RNA–Protein interactions for RNA: ENST00000537739.5

HDGF-210, Transcript of heparin binding growth factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGF, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-210ENST00000537739 THP07101 528 aa27.09■■□□□ 1.93
HDGF-210ENST00000537739 PTPN1P18031 435 aaKnown RBP27.09■■□□□ 1.93
HDGF-210ENST00000537739 IBSPP21815 317 aaPredicted RBP27.09■■□□□ 1.93
HDGF-210ENST00000537739 IL4RP24394 825 aa27.09■■□□□ 1.93
HDGF-210ENST00000537739 ATXN1P54253 815 aaKnown RBP27.09■■□□□ 1.93
HDGF-210ENST00000537739 HDAC4P56524 1084 aa27.09■■□□□ 1.93
HDGF-210ENST00000537739 CA9Q16790 459 aa27.09■■□□□ 1.93
HDGF-210ENST00000537739 B4GALNT4Q76KP1 1039 aa27.09■■□□□ 1.93
HDGF-210ENST00000537739 BBOF1Q8ND07 529 aa27.09■■□□□ 1.93
HDGF-210ENST00000537739 EPS8L3Q8TE67 593 aaKnown RBP27.09■■□□□ 1.93
HDGF-210ENST00000537739 TLCD1Q96CP7 247 aa27.09■■□□□ 1.93
HDGF-210ENST00000537739 TNIP3Q96KP6 325 aa27.09■■□□□ 1.93
HDGF-210ENST00000537739 TIMM13Q9Y5L4 95 aaPredicted RBP27.09■■□□□ 1.93
HDGF-210ENST00000537739 DNALI1O14645 258 aaPredicted RBP27.08■■□□□ 1.93
HDGF-210ENST00000537739 IFNB1P01574 187 aa27.08■■□□□ 1.93
HDGF-210ENST00000537739 NOGQ13253 232 aa27.08■■□□□ 1.93
HDGF-210ENST00000537739 MRPL10Q7Z7H8 261 aaKnown RBP27.08■■□□□ 1.93
HDGF-210ENST00000537739 ZDHHC17Q8IUH5 632 aa27.08■■□□□ 1.93
HDGF-210ENST00000537739 HNRNPABQ99729 332 aaKnown RBP27.08■■□□□ 1.93
HDGF-210ENST00000537739 RSAD1Q9HA92 442 aa27.08■■□□□ 1.93
HDGF-210ENST00000537739 LPIN1Q14693 890 aa27.07■■□□□ 1.92
HDGF-210ENST00000537739 ZSCAN26Q16670 478 aa27.07■■□□□ 1.92
HDGF-210ENST00000537739 FOXR1Q6PIV2 292 aa27.07■■□□□ 1.92
HDGF-210ENST00000537739 SLC26A9Q7LBE3 791 aa27.07■■□□□ 1.92
HDGF-210ENST00000537739 C11orf84Q9BUA3 381 aaPredicted RBP27.07■■□□□ 1.92
HDGF-210ENST00000537739 MAGEB5Q9BZ81 275 aa27.07■■□□□ 1.92
HDGF-210ENST00000537739 SLC38A7Q9NVC3 462 aa27.07■■□□□ 1.92
HDGF-210ENST00000537739 CST5P28325 142 aaPredicted RBP27.07■■□□□ 1.92
HDGF-210ENST00000537739 SLCO1A2P46721 670 aa27.07■■□□□ 1.92
HDGF-210ENST00000537739 SNX16P57768 344 aa27.07■■□□□ 1.92
HDGF-210ENST00000537739 LEKR1Q6ZMV7 388 aa27.07■■□□□ 1.92
HDGF-210ENST00000537739 PIGZQ86VD9 579 aa27.07■■□□□ 1.92
HDGF-210ENST00000537739 UNC45BQ8IWX7 931 aa27.07■■□□□ 1.92
HDGF-210ENST00000537739 TTC13Q8NBP0 860 aa27.07■■□□□ 1.92
HDGF-210ENST00000537739 RNF169Q8NCN4 708 aa27.07■■□□□ 1.92
HDGF-210ENST00000537739 TMEM109Q9BVC6 243 aa27.07■■□□□ 1.92
HDGF-210ENST00000537739 RABEP2Q9H5N1 569 aa27.07■■□□□ 1.92
HDGF-210ENST00000537739 NINJ2Q9NZG7 142 aa27.07■■□□□ 1.92
HDGF-210ENST00000537739 PRDM4Q9UKN5 801 aa27.07■■□□□ 1.92
HDGF-210ENST00000537739 GIT1Q9Y2X7 761 aa27.07■■□□□ 1.92
HDGF-210ENST00000537739 CASP8AP2Q9UKL3 1982 aa27.06■■□□□ 1.92
HDGF-210ENST00000537739 CASTOR2A6NHX0 329 aa27.06■■□□□ 1.92
HDGF-210ENST00000537739 APOC4-APOC2K7ER74 178 aa27.06■■□□□ 1.92
HDGF-210ENST00000537739 TTC4O95801 387 aa27.06■■□□□ 1.92
HDGF-210ENST00000537739 APOC2P02655 101 aa27.06■■□□□ 1.92
HDGF-210ENST00000537739 FAM182AQ5T1J6 154 aa27.06■■□□□ 1.92
HDGF-210ENST00000537739 HOOK3Q86VS8 718 aa27.06■■□□□ 1.92
HDGF-210ENST00000537739 DUSP16Q9BY84 665 aa27.06■■□□□ 1.92
HDGF-210ENST00000537739 CRTAC1Q9NQ79 661 aa27.06■■□□□ 1.92
HDGF-210ENST00000537739 TPX2Q9ULW0 747 aaKnown RBP27.06■■□□□ 1.92
HDGF-210ENST00000537739 RABGGTBP53611 331 aa27.05■■□□□ 1.92
HDGF-210ENST00000537739 HNRNPH2P55795 449 aaKnown RBP27.05■■□□□ 1.92
HDGF-210ENST00000537739 IFI35P80217 286 aaPredicted RBP27.05■■□□□ 1.92
HDGF-210ENST00000537739 DSC3Q14574 896 aa27.05■■□□□ 1.92
HDGF-210ENST00000537739 BOLA3Q53S33 107 aa27.05■■□□□ 1.92
HDGF-210ENST00000537739 MDH1BQ5I0G3 518 aa27.05■■□□□ 1.92
HDGF-210ENST00000537739 ZCCHC9Q8N567 271 aaKnown RBP27.05■■□□□ 1.92
HDGF-210ENST00000537739 CCHCR1Q8TD31 782 aa27.05■■□□□ 1.92
HDGF-210ENST00000537739 HSFY1Q96LI6 401 aa27.05■■□□□ 1.92
HDGF-210ENST00000537739 SNRNP25Q9BV90 132 aaKnown RBP27.05■■□□□ 1.92
HDGF-210ENST00000537739 PCDH9Q9HC56 1237 aa27.05■■□□□ 1.92
HDGF-210ENST00000537739 DDX43Q9NXZ2 648 aaKnown RBP27.05■■□□□ 1.92
HDGF-210ENST00000537739 CALCOCO1Q9P1Z2 691 aa27.05■■□□□ 1.92
HDGF-210ENST00000537739 XPO1O14980 1071 aaKnown RBP27.05■■□□□ 1.92
HDGF-210ENST00000537739 EIF3HO15372 352 aaKnown RBP eCLIP27.05■■□□□ 1.92
HDGF-210ENST00000537739 NRLP54845 237 aa27.05■■□□□ 1.92
HDGF-210ENST00000537739 ITGA7Q13683 1181 aa27.05■■□□□ 1.92
HDGF-210ENST00000537739 TRIM71Q2Q1W2 868 aaKnown RBP27.05■■□□□ 1.92
HDGF-210ENST00000537739 HACE1Q8IYU2 909 aa27.05■■□□□ 1.92
HDGF-210ENST00000537739 CENPIQ92674 756 aaPredicted RBP27.05■■□□□ 1.92
HDGF-210ENST00000537739 PGM2Q96G03 612 aa27.05■■□□□ 1.92
HDGF-210ENST00000537739 RNF157Q96PX1 679 aa27.05■■□□□ 1.92
HDGF-210ENST00000537739 FRMD8P1Q9BZ68 369 aaPredicted RBP27.05■■□□□ 1.92
HDGF-210ENST00000537739 TSPYL1Q9H0U9 437 aa27.05■■□□□ 1.92
HDGF-210ENST00000537739 PCDH18Q9HCL0 1135 aa27.05■■□□□ 1.92
HDGF-210ENST00000537739 EIF3EP60228 445 aaKnown RBP27.04■■□□□ 1.92
HDGF-210ENST00000537739 RNASEH2BQ5TBB1 312 aaKnown RBP27.04■■□□□ 1.92
HDGF-210ENST00000537739 CAPNS2Q96L46 248 aa27.04■■□□□ 1.92
HDGF-210ENST00000537739 C9orf72Q96LT7 481 aa27.04■■□□□ 1.92
HDGF-210ENST00000537739 MAK16Q9BXY0 300 aaKnown RBP27.04■■□□□ 1.92
HDGF-210ENST00000537739 CYLDQ9NQC7 956 aa27.04■■□□□ 1.92
HDGF-210ENST00000537739 SRRDQ9UH36 339 aa27.04■■□□□ 1.92
HDGF-210ENST00000537739 SLC12A6Q9UHW9 1150 aa27.04■■□□□ 1.92
HDGF-210ENST00000537739 MDH1P40925 334 aaKnown RBP27.04■■□□□ 1.92
HDGF-210ENST00000537739 PTPN9P43378 593 aa27.04■■□□□ 1.92
HDGF-210ENST00000537739 NDUFV1P49821 464 aa27.04■■□□□ 1.92
HDGF-210ENST00000537739 KRT81Q14533 505 aa27.04■■□□□ 1.92
HDGF-210ENST00000537739 PQLC3Q8N755 202 aa27.04■■□□□ 1.92
HDGF-210ENST00000537739 SPATA18Q8TC71 538 aa27.04■■□□□ 1.92
HDGF-210ENST00000537739 CD99L2Q8TCZ2 262 aa27.04■■□□□ 1.92
HDGF-210ENST00000537739 RBM15Q96T37 977 aaKnown RBP eCLIP27.04■■□□□ 1.923e-7■□□□□ 9
HDGF-210ENST00000537739 THSD7BQ9C0I4 1608 aa27.03■■□□□ 1.92
HDGF-210ENST00000537739 ZNF623O75123 536 aa27.03■■□□□ 1.92
HDGF-210ENST00000537739 POMCP01189 267 aa27.03■■□□□ 1.92
HDGF-210ENST00000537739 RPL22P35268 128 aaKnown RBP27.03■■□□□ 1.92
HDGF-210ENST00000537739 ACADSBP45954 432 aa27.03■■□□□ 1.92
HDGF-210ENST00000537739 PPP2R2AP63151 447 aa27.03■■□□□ 1.92
HDGF-210ENST00000537739 ADCY1Q08828 1119 aa27.03■■□□□ 1.92
HDGF-210ENST00000537739 ADIGQ0VDE8 80 aa27.03■■□□□ 1.92
HDGF-210ENST00000537739 LONRF1Q17RB8 773 aa27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms