H361 631 aaKnown RBP11.25□□□□□ -0.61
CLIP1-210ENST00000538120 DPEP3Q9H4B8 488 aa11.25□□□□□ -0.61
CLIP1-210ENST00000538120 GOLGA2P5Q9HBQ8 144 aa11.25□□□□□ -0.61
CLIP1-210ENST00000538120 TRIP12Q14669 1992 aaPredicted RBP11.25□□□□□ -0.61
CLIP1-210ENST00000538120 TRIP11Q15643 1979 aa11.25□□□□□ -0.61
CLIP1-210ENST00000538120 E5RJQ4 531 aa11.25□□□□□ -0.61
CLIP1-210ENST00000538120 PGK1P00558 417 aa11.25□□□□□ -0.61
CLIP1-210ENST00000538120 KLRC2P26717 231 aa11.25□□□□□ -0.61
CLIP1-210ENST00000538120 PSMC4P43686 418 aa11.25□□□□□ -0.61
CLIP1-210ENST00000538120 MMP13P45452 471 aa11.25□□□□□ -0.61
CLIP1-210ENST00000538120 IFNAR2P48551 515 aa11.25□□□□□ -0.61
CLIP1-210ENST00000538120 ELF3P78545 371 aaPredicted RBP11.25□□□□□ -0.61
CLIP1-210ENST00000538120 TAZQ16635 292 aa11.25□□□□□ -0.61
CLIP1-210ENST00000538120 CCDC38Q502W7 563 aa11.25□□□□□ -0.61
CLIP1-210ENST00000538120 RAB6CQ53S08 254 aa11.25□□□□□ -0.61
CLIP1-210ENST00000538120 GNASQ5JWF2 1037 aa11.25□□□□□ -0.61
CLIP1-210ENST00000538120 ZNF618Q5T7W0 954 aa11.25□□□□□ -0.61
CLIP1-210ENST00000538120 GDF6Q6KF10 455 aaPredicted RBP11.25□□□□□ -0.61
CLIP1-210ENST00000538120 PMF1Q6P1K2 205 aa11.25□□□□□ -0.61
CLIP1-210ENST00000538120 ADGRD1Q6QNK2 874 aa11.25□□□□□ -0.61
CLIP1-210ENST00000538120 CXCL17Q6UXB2 119 aa11.25□□□□□ -0.61
CLIP1-210ENST00000538120 GET4Q7L5D6 327 aaPredicted RBP11.25□□□□□ -0.61
CLIP1-210ENST00000538120 CCDC197Q8NCU1 140 aa11.25□□□□□ -0.61
CLIP1-210ENST00000538120 ELAC2Q9BQ52 826 aaKnown RBP11.25□□□□□ -0.61
CLIP1-210ENST00000538120 RAB6CQ9H0N0 254 aa11.25□□□□□ -0.61
CLIP1-210ENST00000538120 ZWILCHQ9H900 591 aa11.25□□□□□ -0.61
CLIP1-210ENST00000538120 CNOT10Q9H9A5 744 aaKnown RBP11.25□□□□□ -0.61
CLIP1-210ENST00000538120 GTF2IRD1Q9UHL9 959 aa11.25□□□□□ -0.61
CLIP1-210ENST00000538120 LRRD1A4D1F6 860 aa11.24□□□□□ -0.61
CLIP1-210ENST00000538120 MGRN1O60291 552 aa11.24□□□□□ -0.61
CLIP1-210ENST00000538120 KPNA6O60684 536 aa11.24□□□□□ -0.61
CLIP1-210ENST00000538120 TJP3O95049 919 aa11.24□□□□□ -0.61
CLIP1-210ENST00000538120 CD4P01730 458 aa11.24□□□□□ -0.61
CLIP1-210ENST00000538120 NUDT17P0C025 328 aa11.24□□□□□ -0.61
CLIP1-210ENST00000538120 ATF7P17544 494 aaPredicted RBP11.24□□□□□ -0.61
CLIP1-210ENST00000538120 ITIH2P19823 946 aa11.24□□□□□ -0.61
CLIP1-210ENST00000538120 CHKAP35790 457 aa11.24□□□□□ -0.61
CLIP1-210ENST00000538120 RGS7P49802 495 aa11.24□□□□□ -0.61
CLIP1-210ENST00000538120 EIF3BP55884 814 aaKnown RBP11.24□□□□□ -0.61
CLIP1-210ENST00000538120 NKX3-2P78367 333 aa11.24□□□□□ -0.61
CLIP1-210ENST00000538120 MRPS6P82932 125 aaKnown RBP11.24□□□□□ -0.61
CLIP1-210ENST00000538120 STILQ15468 1287 aa11.24□□□□□ -0.61
CLIP1-210ENST00000538120 TAF5Q15542 800 aa11.24□□□□□ -0.61
CLIP1-210ENST00000538120 SMTNL2Q2TAL5 461 aa11.24□□□□□ -0.61
CLIP1-210ENST00000538120 ACCSLQ4AC99 568 aa11.24□□□□□ -0.61
CLIP1-210ENST00000538120 TFDP3Q5H9I0 405 aa11.24□□□□□ -0.61
CLIP1-210ENST00000538120 KCNT1Q5JUK3 1230 aa11.24□□□□□ -0.61
CLIP1-210ENST00000538120 FAM102AQ5T9C2 384 aaPredicted RBP11.24□□□□□ -0.61
CLIP1-210ENST00000538120 SH3PXD2AQ5TCZ1 1133 aa11.24□□□□□ -0.61
CLIP1-210ENST00000538120 ARHGAP17Q68EM7 881 aa11.24□□□□□ -0.61
CLIP1-210ENST00000538120 TAF2Q6P1X5 1199 aa11.24□□□□□ -0.61
CLIP1-210ENST00000538120 DRICH1Q6PGQ1 229 aaPredicted RBP11.24□□□□□ -0.61
CLIP1-210ENST00000538120 UNC93AQ86WB7 457 aa11.24□□□□□ -0.61
CLIP1-210ENST00000538120 SLC35F5Q8WV83 523 aa11.24□□□□□ -0.61
CLIP1-210ENST00000538120 FAM49BQ9NUQ9 324 aa11.24□□□□□ -0.61
CLIP1-210ENST00000538120 GDAP2Q9NXN4 497 aa11.24□□□□□ -0.61
CLIP1-210ENST00000538120 MTRF1LQ9UGC7 380 aaKnown RBP11.24□□□□□ -0.61
CLIP1-210ENST00000538120 ASIC3Q9UHC3 531 aa11.24□□□□□ -0.61
CLIP1-210ENST00000538120 DNPEPQ9ULA0 475 aa11.24□□□□□ -0.61
CLIP1-210ENST00000538120 C2CD4BA6NLJ0 364 aa11.24□□□□□ -0.61
CLIP1-210ENST00000538120 PTGESO14684 152 aa11.24□□□□□ -0.61
CLIP1-210ENST00000538120 DNAJC8O75937 253 aaPredicted RBP11.24□□□□□ -0.61
CLIP1-210ENST00000538120 TRUB2O95900 331 aaKnown RBP11.24□□□□□ -0.61
CLIP1-210ENST00000538120 CD48P09326 243 aa11.24□□□□□ -0.61
CLIP1-210ENST00000538120 IGFBP6P24592 240 aaPredicted RBP11.24□□□□□ -0.61
CLIP1-210ENST00000538120 LMO2P25791 158 aa11.24□□□□□ -0.61
CLIP1-210ENST00000538120 MIPP30301 263 aa11.24□□□□□ -0.61
CLIP1-210ENST00000538120 CETN2P41208 172 aa11.24□□□□□ -0.61
CLIP1-210ENST00000538120 FLT3LGP49771 235 aa11.24□□□□□ -0.61
CLIP1-210ENST00000538120 ZNF143P52747 638 aaPredicted RBP11.24□□□□□ -0.61
CLIP1-210ENST00000538120 FCGRTP55899 365 aa11.24□□□□□ -0.61
CLIP1-210ENST00000538120 FAM133BQ5BKY9 247 aaKnown RBP11.24□□□□□ -0.61
CLIP1-210ENST00000538120 FBXO47Q5MNV8 452 aa11.24□□□□□ -0.61
CLIP1-210ENST00000538120 DENND2CQ68D51 928 aa11.24□□□□□ -0.61
CLIP1-210ENST00000538120 OR6B2Q6IFH4 312 aa11.24□□□□□ -0.61
CLIP1-210ENST00000538120 CYP4V2Q6ZWL3 525 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms